RNA–Protein interactions for RNA: ENST00000343638.9

UBTF-202, Transcript of upstream binding transcription factor, humanhuman

TSL 1 (best) BASIC

Gene UBTF, Length 4,684 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBTF-202ENST00000343638 WDR27A2RRH5 827 aa19.42■□□□□ 0.7
UBTF-202ENST00000343638 ARL5CA6NH57 179 aa19.42■□□□□ 0.7
UBTF-202ENST00000343638 GPD2P43304 727 aa19.42■□□□□ 0.7
UBTF-202ENST00000343638 TTC27Q6P3X3 843 aa19.42■□□□□ 0.7
UBTF-202ENST00000343638 ARID3BQ8IVW6 561 aaPredicted RBP19.42■□□□□ 0.7
UBTF-202ENST00000343638 HNRNPABQ99729 332 aaKnown RBP19.42■□□□□ 0.7
UBTF-202ENST00000343638 SUN2Q9UH99 717 aa19.42■□□□□ 0.7
UBTF-202ENST00000343638 DCDC2Q9UHG0 476 aa19.42■□□□□ 0.7
UBTF-202ENST00000343638 MRPL42Q9Y6G3 142 aaKnown RBP19.42■□□□□ 0.7
UBTF-202ENST00000343638 THSD7AQ9UPZ6 1657 aa19.41■□□□□ 0.7
UBTF-202ENST00000343638 AUHQ13825 339 aaKnown RBP19.41■□□□□ 0.7
UBTF-202ENST00000343638 MRNIPQ6NTE8 343 aa19.41■□□□□ 0.7
UBTF-202ENST00000343638 SMPD4Q9NXE4 827 aa19.41■□□□□ 0.7
UBTF-202ENST00000343638 TSR3Q9UJK0 312 aaKnown RBP19.41■□□□□ 0.7
UBTF-202ENST00000343638 MTO1Q9Y2Z2 717 aaKnown RBP19.41■□□□□ 0.7
UBTF-202ENST00000343638 USP12O75317 370 aa19.41■□□□□ 0.7
UBTF-202ENST00000343638 LMO2P25791 158 aa19.41■□□□□ 0.7
UBTF-202ENST00000343638 POU6F1Q14863 301 aa19.41■□□□□ 0.7
UBTF-202ENST00000343638 ARHGAP15Q53QZ3 475 aa19.41■□□□□ 0.7
UBTF-202ENST00000343638 NUP93Q8N1F7 819 aa19.41■□□□□ 0.7
UBTF-202ENST00000343638 ULK4Q96C45 1275 aa19.41■□□□□ 0.7
UBTF-202ENST00000343638 GTF2IRD1Q9UHL9 959 aa19.41■□□□□ 0.7
UBTF-202ENST00000343638 TTLL13PA6NNM8 815 aa19.41■□□□□ 0.7
UBTF-202ENST00000343638 AMHP03971 560 aa19.41■□□□□ 0.7
UBTF-202ENST00000343638 CFHP08603 1231 aa19.41■□□□□ 0.7
UBTF-202ENST00000343638 ST8SIA6P61647 398 aa19.41■□□□□ 0.7
UBTF-202ENST00000343638 MAMDC4Q6UXC1 1216 aa19.41■□□□□ 0.7
UBTF-202ENST00000343638 ITIH5Q86UX2 942 aa19.41■□□□□ 0.7
UBTF-202ENST00000343638 CPNE8Q86YQ8 564 aa19.41■□□□□ 0.7
UBTF-202ENST00000343638 RASAL3Q86YV0 1011 aa19.41■□□□□ 0.7
UBTF-202ENST00000343638 NKD2Q969F2 451 aaPredicted RBP19.41■□□□□ 0.7
UBTF-202ENST00000343638 XRN2Q9H0D6 950 aaKnown RBP eCLIP19.41■□□□□ 0.72e-6■■■■■ 36.6
UBTF-202ENST00000343638 TBC1D13Q9NVG8 400 aa19.41■□□□□ 0.7
UBTF-202ENST00000343638 HMGXB4Q9UGU5 601 aa19.41■□□□□ 0.7
UBTF-202ENST00000343638 MYH11P35749 1972 aa19.41■□□□□ 0.7
UBTF-202ENST00000343638 CBX4O00257 560 aa19.4■□□□□ 0.7
UBTF-202ENST00000343638 PYGLP06737 847 aa19.4■□□□□ 0.7
UBTF-202ENST00000343638 ADRA1BP35368 520 aa19.4■□□□□ 0.7
UBTF-202ENST00000343638 OVGP1Q12889 678 aa19.4■□□□□ 0.7
UBTF-202ENST00000343638 ANKS3Q6ZW76 656 aa19.4■□□□□ 0.7
UBTF-202ENST00000343638 ZNF572Q7Z3I7 529 aaPredicted RBP19.4■□□□□ 0.7
UBTF-202ENST00000343638 DDI1Q8WTU0 396 aa19.4■□□□□ 0.7
UBTF-202ENST00000343638 NUF2Q9BZD4 464 aa19.4■□□□□ 0.7
UBTF-202ENST00000343638 UBE2OQ9C0C9 1292 aaKnown RBP19.4■□□□□ 0.7
UBTF-202ENST00000343638 EML4Q9HC35 981 aaKnown RBP19.4■□□□□ 0.7
UBTF-202ENST00000343638 VPS28Q9UK41 221 aa19.4■□□□□ 0.7
UBTF-202ENST00000343638 PTPRJQ12913 1337 aa19.4■□□□□ 0.7
UBTF-202ENST00000343638 SELPP16109 830 aa19.4■□□□□ 0.7
UBTF-202ENST00000343638 C1orf220Q5T0J3 134 aa19.4■□□□□ 0.7
UBTF-202ENST00000343638 LGMNQ99538 433 aa19.4■□□□□ 0.7
UBTF-202ENST00000343638 RNF39Q9H2S5 420 aa19.4■□□□□ 0.7
UBTF-202ENST00000343638 PDLIM7Q9NR12 457 aa19.4■□□□□ 0.7
UBTF-202ENST00000343638 NPY2RP49146 381 aa19.4■□□□□ 0.7
UBTF-202ENST00000343638 ALDH18A1P54886 795 aaKnown RBP19.4■□□□□ 0.7
UBTF-202ENST00000343638 FAM83EQ2M2I3 478 aa19.4■□□□□ 0.7
UBTF-202ENST00000343638 SOWAHAQ2M3V2 549 aa19.4■□□□□ 0.7
UBTF-202ENST00000343638 CARNMT1Q8N4J0 409 aa19.4■□□□□ 0.7
UBTF-202ENST00000343638 APBB2Q92870 758 aa19.4■□□□□ 0.7
UBTF-202ENST00000343638 ENTPD7Q9NQZ7 604 aa19.4■□□□□ 0.7
UBTF-202ENST00000343638 DNAJC25-GNG10A0A024R161 153 aa19.4■□□□□ 0.7
UBTF-202ENST00000343638 C2CD4BA6NLJ0 364 aa19.4■□□□□ 0.7
UBTF-202ENST00000343638 TRDMT1O14717 391 aaKnown RBP19.4■□□□□ 0.7
UBTF-202ENST00000343638 TM9SF1O15321 606 aa19.4■□□□□ 0.7
UBTF-202ENST00000343638 FGF10O15520 208 aaPredicted RBP19.4■□□□□ 0.7
UBTF-202ENST00000343638 SERPINB8P50452 374 aa19.4■□□□□ 0.7
UBTF-202ENST00000343638 NOMO1Q15155 1222 aa19.4■□□□□ 0.7
UBTF-202ENST00000343638 KBTBD12Q3ZCT8 623 aa19.4■□□□□ 0.7
UBTF-202ENST00000343638 ARHGAP17Q68EM7 881 aa19.4■□□□□ 0.7
UBTF-202ENST00000343638 SLAIN1Q8ND83 568 aa19.4■□□□□ 0.7
UBTF-202ENST00000343638 TWNKQ96RR1 684 aa19.4■□□□□ 0.7
UBTF-202ENST00000343638 CTNNAL1Q9UBT7 734 aa19.4■□□□□ 0.7
UBTF-202ENST00000343638 C2orf81A6NN90 581 aa19.39■□□□□ 0.7
UBTF-202ENST00000343638 CNMDO75829 334 aa19.39■□□□□ 0.7
UBTF-202ENST00000343638 SERPINF2P08697 491 aa19.39■□□□□ 0.7
UBTF-202ENST00000343638 POLD3Q15054 466 aaPredicted RBP19.39■□□□□ 0.7
UBTF-202ENST00000343638 SDHAF4Q5VUM1 108 aa19.39■□□□□ 0.7
UBTF-202ENST00000343638 NDRG1Q92597 394 aaKnown RBP19.39■□□□□ 0.7
UBTF-202ENST00000343638 TRIM54Q9BYV2 358 aa19.39■□□□□ 0.7
UBTF-202ENST00000343638 CYLDQ9NQC7 956 aa19.39■□□□□ 0.7
UBTF-202ENST00000343638 TRMT13Q9NUP7 481 aaKnown RBP19.39■□□□□ 0.7
UBTF-202ENST00000343638 PKP3Q9Y446 797 aa19.39■□□□□ 0.7
UBTF-202ENST00000343638 SHANK3Q9BYB0 1731 aa19.39■□□□□ 0.69
UBTF-202ENST00000343638 ERI2A8K979 691 aaKnown RBP19.39■□□□□ 0.69
UBTF-202ENST00000343638 PAPSS1O43252 624 aaPredicted RBP19.39■□□□□ 0.69
UBTF-202ENST00000343638 PSMB4P28070 264 aa19.39■□□□□ 0.69
UBTF-202ENST00000343638 GP5P40197 560 aa19.39■□□□□ 0.69
UBTF-202ENST00000343638 TAF5Q15542 800 aa19.39■□□□□ 0.69
UBTF-202ENST00000343638 DDR2Q16832 855 aa19.39■□□□□ 0.69
UBTF-202ENST00000343638 UBXN6Q9BZV1 441 aa19.39■□□□□ 0.69
UBTF-202ENST00000343638 APOA4P06727 396 aa19.39■□□□□ 0.69
UBTF-202ENST00000343638 PGAM1P18669 254 aa19.39■□□□□ 0.69
UBTF-202ENST00000343638 ATP5C1P36542 298 aaKnown RBP19.39■□□□□ 0.69
UBTF-202ENST00000343638 PURAQ00577 322 aaKnown RBP19.39■□□□□ 0.69
UBTF-202ENST00000343638 LGI2Q8N0V4 545 aa19.39■□□□□ 0.69
UBTF-202ENST00000343638 USP13Q92995 863 aaPredicted RBP19.39■□□□□ 0.69
UBTF-202ENST00000343638 NT5C1B-RDH14C9J2C7 533 aa19.39■□□□□ 0.69
UBTF-202ENST00000343638 H0Y3Z8 333 aa19.39■□□□□ 0.69
UBTF-202ENST00000343638 PTPN9P43378 593 aa19.39■□□□□ 0.69
UBTF-202ENST00000343638 SCNN1BP51168 640 aa19.39■□□□□ 0.69
UBTF-202ENST00000343638 KDSRQ06136 332 aa19.39■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms