RNA–Protein interactions for RNA: ENST00000345617.7

HDAC4-201, Transcript of histone deacetylase 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HDAC4, Length 8,976 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-201ENST00000345617 SLC15A2Q16348 729 aa19.81■□□□□ 0.76
HDAC4-201ENST00000345617 TTC23Q5W5X9 447 aa19.81■□□□□ 0.76
HDAC4-201ENST00000345617 SCUBE2Q9NQ36 999 aa19.81■□□□□ 0.76
HDAC4-201ENST00000345617 A0A087X1B8 175 aa19.81■□□□□ 0.76
HDAC4-201ENST00000345617 CHP2O43745 196 aa19.81■□□□□ 0.76
HDAC4-201ENST00000345617 WFS1O76024 890 aa19.81■□□□□ 0.76
HDAC4-201ENST00000345617 GLP2RO95838 553 aa19.81■□□□□ 0.76
HDAC4-201ENST00000345617 AENQ8WTP8 325 aaKnown RBP19.81■□□□□ 0.76
HDAC4-201ENST00000345617 NMRAL1Q9HBL8 299 aa19.81■□□□□ 0.76
HDAC4-201ENST00000345617 A0A0X1KG70 313 aa19.8■□□□□ 0.76
HDAC4-201ENST00000345617 ITGA2P17301 1181 aa19.8■□□□□ 0.76
HDAC4-201ENST00000345617 TYSND1Q2T9J0 566 aa19.8■□□□□ 0.76
HDAC4-201ENST00000345617 GOLGA7BQ2TAP0 167 aa19.8■□□□□ 0.76
HDAC4-201ENST00000345617 RASSF5Q8WWW0 418 aa19.8■□□□□ 0.76
HDAC4-201ENST00000345617 VPS51Q9UID3 782 aa19.8■□□□□ 0.76
HDAC4-201ENST00000345617 AGAP1Q9UPQ3 857 aa19.8■□□□□ 0.76
HDAC4-201ENST00000345617 DISP1Q96F81 1524 aa19.8■□□□□ 0.76
HDAC4-201ENST00000345617 CCDC189A1A4V9 331 aa19.8■□□□□ 0.76
HDAC4-201ENST00000345617 LDOC1O95751 146 aaPredicted RBP19.8■□□□□ 0.76
HDAC4-201ENST00000345617 PGAM1P18669 254 aa19.8■□□□□ 0.76
HDAC4-201ENST00000345617 RPA1P27694 616 aa19.8■□□□□ 0.76
HDAC4-201ENST00000345617 CDC16Q13042 620 aa19.8■□□□□ 0.76
HDAC4-201ENST00000345617 IER5Q5VY09 327 aa19.8■□□□□ 0.76
HDAC4-201ENST00000345617 DCP1BQ8IZD4 617 aaKnown RBP19.8■□□□□ 0.76
HDAC4-201ENST00000345617 NEDD1Q8NHV4 660 aa19.8■□□□□ 0.76
HDAC4-201ENST00000345617 ZNF671Q8TAW3 534 aa19.8■□□□□ 0.76
HDAC4-201ENST00000345617 SHCBP1LQ9BZQ2 653 aa19.8■□□□□ 0.76
HDAC4-201ENST00000345617 ARHGAP28Q9P2N2 729 aa19.8■□□□□ 0.76
HDAC4-201ENST00000345617 TBX20Q9UMR3 447 aa19.8■□□□□ 0.76
HDAC4-201ENST00000345617 BCS1LQ9Y276 419 aa19.8■□□□□ 0.76
HDAC4-201ENST00000345617 DYRK1BQ9Y463 629 aa19.8■□□□□ 0.76
HDAC4-201ENST00000345617 PON1P27169 355 aa19.8■□□□□ 0.76
HDAC4-201ENST00000345617 DENND5BQ6ZUT9 1274 aa19.8■□□□□ 0.76
HDAC4-201ENST00000345617 REXO1L1PQ8IX06 675 aa19.8■□□□□ 0.76
HDAC4-201ENST00000345617 RNASE11Q8TAA1 199 aaKnown RBP19.8■□□□□ 0.76
HDAC4-201ENST00000345617 GPRC5DQ9NZD1 345 aa19.8■□□□□ 0.76
HDAC4-201ENST00000345617 DSEQ9UL01 958 aa19.8■□□□□ 0.76
HDAC4-201ENST00000345617 PIN4Q9Y237 131 aaKnown RBP19.8■□□□□ 0.76
HDAC4-201ENST00000345617 EFR3BQ9Y2G0 817 aa19.8■□□□□ 0.76
HDAC4-201ENST00000345617 RIPK2O43353 540 aa19.8■□□□□ 0.76
HDAC4-201ENST00000345617 FARP2O94887 1054 aaPredicted RBP19.8■□□□□ 0.76
HDAC4-201ENST00000345617 SMIM11AP58511 58 aa19.8■□□□□ 0.76
HDAC4-201ENST00000345617 ATP6V0D2Q8N8Y2 350 aa19.8■□□□□ 0.76
HDAC4-201ENST00000345617 RAPGEFL1Q9UHV5 662 aa19.8■□□□□ 0.76
HDAC4-201ENST00000345617 ADSSP30520 456 aa19.8■□□□□ 0.76
HDAC4-201ENST00000345617 HSF2Q03933 536 aa19.8■□□□□ 0.76
HDAC4-201ENST00000345617 ALFQ53S48 1182 aa19.8■□□□□ 0.76
HDAC4-201ENST00000345617 SLFN11Q7Z7L1 901 aa19.8■□□□□ 0.76
HDAC4-201ENST00000345617 ZNF554Q86TJ5 538 aa19.8■□□□□ 0.76
HDAC4-201ENST00000345617 ZKSCAN4Q969J2 545 aaPredicted RBP19.8■□□□□ 0.76
HDAC4-201ENST00000345617 ORAI2Q96SN7 254 aa19.8■□□□□ 0.76
HDAC4-201ENST00000345617 GTF2A1LQ9UNN4 478 aa19.8■□□□□ 0.76
HDAC4-201ENST00000345617 NFICP08651 508 aa19.8■□□□□ 0.76
HDAC4-201ENST00000345617 VAV1P15498 845 aa19.8■□□□□ 0.76
HDAC4-201ENST00000345617 OGNP20774 298 aaKnown RBP19.8■□□□□ 0.76
HDAC4-201ENST00000345617 NEK3P51956 506 aa19.8■□□□□ 0.76
HDAC4-201ENST00000345617 CDC42P60953 191 aa19.8■□□□□ 0.76
HDAC4-201ENST00000345617 INTS11Q5TA45 600 aaKnown RBP19.8■□□□□ 0.76
HDAC4-201ENST00000345617 PTCD3Q96EY7 689 aaKnown RBP19.8■□□□□ 0.76
HDAC4-201ENST00000345617 DBNDD1Q9H9R9 158 aa19.8■□□□□ 0.76
HDAC4-201ENST00000345617 CHORDC1Q9UHD1 332 aaPredicted RBP19.8■□□□□ 0.76
HDAC4-201ENST00000345617 NR6A1Q15406 480 aa19.8■□□□□ 0.76
HDAC4-201ENST00000345617 A0A0B4J269 797 aa19.79■□□□□ 0.76
HDAC4-201ENST00000345617 GTF2E2P29084 291 aaKnown RBP19.79■□□□□ 0.76
HDAC4-201ENST00000345617 ZNF844Q08AG5 666 aa19.79■□□□□ 0.76
HDAC4-201ENST00000345617 TUBB3Q13509 450 aa19.79■□□□□ 0.76
HDAC4-201ENST00000345617 CDH18Q13634 790 aa19.79■□□□□ 0.76
HDAC4-201ENST00000345617 RIPOR1Q6ZS17 1223 aa19.79■□□□□ 0.76
HDAC4-201ENST00000345617 FAM126BQ8IXS8 530 aa19.79■□□□□ 0.76
HDAC4-201ENST00000345617 RERGLQ9H628 205 aa19.79■□□□□ 0.76
HDAC4-201ENST00000345617 PFDN2Q9UHV9 154 aa19.79■□□□□ 0.76
HDAC4-201ENST00000345617 ERGIC3Q9Y282 383 aa19.79■□□□□ 0.76
HDAC4-201ENST00000345617 APBA3O96018 575 aa19.79■□□□□ 0.76
HDAC4-201ENST00000345617 BAG6P46379 1132 aa19.79■□□□□ 0.76
HDAC4-201ENST00000345617 BCAT1P54687 386 aa19.79■□□□□ 0.76
HDAC4-201ENST00000345617 FAM187BQ17R55 369 aa19.79■□□□□ 0.76
HDAC4-201ENST00000345617 TCEAL5Q5H9L2 206 aa19.79■□□□□ 0.76
HDAC4-201ENST00000345617 CLN6Q9NWW5 311 aa19.79■□□□□ 0.76
HDAC4-201ENST00000345617 STK4Q13043 487 aa19.79■□□□□ 0.76
HDAC4-201ENST00000345617 KLF6Q99612 283 aaPredicted RBP19.79■□□□□ 0.76
HDAC4-201ENST00000345617 HLA-DRAP01903 254 aa19.79■□□□□ 0.76
HDAC4-201ENST00000345617 POLR2EP19388 210 aaKnown RBP19.79■□□□□ 0.76
HDAC4-201ENST00000345617 MFSD14CQ5VZR4 134 aa19.79■□□□□ 0.76
HDAC4-201ENST00000345617 OTUD5Q96G74 571 aa19.79■□□□□ 0.76
HDAC4-201ENST00000345617 CLK4Q9HAZ1 481 aaKnown RBP19.79■□□□□ 0.76
HDAC4-201ENST00000345617 KCND1Q9NSA2 647 aa19.79■□□□□ 0.76
HDAC4-201ENST00000345617 PPP1R3GB7ZBB8 358 aa19.79■□□□□ 0.76
HDAC4-201ENST00000345617 RPN2P04844 631 aa19.79■□□□□ 0.76
HDAC4-201ENST00000345617 MZF1P28698 734 aaPredicted RBP19.79■□□□□ 0.76
HDAC4-201ENST00000345617 RPL3P39023 403 aaKnown RBP19.79■□□□□ 0.76
HDAC4-201ENST00000345617 DHDDSQ86SQ9 333 aa19.79■□□□□ 0.76
HDAC4-201ENST00000345617 PSMA8Q8TAA3 256 aa19.79■□□□□ 0.76
HDAC4-201ENST00000345617 RIT2Q99578 217 aa19.79■□□□□ 0.76
HDAC4-201ENST00000345617 WDCPQ9H6R7 721 aa19.79■□□□□ 0.76
HDAC4-201ENST00000345617 JMJD4Q9H9V9 463 aa19.79■□□□□ 0.76
HDAC4-201ENST00000345617 RP1L1Q8IWN7 2480 aaPredicted RBP19.79■□□□□ 0.76
HDAC4-201ENST00000345617 ATMINO43313 823 aaPredicted RBP19.79■□□□□ 0.76
HDAC4-201ENST00000345617 CYP11B1P15538 503 aa19.79■□□□□ 0.76
HDAC4-201ENST00000345617 ALDH5A1P51649 535 aaPredicted RBP19.79■□□□□ 0.76
HDAC4-201ENST00000345617 PACS2Q86VP3 889 aa19.79■□□□□ 0.76
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms