RNA–Protein interactions for RNA: ENST00000347401.7

COL6A3-202, Transcript of collagen type VI alpha 3 chain, humanhuman

TSL 5 BASIC

Gene COL6A3, Length 8,625 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A3-202ENST00000347401 GYS1P13807 737 aa13.61□□□□□ -0.23
COL6A3-202ENST00000347401 SLC26A3P40879 764 aa13.61□□□□□ -0.23
COL6A3-202ENST00000347401 PTDSS1P48651 473 aaKnown RBP13.61□□□□□ -0.23
COL6A3-202ENST00000347401 NEK3P51956 506 aa13.61□□□□□ -0.23
COL6A3-202ENST00000347401 ARPC4P59998 168 aa13.61□□□□□ -0.23
COL6A3-202ENST00000347401 USP17L24Q0WX57 530 aa13.61□□□□□ -0.23
COL6A3-202ENST00000347401 CDH18Q13634 790 aa13.61□□□□□ -0.23
COL6A3-202ENST00000347401 USP17L6PQ6QN14 398 aa13.61□□□□□ -0.23
COL6A3-202ENST00000347401 HEATR4Q86WZ0 1026 aa13.61□□□□□ -0.23
COL6A3-202ENST00000347401 ATP6V0D2Q8N8Y2 350 aa13.61□□□□□ -0.23
COL6A3-202ENST00000347401 SGF29Q96ES7 293 aa13.61□□□□□ -0.23
COL6A3-202ENST00000347401 CINPQ9BW66 212 aaPredicted RBP13.61□□□□□ -0.23
COL6A3-202ENST00000347401 MUC3BQ9H195 1237 aa13.61□□□□□ -0.23
COL6A3-202ENST00000347401 ELOVL6Q9H5J4 265 aa13.61□□□□□ -0.23
COL6A3-202ENST00000347401 DDX18Q9NVP1 670 aaKnown RBP13.61□□□□□ -0.23
COL6A3-202ENST00000347401 PPP1R3GB7ZBB8 358 aa13.61□□□□□ -0.23
COL6A3-202ENST00000347401 PRKCBP05771 671 aa13.61□□□□□ -0.23
COL6A3-202ENST00000347401 ADORA2BP29275 332 aa13.61□□□□□ -0.23
COL6A3-202ENST00000347401 ACADVLP49748 655 aa13.61□□□□□ -0.23
COL6A3-202ENST00000347401 AGKQ53H12 422 aa13.61□□□□□ -0.23
COL6A3-202ENST00000347401 ITFG1Q8TB96 612 aa13.61□□□□□ -0.23
COL6A3-202ENST00000347401 PUS3Q9BZE2 481 aaKnown RBP13.61□□□□□ -0.23
COL6A3-202ENST00000347401 ADAM28Q9UKQ2 775 aa13.61□□□□□ -0.23
COL6A3-202ENST00000347401 USP17L10C9JJH3 530 aa13.61□□□□□ -0.23
COL6A3-202ENST00000347401 GH2P01242 217 aa13.61□□□□□ -0.23
COL6A3-202ENST00000347401 UBXN2AP68543 259 aa13.61□□□□□ -0.23
COL6A3-202ENST00000347401 ZNF844Q08AG5 666 aa13.61□□□□□ -0.23
COL6A3-202ENST00000347401 HELQQ8TDG4 1101 aa13.61□□□□□ -0.23
COL6A3-202ENST00000347401 RPS6KB2Q9UBS0 482 aa13.61□□□□□ -0.23
COL6A3-202ENST00000347401 RAB26Q9ULW5 256 aa13.61□□□□□ -0.23
COL6A3-202ENST00000347401 TNS3Q68CZ2 1445 aa13.61□□□□□ -0.23
COL6A3-202ENST00000347401 MED24O75448 989 aa13.61□□□□□ -0.23
COL6A3-202ENST00000347401 AKR1B1P15121 316 aa13.61□□□□□ -0.23
COL6A3-202ENST00000347401 PON1P27169 355 aa13.61□□□□□ -0.23
COL6A3-202ENST00000347401 RENBPP51606 427 aa13.61□□□□□ -0.23
COL6A3-202ENST00000347401 MAPK11Q15759 364 aa13.61□□□□□ -0.23
COL6A3-202ENST00000347401 GALNTL6Q49A17 601 aa13.61□□□□□ -0.23
COL6A3-202ENST00000347401 PABPC5Q96DU9 382 aaKnown RBP13.61□□□□□ -0.23
COL6A3-202ENST00000347401 COX4I2Q96KJ9 171 aa13.61□□□□□ -0.23
COL6A3-202ENST00000347401 NOS3P29474 1203 aa13.61□□□□□ -0.23
COL6A3-202ENST00000347401 ANKS6Q68DC2 871 aa13.61□□□□□ -0.23
COL6A3-202ENST00000347401 DHDDSQ86SQ9 333 aa13.61□□□□□ -0.23
COL6A3-202ENST00000347401 CRLS1Q9UJA2 301 aa13.61□□□□□ -0.23
COL6A3-202ENST00000347401 RUVBL2Q9Y230 463 aaKnown RBP13.61□□□□□ -0.23
COL6A3-202ENST00000347401 METTL21EPA6NDL7 271 aa13.6□□□□□ -0.23
COL6A3-202ENST00000347401 MGRN1O60291 552 aa13.6□□□□□ -0.23
COL6A3-202ENST00000347401 DGKIO75912 1065 aa13.6□□□□□ -0.23
COL6A3-202ENST00000347401 ALDH5A1P51649 535 aaPredicted RBP13.6□□□□□ -0.23
COL6A3-202ENST00000347401 OR2W6PQ8NHA6 318 aa13.6□□□□□ -0.23
COL6A3-202ENST00000347401 GDF3Q9NR23 364 aa13.6□□□□□ -0.23
COL6A3-202ENST00000347401 VPS45Q9NRW7 570 aa13.6□□□□□ -0.23
COL6A3-202ENST00000347401 CCDC189A1A4V9 331 aa13.6□□□□□ -0.23
COL6A3-202ENST00000347401 ECM2O94769 699 aaPredicted RBP13.6□□□□□ -0.23
COL6A3-202ENST00000347401 CAMK2GQ13555 558 aaPredicted RBP13.6□□□□□ -0.23
COL6A3-202ENST00000347401 EIF3MQ7L2H7 374 aaKnown RBP13.6□□□□□ -0.23
COL6A3-202ENST00000347401 SLC39A8Q9C0K1 460 aa13.6□□□□□ -0.23
COL6A3-202ENST00000347401 ANAPC2Q9UJX6 822 aa13.6□□□□□ -0.23
COL6A3-202ENST00000347401 A0A0X1KG70 313 aa13.6□□□□□ -0.23
COL6A3-202ENST00000347401 MDM4O15151 490 aa13.6□□□□□ -0.23
COL6A3-202ENST00000347401 ELF3P78545 371 aaPredicted RBP13.6□□□□□ -0.23
COL6A3-202ENST00000347401 DGKDQ16760 1214 aa13.6□□□□□ -0.23
COL6A3-202ENST00000347401 IER5Q5VY09 327 aa13.6□□□□□ -0.23
COL6A3-202ENST00000347401 UBE2E3Q969T4 207 aa13.6□□□□□ -0.23
COL6A3-202ENST00000347401 SLC38A2Q96QD8 506 aa13.6□□□□□ -0.23
COL6A3-202ENST00000347401 ZNF408Q9H9D4 720 aa13.6□□□□□ -0.23
COL6A3-202ENST00000347401 ICE1Q9Y2F5 2266 aa13.6□□□□□ -0.23
COL6A3-202ENST00000347401 CAMTA2O94983 1202 aa13.6□□□□□ -0.23
COL6A3-202ENST00000347401 SERPINA6P08185 405 aa13.6□□□□□ -0.23
COL6A3-202ENST00000347401 PDHBP11177 359 aa13.6□□□□□ -0.23
COL6A3-202ENST00000347401 RPS7P62081 194 aaKnown RBP13.6□□□□□ -0.23
COL6A3-202ENST00000347401 GPAT2Q6NUI2 795 aa13.6□□□□□ -0.23
COL6A3-202ENST00000347401 IGDCC4Q8TDY8 1250 aa13.6□□□□□ -0.23
COL6A3-202ENST00000347401 HPDLQ96IR7 371 aa13.6□□□□□ -0.23
COL6A3-202ENST00000347401 DNAJC16Q9Y2G8 782 aa13.6□□□□□ -0.23
COL6A3-202ENST00000347401 SSNA1O43805 119 aa13.6□□□□□ -0.23
COL6A3-202ENST00000347401 DHFRP00374 187 aa13.6□□□□□ -0.23
COL6A3-202ENST00000347401 PGAM1P18669 254 aa13.6□□□□□ -0.23
COL6A3-202ENST00000347401 CHRM3P20309 590 aa13.6□□□□□ -0.23
COL6A3-202ENST00000347401 GCLCP48506 637 aaPredicted RBP13.6□□□□□ -0.23
COL6A3-202ENST00000347401 CSNK2BP67870 215 aa13.6□□□□□ -0.23
COL6A3-202ENST00000347401 QRICH1Q2TAL8 776 aa13.6□□□□□ -0.23
COL6A3-202ENST00000347401 IPMKQ8NFU5 416 aa13.6□□□□□ -0.23
COL6A3-202ENST00000347401 PIH1D3Q9NQM4 214 aaKnown RBP13.6□□□□□ -0.23
COL6A3-202ENST00000347401 SWSAP1Q6NVH7 229 aa13.6□□□□□ -0.23
COL6A3-202ENST00000347401 PIWIL2Q8TC59 973 aaKnown RBP13.6□□□□□ -0.23
COL6A3-202ENST00000347401 TTC3P53804 2025 aa13.6□□□□□ -0.23
COL6A3-202ENST00000347401 ERBB3P21860 1342 aa13.6□□□□□ -0.23
COL6A3-202ENST00000347401 MYO3AQ8NEV4 1616 aa13.6□□□□□ -0.23
COL6A3-202ENST00000347401 PSMD12O00232 456 aaPredicted RBP13.6□□□□□ -0.23
COL6A3-202ENST00000347401 ATF6P18850 670 aa13.6□□□□□ -0.23
COL6A3-202ENST00000347401 MACC1Q6ZN28 852 aa13.6□□□□□ -0.23
COL6A3-202ENST00000347401 ZCCHC2Q9C0B9 1178 aaKnown RBP13.6□□□□□ -0.23
COL6A3-202ENST00000347401 TGDSO95455 350 aa13.59□□□□□ -0.23
COL6A3-202ENST00000347401 HOXC8P31273 242 aa13.59□□□□□ -0.23
COL6A3-202ENST00000347401 CPA2P48052 419 aa13.59□□□□□ -0.23
COL6A3-202ENST00000347401 CDC42P60953 191 aa13.59□□□□□ -0.23
COL6A3-202ENST00000347401 TUBA1BP68363 451 aa13.59□□□□□ -0.23
COL6A3-202ENST00000347401 TUBA1AQ71U36 451 aa13.59□□□□□ -0.23
COL6A3-202ENST00000347401 DCP1BQ8IZD4 617 aaKnown RBP13.59□□□□□ -0.23
COL6A3-202ENST00000347401 TEKT5Q96M29 485 aa13.59□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms