RNA–Protein interactions for RNA: ENST00000354848.5

CD46-203, Transcript of CD46 molecule, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CD46, Length 3,233 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD46-203ENST00000354848 UNKQ9C0B0 810 aaKnown RBP8.08□□□□□ -1.12
CD46-203ENST00000354848 PLAC1Q9HBJ0 212 aa8.08□□□□□ -1.12
CD46-203ENST00000354848 SACM1LQ9NTJ5 587 aa8.08□□□□□ -1.12
CD46-203ENST00000354848 TBC1D22BQ9NU19 505 aa8.08□□□□□ -1.12
CD46-203ENST00000354848 VPS28Q9UK41 221 aa8.08□□□□□ -1.12
CD46-203ENST00000354848 EMCNQ9ULC0 261 aa8.08□□□□□ -1.12
CD46-203ENST00000354848 AGTPBP1Q9UPW5 1226 aa8.08□□□□□ -1.12
CD46-203ENST00000354848 AFG3L2Q9Y4W6 797 aa8.08□□□□□ -1.12
CD46-203ENST00000354848 IQCA1LA6NCM1 817 aa8.07□□□□□ -1.12
CD46-203ENST00000354848 C3orf70A6NLC5 250 aaPredicted RBP8.07□□□□□ -1.12
CD46-203ENST00000354848 CFLARO15519 480 aa8.07□□□□□ -1.12
CD46-203ENST00000354848 CSPG5O95196 566 aa8.07□□□□□ -1.12
CD46-203ENST00000354848 FOSP01100 380 aaPredicted RBP8.07□□□□□ -1.12
CD46-203ENST00000354848 ERBB2P04626 1255 aa8.07□□□□□ -1.12
CD46-203ENST00000354848 JAK1P23458 1154 aa8.07□□□□□ -1.12
CD46-203ENST00000354848 DCKP27707 260 aa8.07□□□□□ -1.12
CD46-203ENST00000354848 HOXA13P31271 388 aaPredicted RBP8.07□□□□□ -1.12
CD46-203ENST00000354848 PRELPP51888 382 aa8.07□□□□□ -1.12
CD46-203ENST00000354848 EIF3EP60228 445 aaKnown RBP8.07□□□□□ -1.12
CD46-203ENST00000354848 SNAP25P60880 206 aa8.07□□□□□ -1.12
CD46-203ENST00000354848 GABPAQ06546 454 aa8.07□□□□□ -1.12
CD46-203ENST00000354848 GALNT2Q10471 571 aa8.07□□□□□ -1.12
CD46-203ENST00000354848 SLC10A2Q12908 348 aaPredicted RBP8.07□□□□□ -1.12
CD46-203ENST00000354848 TRIM16LQ309B1 348 aa8.07□□□□□ -1.12
CD46-203ENST00000354848 TBC1D10BQ4KMP7 808 aaPredicted RBP8.07□□□□□ -1.12
CD46-203ENST00000354848 PPM1LQ5SGD2 360 aa8.07□□□□□ -1.12
CD46-203ENST00000354848 GPR107Q5VW38 600 aa8.07□□□□□ -1.12
CD46-203ENST00000354848 ATP6V1E2Q96A05 226 aa8.07□□□□□ -1.12
CD46-203ENST00000354848 CLIP3Q96DZ5 547 aa8.07□□□□□ -1.12
CD46-203ENST00000354848 OLFM1Q99784 485 aa8.07□□□□□ -1.12
CD46-203ENST00000354848 SLC29A1Q99808 456 aa8.07□□□□□ -1.12
CD46-203ENST00000354848 NPLQ9BXD5 320 aaPredicted RBP8.07□□□□□ -1.12
CD46-203ENST00000354848 TDRD1Q9BXT4 1180 aaKnown RBP8.07□□□□□ -1.12
CD46-203ENST00000354848 SLC4A5Q9BY07 1137 aa8.07□□□□□ -1.12
CD46-203ENST00000354848 ANKRD60Q9BZ19 345 aa8.07□□□□□ -1.12
CD46-203ENST00000354848 EHD1Q9H4M9 534 aa8.07□□□□□ -1.12
CD46-203ENST00000354848 DDX56Q9NY93 547 aaKnown RBP8.07□□□□□ -1.12
CD46-203ENST00000354848 GPRC5DQ9NZD1 345 aa8.07□□□□□ -1.12
CD46-203ENST00000354848 ZC3H7BQ9UGR2 993 aaKnown RBP8.07□□□□□ -1.12
CD46-203ENST00000354848 TIMM22Q9Y584 194 aa8.07□□□□□ -1.12
CD46-203ENST00000354848 CNTNAP2Q9UHC6 1331 aa8.07□□□□□ -1.12
CD46-203ENST00000354848 SERPINE1P05121 402 aa8.07□□□□□ -1.12
CD46-203ENST00000354848 MCF2P10911 925 aa8.07□□□□□ -1.12
CD46-203ENST00000354848 TAL1P17542 331 aaPredicted RBP8.07□□□□□ -1.12
CD46-203ENST00000354848 ME2P23368 584 aa8.07□□□□□ -1.12
CD46-203ENST00000354848 DPP6P42658 865 aa8.07□□□□□ -1.12
CD46-203ENST00000354848 PCYT1AP49585 367 aa8.07□□□□□ -1.12
CD46-203ENST00000354848 YWHAZP63104 245 aaKnown RBP8.07□□□□□ -1.12
CD46-203ENST00000354848 GNA12Q03113 381 aa8.07□□□□□ -1.12
CD46-203ENST00000354848 C1QBPQ07021 282 aaKnown RBP8.07□□□□□ -1.12
CD46-203ENST00000354848 PMS2P3Q13401 168 aa8.07□□□□□ -1.12
CD46-203ENST00000354848 KCNJ11Q14654 390 aa8.07□□□□□ -1.12
CD46-203ENST00000354848 PCLAFQ15004 111 aa8.07□□□□□ -1.12
CD46-203ENST00000354848 N4BP2L1Q5TBK1 243 aaPredicted RBP8.07□□□□□ -1.12
CD46-203ENST00000354848 PADI6Q6TGC4 694 aa8.07□□□□□ -1.12
CD46-203ENST00000354848 SNX32Q86XE0 403 aa8.07□□□□□ -1.12
CD46-203ENST00000354848 ABRAQ8N0Z2 381 aa8.07□□□□□ -1.12
CD46-203ENST00000354848 PTCD2Q8WV60 388 aaKnown RBP8.07□□□□□ -1.12
CD46-203ENST00000354848 CCDC138Q96M89 665 aa8.07□□□□□ -1.12
CD46-203ENST00000354848 MCEEQ96PE7 176 aa8.07□□□□□ -1.12
CD46-203ENST00000354848 NAA50Q9GZZ1 169 aaKnown RBP8.07□□□□□ -1.12
CD46-203ENST00000354848 COG4Q9H9E3 785 aa8.07□□□□□ -1.12
CD46-203ENST00000354848 SIAEQ9HAT2 523 aa8.07□□□□□ -1.12
CD46-203ENST00000354848 POPDC2Q9HBU9 364 aa8.07□□□□□ -1.12
CD46-203ENST00000354848 VTA1Q9NP79 307 aa8.07□□□□□ -1.12
CD46-203ENST00000354848 VPS51Q9UID3 782 aa8.07□□□□□ -1.12
CD46-203ENST00000354848 B3GNT3Q9Y2A9 372 aa8.07□□□□□ -1.12
CD46-203ENST00000354848 AP4S1Q9Y587 144 aa8.07□□□□□ -1.12
CD46-203ENST00000354848 TRIM64BA6NI03 449 aa8.07□□□□□ -1.12
CD46-203ENST00000354848 FAM155AB1AL88 458 aaPredicted RBP8.07□□□□□ -1.12
CD46-203ENST00000354848 TRDMT1O14717 391 aaKnown RBP8.07□□□□□ -1.12
CD46-203ENST00000354848 ACOT8O14734 319 aa8.07□□□□□ -1.12
CD46-203ENST00000354848 HTRA2O43464 458 aaPredicted RBP8.07□□□□□ -1.12
CD46-203ENST00000354848 MAPTP10636 758 aaKnown RBP8.07□□□□□ -1.12
CD46-203ENST00000354848 IREB2P48200 963 aaKnown RBP8.07□□□□□ -1.12
CD46-203ENST00000354848 DMPKQ09013 629 aa8.07□□□□□ -1.12
CD46-203ENST00000354848 SF3B4Q15427 424 aaKnown RBP eCLIP8.07□□□□□ -1.123e-8■■■■■ 38.2
CD46-203ENST00000354848 SLC9B1Q4ZJI4 515 aa8.07□□□□□ -1.12
CD46-203ENST00000354848 TMEM26Q6ZUK4 368 aa8.07□□□□□ -1.12
CD46-203ENST00000354848 HAUS6Q7Z4H7 955 aa8.07□□□□□ -1.12
CD46-203ENST00000354848 C10orf107Q8IVU9 208 aa8.07□□□□□ -1.12
CD46-203ENST00000354848 CADM3Q8N126 398 aa8.07□□□□□ -1.12
CD46-203ENST00000354848 LRTOMTQ8WZ04 291 aa8.07□□□□□ -1.12
CD46-203ENST00000354848 HPS1Q92902 700 aa8.07□□□□□ -1.12
CD46-203ENST00000354848 CTRCQ99895 268 aa8.07□□□□□ -1.12
CD46-203ENST00000354848 LXNQ9BS40 222 aa8.07□□□□□ -1.12
CD46-203ENST00000354848 FRMD8Q9BZ67 464 aaPredicted RBP8.07□□□□□ -1.12
CD46-203ENST00000354848 CDH19Q9H159 772 aa8.07□□□□□ -1.12
CD46-203ENST00000354848 C1orf112Q9NSG2 853 aa8.07□□□□□ -1.12
CD46-203ENST00000354848 RIC8BQ9NVN3 520 aa8.07□□□□□ -1.12
CD46-203ENST00000354848 ZNF335Q9H4Z2 1342 aaPredicted RBP8.06□□□□□ -1.12
CD46-203ENST00000354848 STX16-NPEPL1H3BU86 382 aa8.06□□□□□ -1.12
CD46-203ENST00000354848 KPNA4O00629 521 aaPredicted RBP8.06□□□□□ -1.12
CD46-203ENST00000354848 APOEP02649 317 aa8.06□□□□□ -1.12
CD46-203ENST00000354848 ZNF182P17025 639 aaPredicted RBP8.06□□□□□ -1.12
CD46-203ENST00000354848 PTPN2P17706 415 aa8.06□□□□□ -1.12
CD46-203ENST00000354848 TCN1P20061 433 aaPredicted RBP8.06□□□□□ -1.12
CD46-203ENST00000354848 TCEA1P23193 301 aaKnown RBP8.06□□□□□ -1.12
CD46-203ENST00000354848 PIK3R1P27986 724 aa8.06□□□□□ -1.12
CD46-203ENST00000354848 GRM5P41594 1212 aa8.06□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms