RNA–Protein interactions for RNA: ENST00000343524.9

ATG4A-201, Transcript of autophagy related 4A cysteine peptidase, humanhuman

TSL 2

Gene ATG4A, Length 1,941 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4A-201ENST00000343524 KCND2Q9NZV8 630 aa8.35□□□□□ -1.07
ATG4A-201ENST00000343524 SUCOQ9UBS9 1254 aaKnown RBP8.35□□□□□ -1.07
ATG4A-201ENST00000343524 SRP68Q9UHB9 627 aaKnown RBP8.35□□□□□ -1.07
ATG4A-201ENST00000343524 SNCAIPQ9Y6H5 919 aa8.35□□□□□ -1.07
ATG4A-201ENST00000343524 COL5A3P25940 1745 aaPredicted RBP8.35□□□□□ -1.07
ATG4A-201ENST00000343524 NRXN2Q9P2S2 1712 aa8.35□□□□□ -1.07
ATG4A-201ENST00000343524 GOLGA8QA0A0J9YX86 632 aa8.35□□□□□ -1.07
ATG4A-201ENST00000343524 GOLGA8OA6NCC3 632 aa8.35□□□□□ -1.07
ATG4A-201ENST00000343524 GRXCR2A6NFK2 248 aa8.35□□□□□ -1.07
ATG4A-201ENST00000343524 SYCE1LA8MT33 242 aa8.35□□□□□ -1.07
ATG4A-201ENST00000343524 GOLGA8NF8WBI6 632 aa8.35□□□□□ -1.07
ATG4A-201ENST00000343524 H0YIN7 160 aa8.35□□□□□ -1.07
ATG4A-201ENST00000343524 MED24O75448 989 aa8.35□□□□□ -1.07
ATG4A-201ENST00000343524 GCATO75600 419 aa8.35□□□□□ -1.07
ATG4A-201ENST00000343524 CLPXO76031 633 aa8.35□□□□□ -1.07
ATG4A-201ENST00000343524 SGPL1O95470 568 aa8.35□□□□□ -1.07
ATG4A-201ENST00000343524 BCL10O95999 233 aa8.35□□□□□ -1.07
ATG4A-201ENST00000343524 NTRK1P04629 796 aa8.35□□□□□ -1.07
ATG4A-201ENST00000343524 TRIM49P0CI25 452 aa8.35□□□□□ -1.07
ATG4A-201ENST00000343524 TRIM49CP0CI26 452 aa8.35□□□□□ -1.07
ATG4A-201ENST00000343524 KITP10721 976 aa8.35□□□□□ -1.07
ATG4A-201ENST00000343524 CYP11B1P15538 503 aa8.35□□□□□ -1.07
ATG4A-201ENST00000343524 CNTFP26441 200 aa8.35□□□□□ -1.07
ATG4A-201ENST00000343524 MAP4P27816 1152 aaKnown RBP8.35□□□□□ -1.07
ATG4A-201ENST00000343524 ADSLP30566 484 aaPredicted RBP8.35□□□□□ -1.07
ATG4A-201ENST00000343524 SSTR1P30872 391 aa8.35□□□□□ -1.07
ATG4A-201ENST00000343524 CLK2P49760 499 aaKnown RBP8.35□□□□□ -1.07
ATG4A-201ENST00000343524 SERPINB9P50453 376 aa8.35□□□□□ -1.07
ATG4A-201ENST00000343524 BMXP51813 675 aa8.35□□□□□ -1.07
ATG4A-201ENST00000343524 MRPS22P82650 360 aaKnown RBP8.35□□□□□ -1.07
ATG4A-201ENST00000343524 GRSF1Q12849 480 aaKnown RBP eCLIP8.35□□□□□ -1.07
ATG4A-201ENST00000343524 NFX1Q12986 1120 aaKnown RBP8.35□□□□□ -1.07
ATG4A-201ENST00000343524 SUZ12Q15022 739 aaKnown RBP8.35□□□□□ -1.07
ATG4A-201ENST00000343524 CYP2A13Q16696 494 aa8.35□□□□□ -1.07
ATG4A-201ENST00000343524 FAM209AQ5JX71 171 aa8.35□□□□□ -1.07
ATG4A-201ENST00000343524 LRRC38Q5VT99 294 aa8.35□□□□□ -1.07
ATG4A-201ENST00000343524 KIAA1841Q6NSI8 718 aa8.35□□□□□ -1.07
ATG4A-201ENST00000343524 C16orf46Q6P387 395 aa8.35□□□□□ -1.07
ATG4A-201ENST00000343524 PAOXQ6QHF9 649 aa8.35□□□□□ -1.07
ATG4A-201ENST00000343524 NSMFQ6X4W1 530 aa8.35□□□□□ -1.07
ATG4A-201ENST00000343524 AGMOQ6ZNB7 445 aa8.35□□□□□ -1.07
ATG4A-201ENST00000343524 DENND5BQ6ZUT9 1274 aa8.35□□□□□ -1.07
ATG4A-201ENST00000343524 ENOSF1Q7L5Y1 443 aa8.35□□□□□ -1.07
ATG4A-201ENST00000343524 BPHLQ86WA6 291 aaPredicted RBP8.35□□□□□ -1.07
ATG4A-201ENST00000343524 HEATR4Q86WZ0 1026 aa8.35□□□□□ -1.07
ATG4A-201ENST00000343524 ELMOD1Q8N336 334 aa8.35□□□□□ -1.07
ATG4A-201ENST00000343524 SUN5Q8TC36 379 aa8.35□□□□□ -1.07
ATG4A-201ENST00000343524 HPS1Q92902 700 aa8.35□□□□□ -1.07
ATG4A-201ENST00000343524 CCDC127Q96BQ5 260 aa8.35□□□□□ -1.07
ATG4A-201ENST00000343524 NRBF2Q96F24 287 aa8.35□□□□□ -1.07
ATG4A-201ENST00000343524 WNK4Q96J92 1243 aa8.35□□□□□ -1.07
ATG4A-201ENST00000343524 YME1L1Q96TA2 773 aa8.35□□□□□ -1.07
ATG4A-201ENST00000343524 YTHDF1Q9BYJ9 559 aaKnown RBP8.35□□□□□ -1.07
ATG4A-201ENST00000343524 CDHR5Q9HBB8 845 aa8.35□□□□□ -1.07
ATG4A-201ENST00000343524 AGPAT3Q9NRZ7 376 aa8.35□□□□□ -1.07
ATG4A-201ENST00000343524 MRGBPQ9NV56 204 aa8.35□□□□□ -1.07
ATG4A-201ENST00000343524 MARCOQ9UEW3 520 aaPredicted RBP8.35□□□□□ -1.07
ATG4A-201ENST00000343524 RNF11Q9Y3C5 154 aa8.35□□□□□ -1.07
ATG4A-201ENST00000343524 CPQQ9Y646 472 aa8.35□□□□□ -1.07
ATG4A-201ENST00000343524 CYP3A7-CYP3A51PA0A087WV96 503 aa8.34□□□□□ -1.07
ATG4A-201ENST00000343524 ILVBLA1L0T0 632 aa8.34□□□□□ -1.07
ATG4A-201ENST00000343524 FAM172BPA6NC97 362 aa8.34□□□□□ -1.07
ATG4A-201ENST00000343524 TRIM49D1C9J1S8 452 aa8.34□□□□□ -1.07
ATG4A-201ENST00000343524 CLDN25C9JDP6 229 aa8.34□□□□□ -1.07
ATG4A-201ENST00000343524 SGK1O00141 431 aa8.34□□□□□ -1.07
ATG4A-201ENST00000343524 DEAF1O75398 565 aaPredicted RBP8.34□□□□□ -1.07
ATG4A-201ENST00000343524 MTRF1O75570 445 aaKnown RBP8.34□□□□□ -1.07
ATG4A-201ENST00000343524 BCAS2O75934 225 aaPredicted RBP8.34□□□□□ -1.07
ATG4A-201ENST00000343524 UFL1O94874 794 aa8.34□□□□□ -1.07
ATG4A-201ENST00000343524 CHRNB1P11230 501 aa8.34□□□□□ -1.07
ATG4A-201ENST00000343524 ME2P23368 584 aa8.34□□□□□ -1.07
ATG4A-201ENST00000343524 CYP3A7P24462 503 aa8.34□□□□□ -1.07
ATG4A-201ENST00000343524 CRHR1P34998 444 aa8.34□□□□□ -1.07
ATG4A-201ENST00000343524 GPC3P51654 580 aa8.34□□□□□ -1.07
ATG4A-201ENST00000343524 HK2P52789 917 aa8.34□□□□□ -1.07
ATG4A-201ENST00000343524 CBLBQ13191 982 aa8.34□□□□□ -1.07
ATG4A-201ENST00000343524 ITGADQ13349 1161 aa8.34□□□□□ -1.07
ATG4A-201ENST00000343524 TUBA3CQ13748 450 aa8.34□□□□□ -1.07
ATG4A-201ENST00000343524 PPP2R5DQ14738 602 aa8.34□□□□□ -1.07
ATG4A-201ENST00000343524 ARHGEF6Q15052 776 aa8.34□□□□□ -1.07
ATG4A-201ENST00000343524 C6orf10Q5SRN2 563 aa8.34□□□□□ -1.07
ATG4A-201ENST00000343524 PPP2R2DQ66LE6 453 aa8.34□□□□□ -1.07
ATG4A-201ENST00000343524 ANKRD26P1Q6NSI1 321 aa8.34□□□□□ -1.07
ATG4A-201ENST00000343524 TTC33Q6PID6 262 aaPredicted RBP8.34□□□□□ -1.07
ATG4A-201ENST00000343524 TRIM72Q6ZMU5 477 aa8.34□□□□□ -1.07
ATG4A-201ENST00000343524 GADL1Q6ZQY3 521 aa8.34□□□□□ -1.07
ATG4A-201ENST00000343524 LYSMD3Q7Z3D4 306 aa8.34□□□□□ -1.07
ATG4A-201ENST00000343524 ARHGEF19Q8IW93 802 aa8.34□□□□□ -1.07
ATG4A-201ENST00000343524 PGAM4Q8N0Y7 254 aa8.34□□□□□ -1.07
ATG4A-201ENST00000343524 UBR7Q8N806 425 aa8.34□□□□□ -1.07
ATG4A-201ENST00000343524 TMEM102Q8N9M5 508 aaPredicted RBP8.34□□□□□ -1.07
ATG4A-201ENST00000343524 SNX31Q8N9S9 440 aa8.34□□□□□ -1.07
ATG4A-201ENST00000343524 SPERTQ8NA61 448 aa8.34□□□□□ -1.07
ATG4A-201ENST00000343524 KYQ8NBH2 561 aa8.34□□□□□ -1.07
ATG4A-201ENST00000343524 HELQQ8TDG4 1101 aa8.34□□□□□ -1.07
ATG4A-201ENST00000343524 RAB2BQ8WUD1 216 aa8.34□□□□□ -1.07
ATG4A-201ENST00000343524 STON2Q8WXE9 905 aa8.34□□□□□ -1.07
ATG4A-201ENST00000343524 DHX38Q92620 1227 aaKnown RBP8.34□□□□□ -1.07
ATG4A-201ENST00000343524 NSUN4Q96CB9 384 aaKnown RBP8.34□□□□□ -1.07
ATG4A-201ENST00000343524 CLIP3Q96DZ5 547 aa8.34□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms