RNA–Protein interactions for RNA: ENST00000346562.6

NPAS3-201, Transcript of neuronal PAS domain protein 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene NPAS3, Length 5,847 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS3-201ENST00000346562 INTS13Q9NVM9 706 aa23.64■■□□□ 1.37
NPAS3-201ENST00000346562 PCDHGA4Q9Y5G9 962 aa23.64■■□□□ 1.37
NPAS3-201ENST00000346562 A0A087X0T9 212 aa23.64■■□□□ 1.37
NPAS3-201ENST00000346562 FAM228BP0C875 321 aa23.64■■□□□ 1.37
NPAS3-201ENST00000346562 SARSP49591 514 aaKnown RBP23.64■■□□□ 1.37
NPAS3-201ENST00000346562 TUBP50607 506 aa23.64■■□□□ 1.37
NPAS3-201ENST00000346562 ADIGQ0VDE8 80 aa23.64■■□□□ 1.37
NPAS3-201ENST00000346562 TSPAN16Q9UKR8 245 aa23.64■■□□□ 1.37
NPAS3-201ENST00000346562 POLR1DQ9Y2S0 133 aa23.64■■□□□ 1.37
NPAS3-201ENST00000346562 TRIM24O15164 1050 aa23.64■■□□□ 1.37
NPAS3-201ENST00000346562 HERVK_113P62684 666 aa23.64■■□□□ 1.37
NPAS3-201ENST00000346562 CRYMQ14894 314 aa23.64■■□□□ 1.37
NPAS3-201ENST00000346562 WDR36Q8NI36 951 aaKnown RBP23.64■■□□□ 1.37
NPAS3-201ENST00000346562 EDEM1Q92611 657 aa23.64■■□□□ 1.37
NPAS3-201ENST00000346562 SERHL2Q9H4I8 314 aa23.64■■□□□ 1.37
NPAS3-201ENST00000346562 RERGLQ9H628 205 aa23.64■■□□□ 1.37
NPAS3-201ENST00000346562 SERHLQ9NQF3 203 aa23.64■■□□□ 1.37
NPAS3-201ENST00000346562 VTI1BQ9UEU0 232 aa23.64■■□□□ 1.37
NPAS3-201ENST00000346562 PIK3CDO00329 1044 aa23.63■■□□□ 1.37
NPAS3-201ENST00000346562 ABCB1P08183 1280 aaPredicted RBP23.63■■□□□ 1.37
NPAS3-201ENST00000346562 NUMBP49757 651 aa23.63■■□□□ 1.37
NPAS3-201ENST00000346562 FAM98BQ52LJ0 330 aaKnown RBP23.63■■□□□ 1.37
NPAS3-201ENST00000346562 CASP12Q6UXS9 341 aa23.63■■□□□ 1.37
NPAS3-201ENST00000346562 FBXO39Q8N4B4 442 aa23.63■■□□□ 1.37
NPAS3-201ENST00000346562 PDCD2LQ9BRP1 358 aa23.63■■□□□ 1.37
NPAS3-201ENST00000346562 DUSP12Q9UNI6 340 aa23.63■■□□□ 1.37
NPAS3-201ENST00000346562 CXCL11O14625 94 aa23.63■■□□□ 1.37
NPAS3-201ENST00000346562 ENO2P09104 434 aaPredicted RBP23.63■■□□□ 1.37
NPAS3-201ENST00000346562 ITGB6P18564 788 aa23.63■■□□□ 1.37
NPAS3-201ENST00000346562 HPCAL1P37235 193 aa23.63■■□□□ 1.37
NPAS3-201ENST00000346562 TUFMP49411 452 aaKnown RBP23.63■■□□□ 1.37
NPAS3-201ENST00000346562 OAZ1P54368 228 aa23.63■■□□□ 1.37
NPAS3-201ENST00000346562 DDHD1Q8NEL9 900 aa23.63■■□□□ 1.37
NPAS3-201ENST00000346562 OR56A4Q8NGH8 313 aa23.63■■□□□ 1.37
NPAS3-201ENST00000346562 CELF6Q96J87 481 aaKnown RBP23.63■■□□□ 1.37
NPAS3-201ENST00000346562 BBS4Q96RK4 519 aa23.63■■□□□ 1.37
NPAS3-201ENST00000346562 UBP1Q9NZI7 540 aa23.63■■□□□ 1.37
NPAS3-201ENST00000346562 O00370 1275 aa23.63■■□□□ 1.37
NPAS3-201ENST00000346562 EPHX4Q8IUS5 362 aa23.63■■□□□ 1.37
NPAS3-201ENST00000346562 APLFQ8IW19 511 aaPredicted RBP23.63■■□□□ 1.37
NPAS3-201ENST00000346562 RTFDC1Q9BY42 306 aaPredicted RBP23.63■■□□□ 1.37
NPAS3-201ENST00000346562 KLHL3Q9UH77 587 aa23.63■■□□□ 1.37
NPAS3-201ENST00000346562 POLR2EP19388 210 aaKnown RBP23.63■■□□□ 1.37
NPAS3-201ENST00000346562 NR2C2P49116 596 aa23.63■■□□□ 1.37
NPAS3-201ENST00000346562 TMED10P49755 219 aaKnown RBP23.63■■□□□ 1.37
NPAS3-201ENST00000346562 BCL2L1Q07817 233 aa23.63■■□□□ 1.37
NPAS3-201ENST00000346562 COX10Q12887 443 aa23.63■■□□□ 1.37
NPAS3-201ENST00000346562 BOP1Q14137 746 aaKnown RBP23.63■■□□□ 1.37
NPAS3-201ENST00000346562 POU6F1Q14863 301 aa23.63■■□□□ 1.37
NPAS3-201ENST00000346562 TLK2Q86UE8 772 aa23.63■■□□□ 1.37
NPAS3-201ENST00000346562 LGI2Q8N0V4 545 aa23.63■■□□□ 1.37
NPAS3-201ENST00000346562 C19orf18Q8NEA5 215 aa23.63■■□□□ 1.37
NPAS3-201ENST00000346562 MAGEC3Q8TD91 643 aa23.63■■□□□ 1.37
NPAS3-201ENST00000346562 CRYL1Q9Y2S2 319 aa23.63■■□□□ 1.37
NPAS3-201ENST00000346562 CCDC189A1A4V9 331 aa23.62■■□□□ 1.37
NPAS3-201ENST00000346562 KLHL41O60662 606 aa23.62■■□□□ 1.37
NPAS3-201ENST00000346562 TRIM13O60858 407 aa23.62■■□□□ 1.37
NPAS3-201ENST00000346562 NDST1P52848 882 aa23.62■■□□□ 1.37
NPAS3-201ENST00000346562 SEC24CP53992 1094 aa23.62■■□□□ 1.37
NPAS3-201ENST00000346562 POLR2LP62875 67 aaKnown RBP23.62■■□□□ 1.37
NPAS3-201ENST00000346562 CYP2A13Q16696 494 aa23.62■■□□□ 1.37
NPAS3-201ENST00000346562 TYW3Q6IPR3 259 aaKnown RBP23.62■■□□□ 1.37
NPAS3-201ENST00000346562 FAM228AQ86W67 206 aa23.62■■□□□ 1.37
NPAS3-201ENST00000346562 EMC1Q8N766 993 aa23.62■■□□□ 1.37
NPAS3-201ENST00000346562 FAM45AQ8TCE6 357 aa23.62■■□□□ 1.37
NPAS3-201ENST00000346562 MFSD1Q9H3U5 465 aa23.62■■□□□ 1.37
NPAS3-201ENST00000346562 PCDH9Q9HC56 1237 aa23.62■■□□□ 1.37
NPAS3-201ENST00000346562 ZNF268Q14587 947 aaPredicted RBP23.62■■□□□ 1.37
NPAS3-201ENST00000346562 MACC1Q6ZN28 852 aa23.62■■□□□ 1.37
NPAS3-201ENST00000346562 KCNMB4Q86W47 210 aa23.62■■□□□ 1.37
NPAS3-201ENST00000346562 PRLRP16471 622 aa23.62■■□□□ 1.37
NPAS3-201ENST00000346562 PIK3CGP48736 1102 aa23.62■■□□□ 1.37
NPAS3-201ENST00000346562 CPNE1Q99829 537 aa23.62■■□□□ 1.37
NPAS3-201ENST00000346562 TAS2R13Q9NYV9 303 aa23.62■■□□□ 1.37
NPAS3-201ENST00000346562 NUDT14O95848 222 aa23.62■■□□□ 1.37
NPAS3-201ENST00000346562 IRAK1P51617 712 aa23.62■■□□□ 1.37
NPAS3-201ENST00000346562 TFAP2DQ7Z6R9 452 aa23.62■■□□□ 1.37
NPAS3-201ENST00000346562 NOA1Q8NC60 698 aaKnown RBP23.62■■□□□ 1.37
NPAS3-201ENST00000346562 REPS2Q8NFH8 660 aa23.62■■□□□ 1.37
NPAS3-201ENST00000346562 TIMM13Q9Y5L4 95 aaPredicted RBP23.62■■□□□ 1.37
NPAS3-201ENST00000346562 SETD1BQ9UPS6 1966 aaKnown RBP23.62■■□□□ 1.37
NPAS3-201ENST00000346562 MICAL2O94851 1124 aa23.62■■□□□ 1.37
NPAS3-201ENST00000346562 DDR2Q16832 855 aa23.62■■□□□ 1.37
NPAS3-201ENST00000346562 TRIT1Q9H3H1 467 aaKnown RBP23.62■■□□□ 1.37
NPAS3-201ENST00000346562 HACD1B0YJ81 288 aa23.61■■□□□ 1.37
NPAS3-201ENST00000346562 FAM20BO75063 409 aa23.61■■□□□ 1.37
NPAS3-201ENST00000346562 KATNA1O75449 491 aa23.61■■□□□ 1.37
NPAS3-201ENST00000346562 VEGFAP15692 232 aaPredicted RBP23.61■■□□□ 1.37
NPAS3-201ENST00000346562 IFNGR2P38484 337 aa23.61■■□□□ 1.37
NPAS3-201ENST00000346562 NBPF12Q5TAG4 269 aaPredicted RBP23.61■■□□□ 1.37
NPAS3-201ENST00000346562 CDC42EP4Q9H3Q1 356 aaKnown RBP23.61■■□□□ 1.37
NPAS3-201ENST00000346562 ADPRHL2Q9NX46 363 aa23.61■■□□□ 1.37
NPAS3-201ENST00000346562 UMODL1Q5DID0 1318 aa23.61■■□□□ 1.37
NPAS3-201ENST00000346562 FIGNQ5HY92 759 aa23.61■■□□□ 1.37
NPAS3-201ENST00000346562 RNFT2Q96EX2 444 aa23.61■■□□□ 1.37
NPAS3-201ENST00000346562 ZKSCAN7Q9P0L1 754 aaPredicted RBP23.61■■□□□ 1.37
NPAS3-201ENST00000346562 UQCRBP14927 111 aa23.61■■□□□ 1.37
NPAS3-201ENST00000346562 SLC45A4Q5BKX6 768 aa23.61■■□□□ 1.37
NPAS3-201ENST00000346562 FIG4Q92562 907 aa23.61■■□□□ 1.37
NPAS3-201ENST00000346562 KLHL4Q9C0H6 718 aa23.61■■□□□ 1.37
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms