RNA–Protein interactions for RNA: ENST00000349124.2

PTP4A3-202, Transcript of protein tyrosine phosphatase type IVA, member 3, humanhuman

TSL 1 (best) BASIC

Gene PTP4A3, Length 2,710 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A3-202ENST00000349124 TTLL4Q14679 1199 aa18.64■□□□□ 0.57
PTP4A3-202ENST00000349124 STILQ15468 1287 aa18.64■□□□□ 0.57
PTP4A3-202ENST00000349124 PACS1Q6VY07 963 aa18.64■□□□□ 0.57
PTP4A3-202ENST00000349124 ZNF483Q8TF39 744 aaPredicted RBP18.64■□□□□ 0.57
PTP4A3-202ENST00000349124 AZIN2Q96A70 460 aa18.64■□□□□ 0.57
PTP4A3-202ENST00000349124 OXCT2Q9BYC2 517 aaPredicted RBP18.64■□□□□ 0.57
PTP4A3-202ENST00000349124 CDHR5Q9HBB8 845 aa18.64■□□□□ 0.57
PTP4A3-202ENST00000349124 TMEM216Q9P0N5 145 aa18.64■□□□□ 0.57
PTP4A3-202ENST00000349124 A0A088AWK7 358 aa18.63■□□□□ 0.57
PTP4A3-202ENST00000349124 LOC100653049A0A140TA62 436 aa18.63■□□□□ 0.57
PTP4A3-202ENST00000349124 MAP3K7O43318 606 aa18.63■□□□□ 0.57
PTP4A3-202ENST00000349124 USP12O75317 370 aa18.63■□□□□ 0.57
PTP4A3-202ENST00000349124 ZMPSTE24O75844 475 aa18.63■□□□□ 0.57
PTP4A3-202ENST00000349124 KRT34O76011 436 aa18.63■□□□□ 0.57
PTP4A3-202ENST00000349124 SERPINA6P08185 405 aa18.63■□□□□ 0.57
PTP4A3-202ENST00000349124 SKIP12755 728 aa18.63■□□□□ 0.57
PTP4A3-202ENST00000349124 TPSB2P20231 275 aa18.63■□□□□ 0.57
PTP4A3-202ENST00000349124 RABGGTBP53611 331 aa18.63■□□□□ 0.57
PTP4A3-202ENST00000349124 SEMA5AQ13591 1074 aa18.63■□□□□ 0.57
PTP4A3-202ENST00000349124 TPSAB1Q15661 275 aa18.63■□□□□ 0.57
PTP4A3-202ENST00000349124 OR52E8Q6IFG1 317 aa18.63■□□□□ 0.57
PTP4A3-202ENST00000349124 LINC01465Q8N7H1 131 aa18.63■□□□□ 0.57
PTP4A3-202ENST00000349124 QKIQ96PU8 341 aaKnown RBP eCLIP18.63■□□□□ 0.57
PTP4A3-202ENST00000349124 C11orf84Q9BUA3 381 aaPredicted RBP18.63■□□□□ 0.57
PTP4A3-202ENST00000349124 MKS1Q9NXB0 559 aa18.63■□□□□ 0.57
PTP4A3-202ENST00000349124 MFSD11O43934 449 aa18.63■□□□□ 0.57
PTP4A3-202ENST00000349124 IRGCQ6NXR0 463 aa18.63■□□□□ 0.57
PTP4A3-202ENST00000349124 CMC1Q7Z7K0 106 aa18.63■□□□□ 0.57
PTP4A3-202ENST00000349124 HACE1Q8IYU2 909 aa18.63■□□□□ 0.57
PTP4A3-202ENST00000349124 TNS4Q8IZW8 715 aa18.63■□□□□ 0.57
PTP4A3-202ENST00000349124 SPDYE1Q8NFV5 336 aaPredicted RBP18.63■□□□□ 0.57
PTP4A3-202ENST00000349124 ARHGAP42A6NI28 874 aa18.62■□□□□ 0.57
PTP4A3-202ENST00000349124 PLIN3O60664 434 aa18.62■□□□□ 0.57
PTP4A3-202ENST00000349124 PDE5AO76074 875 aa18.62■□□□□ 0.57
PTP4A3-202ENST00000349124 ZCCHC18P0CG32 403 aa18.62■□□□□ 0.57
PTP4A3-202ENST00000349124 AKAP5P24588 427 aa18.62■□□□□ 0.57
PTP4A3-202ENST00000349124 PGGT1BP53609 377 aa18.62■□□□□ 0.57
PTP4A3-202ENST00000349124 ACTR3P61158 418 aa18.62■□□□□ 0.57
PTP4A3-202ENST00000349124 WASHC5Q12768 1159 aa18.62■□□□□ 0.57
PTP4A3-202ENST00000349124 ARHGAP24Q8N264 748 aa18.62■□□□□ 0.57
PTP4A3-202ENST00000349124 PPFIBP2Q8ND30 876 aa18.62■□□□□ 0.57
PTP4A3-202ENST00000349124 CCNYQ8ND76 341 aa18.62■□□□□ 0.57
PTP4A3-202ENST00000349124 PIWIL2Q8TC59 973 aaKnown RBP18.62■□□□□ 0.57
PTP4A3-202ENST00000349124 SLC16A10Q8TF71 515 aa18.62■□□□□ 0.57
PTP4A3-202ENST00000349124 TFB1MQ8WVM0 346 aaKnown RBP18.62■□□□□ 0.57
PTP4A3-202ENST00000349124 PYDC1Q8WXC3 89 aa18.62■□□□□ 0.57
PTP4A3-202ENST00000349124 SYBUQ9NX95 663 aa18.62■□□□□ 0.57
PTP4A3-202ENST00000349124 ZNF212Q9UDV6 495 aa18.62■□□□□ 0.57
PTP4A3-202ENST00000349124 A0A0G2JLL6 359 aaPredicted RBP18.62■□□□□ 0.57
PTP4A3-202ENST00000349124 BIRC5O15392 142 aa18.62■□□□□ 0.57
PTP4A3-202ENST00000349124 PSMB4P28070 264 aa18.62■□□□□ 0.57
PTP4A3-202ENST00000349124 EPHB1P54762 984 aa18.62■□□□□ 0.57
PTP4A3-202ENST00000349124 PCLAFQ15004 111 aa18.62■□□□□ 0.57
PTP4A3-202ENST00000349124 ZNF484Q5JVG2 852 aa18.62■□□□□ 0.57
PTP4A3-202ENST00000349124 FOXB2Q5VYV0 432 aa18.62■□□□□ 0.57
PTP4A3-202ENST00000349124 MTHFD1LQ6UB35 978 aa18.62■□□□□ 0.57
PTP4A3-202ENST00000349124 PRRT2Q7Z6L0 340 aaPredicted RBP18.62■□□□□ 0.57
PTP4A3-202ENST00000349124 MYLK4Q86YV6 388 aaPredicted RBP18.62■□□□□ 0.57
PTP4A3-202ENST00000349124 CCNJLQ8IV13 435 aa18.62■□□□□ 0.57
PTP4A3-202ENST00000349124 HIPK4Q8NE63 616 aa18.62■□□□□ 0.57
PTP4A3-202ENST00000349124 CENPIQ92674 756 aaPredicted RBP18.62■□□□□ 0.57
PTP4A3-202ENST00000349124 P2RY11Q96G91 374 aa18.62■□□□□ 0.57
PTP4A3-202ENST00000349124 AGAP3Q96P47 875 aa18.62■□□□□ 0.57
PTP4A3-202ENST00000349124 ZNF184Q99676 751 aaPredicted RBP18.62■□□□□ 0.57
PTP4A3-202ENST00000349124 MAN1C1Q9NR34 630 aa18.62■□□□□ 0.57
PTP4A3-202ENST00000349124 KLK14Q9P0G3 267 aa18.62■□□□□ 0.57
PTP4A3-202ENST00000349124 RGS17Q9UGC6 210 aaPredicted RBP18.62■□□□□ 0.57
PTP4A3-202ENST00000349124 SPTLC1O15269 473 aa18.61■□□□□ 0.57
PTP4A3-202ENST00000349124 SMIM24O75264 130 aa18.61■□□□□ 0.57
PTP4A3-202ENST00000349124 HOXA11P31270 313 aaPredicted RBP18.61■□□□□ 0.57
PTP4A3-202ENST00000349124 NIPAL4Q0D2K0 466 aa18.61■□□□□ 0.57
PTP4A3-202ENST00000349124 IZUMO2Q6UXV1 221 aa18.61■□□□□ 0.57
PTP4A3-202ENST00000349124 RNF111Q6ZNA4 994 aa18.61■□□□□ 0.57
PTP4A3-202ENST00000349124 TIFABQ6ZNK6 161 aa18.61■□□□□ 0.57
PTP4A3-202ENST00000349124 ARMCX2Q7L311 632 aa18.61■□□□□ 0.57
PTP4A3-202ENST00000349124 NET1Q7Z628 596 aaPredicted RBP18.61■□□□□ 0.57
PTP4A3-202ENST00000349124 FAM149B1Q96BN6 582 aa18.61■□□□□ 0.57
PTP4A3-202ENST00000349124 SORT1Q99523 831 aa18.61■□□□□ 0.57
PTP4A3-202ENST00000349124 CYP4F11Q9HBI6 524 aa18.61■□□□□ 0.57
PTP4A3-202ENST00000349124 A0A0A0MRY4 1105 aa18.61■□□□□ 0.57
PTP4A3-202ENST00000349124 C11orf97A0A1B0GVM6 126 aaPredicted RBP18.61■□□□□ 0.57
PTP4A3-202ENST00000349124 KCNK1O00180 336 aa18.61■□□□□ 0.57
PTP4A3-202ENST00000349124 RNF103O00237 685 aa18.61■□□□□ 0.57
PTP4A3-202ENST00000349124 DGKIO75912 1065 aa18.61■□□□□ 0.57
PTP4A3-202ENST00000349124 ADCYAP1R1P41586 468 aa18.61■□□□□ 0.57
PTP4A3-202ENST00000349124 SERPINB9P50453 376 aa18.61■□□□□ 0.57
PTP4A3-202ENST00000349124 RABGAP1LQ5R372 815 aa18.61■□□□□ 0.57
PTP4A3-202ENST00000349124 PLD6Q8N2A8 252 aaKnown RBP18.61■□□□□ 0.57
PTP4A3-202ENST00000349124 AGR3Q8TD06 166 aa18.61■□□□□ 0.57
PTP4A3-202ENST00000349124 CCDC124Q96CT7 223 aaKnown RBP18.61■□□□□ 0.57
PTP4A3-202ENST00000349124 SPATA13Q96N96 652 aa18.61■□□□□ 0.57
PTP4A3-202ENST00000349124 FCRL3Q96P31 734 aaPredicted RBP18.61■□□□□ 0.57
PTP4A3-202ENST00000349124 FAM49AQ9H0Q0 323 aaPredicted RBP18.61■□□□□ 0.57
PTP4A3-202ENST00000349124 GOLGA2P5Q9HBQ8 144 aa18.61■□□□□ 0.57
PTP4A3-202ENST00000349124 USP3Q9Y6I4 520 aa18.61■□□□□ 0.57
PTP4A3-202ENST00000349124 CREB3O43889 395 aa18.6■□□□□ 0.57
PTP4A3-202ENST00000349124 CIB2O75838 187 aa18.6■□□□□ 0.57
PTP4A3-202ENST00000349124 SLC25A27O95847 323 aa18.6■□□□□ 0.57
PTP4A3-202ENST00000349124 ITGA2BP08514 1039 aa18.6■□□□□ 0.57
PTP4A3-202ENST00000349124 GSTA2P09210 222 aa18.6■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms