RNA–Protein interactions for RNA: ENST00000342887.1

CFAP54-201, Transcript of cilia and flagella associated protein 54, humanhuman

TSL 2

Gene CFAP54, Length 3,686 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CFAP54-201ENST00000342887 RFWD3Q6PCD5 774 aa8.36□□□□□ -1.07
CFAP54-201ENST00000342887 TRMT10BQ6PF06 316 aaKnown RBP8.36□□□□□ -1.07
CFAP54-201ENST00000342887 ZBTB33Q86T24 672 aa8.36□□□□□ -1.07
CFAP54-201ENST00000342887 CCNJLQ8IV13 435 aa8.36□□□□□ -1.07
CFAP54-201ENST00000342887 APLFQ8IW19 511 aaPredicted RBP8.36□□□□□ -1.07
CFAP54-201ENST00000342887 KBTBD2Q8IY47 623 aa8.36□□□□□ -1.07
CFAP54-201ENST00000342887 PELI3Q8N2H9 469 aa8.36□□□□□ -1.07
CFAP54-201ENST00000342887 FBXO27Q8NI29 283 aa8.36□□□□□ -1.07
CFAP54-201ENST00000342887 VOPP1Q96AW1 172 aa8.36□□□□□ -1.07
CFAP54-201ENST00000342887 CPB2Q96IY4 423 aa8.36□□□□□ -1.07
CFAP54-201ENST00000342887 FCRL3Q96P31 734 aaPredicted RBP8.36□□□□□ -1.07
CFAP54-201ENST00000342887 SRPK1Q96SB4 655 aaKnown RBP8.36□□□□□ -1.07
CFAP54-201ENST00000342887 DUSP16Q9BY84 665 aa8.36□□□□□ -1.07
CFAP54-201ENST00000342887 STX18Q9P2W9 335 aaKnown RBP8.36□□□□□ -1.07
CFAP54-201ENST00000342887 CORO1CQ9ULV4 474 aaPredicted RBP8.36□□□□□ -1.07
CFAP54-201ENST00000342887 CTDP1Q9Y5B0 961 aaPredicted RBP8.36□□□□□ -1.07
CFAP54-201ENST00000342887 PCDHGA4Q9Y5G9 962 aa8.36□□□□□ -1.07
CFAP54-201ENST00000342887 MICAL3Q7RTP6 2002 aa8.36□□□□□ -1.07
CFAP54-201ENST00000342887 A8MXQ7 604 aa8.36□□□□□ -1.07
CFAP54-201ENST00000342887 M0QZQ0 153 aa8.36□□□□□ -1.07
CFAP54-201ENST00000342887 TNFRSF10BO14763 440 aa8.36□□□□□ -1.07
CFAP54-201ENST00000342887 AVILO75366 819 aa8.36□□□□□ -1.07
CFAP54-201ENST00000342887 SERPINA6P08185 405 aa8.36□□□□□ -1.07
CFAP54-201ENST00000342887 CYP2F1P24903 491 aa8.36□□□□□ -1.07
CFAP54-201ENST00000342887 GBE1Q04446 702 aa8.36□□□□□ -1.07
CFAP54-201ENST00000342887 ACVR1Q04771 509 aa8.36□□□□□ -1.07
CFAP54-201ENST00000342887 GOLGA7BQ2TAP0 167 aa8.36□□□□□ -1.07
CFAP54-201ENST00000342887 TAF1BQ53T94 588 aaPredicted RBP8.36□□□□□ -1.07
CFAP54-201ENST00000342887 CHSY3Q70JA7 882 aa8.36□□□□□ -1.07
CFAP54-201ENST00000342887 TMEM126BQ8IUX1 230 aa8.36□□□□□ -1.07
CFAP54-201ENST00000342887 CCDC114Q96M63 670 aa8.36□□□□□ -1.07
CFAP54-201ENST00000342887 SLC52A3Q9NQ40 469 aa8.36□□□□□ -1.07
CFAP54-201ENST00000342887 CDKN2AIPQ9NXV6 580 aaPredicted RBP8.36□□□□□ -1.07
CFAP54-201ENST00000342887 BEST1O76090 585 aa8.36□□□□□ -1.07
CFAP54-201ENST00000342887 ZFXP17010 805 aaPredicted RBP8.36□□□□□ -1.07
CFAP54-201ENST00000342887 HTR7P34969 479 aa8.36□□□□□ -1.07
CFAP54-201ENST00000342887 FDFT1P37268 417 aa8.36□□□□□ -1.07
CFAP54-201ENST00000342887 POLD2P49005 469 aa8.36□□□□□ -1.07
CFAP54-201ENST00000342887 HK2P52789 917 aa8.36□□□□□ -1.07
CFAP54-201ENST00000342887 PDE1CQ14123 709 aaPredicted RBP8.36□□□□□ -1.07
CFAP54-201ENST00000342887 PTK2BQ14289 1009 aa8.36□□□□□ -1.07
CFAP54-201ENST00000342887 FXNQ16595 210 aa8.36□□□□□ -1.07
CFAP54-201ENST00000342887 ACSBG2Q5FVE4 666 aa8.36□□□□□ -1.07
CFAP54-201ENST00000342887 ANKRD20A2Q5SQ80 823 aa8.36□□□□□ -1.07
CFAP54-201ENST00000342887 TSTD2Q5T7W7 516 aa8.36□□□□□ -1.07
CFAP54-201ENST00000342887 ANKRD20A1Q5TYW2 823 aa8.36□□□□□ -1.07
CFAP54-201ENST00000342887 ANKRD20A3Q5VUR7 823 aa8.36□□□□□ -1.07
CFAP54-201ENST00000342887 FOXB2Q5VYV0 432 aa8.36□□□□□ -1.07
CFAP54-201ENST00000342887 CLEC20AQ6ZU45 233 aa8.36□□□□□ -1.07
CFAP54-201ENST00000342887 IRGQQ8WZA9 623 aa8.36□□□□□ -1.07
CFAP54-201ENST00000342887 SMC6Q96SB8 1091 aa8.36□□□□□ -1.07
CFAP54-201ENST00000342887 SLX1AQ9BQ83 275 aa8.36□□□□□ -1.07
CFAP54-201ENST00000342887 ARNT2Q9HBZ2 717 aa8.36□□□□□ -1.07
CFAP54-201ENST00000342887 TMEM165Q9HC07 324 aa8.36□□□□□ -1.07
CFAP54-201ENST00000342887 XAB2Q9HCS7 855 aaKnown RBP8.36□□□□□ -1.07
CFAP54-201ENST00000342887 TREX1Q9NSU2 369 aa8.36□□□□□ -1.07
CFAP54-201ENST00000342887 ZNF148Q9UQR1 794 aa8.36□□□□□ -1.07
CFAP54-201ENST00000342887 APOL1O14791 398 aa8.35□□□□□ -1.07
CFAP54-201ENST00000342887 PLIN3O60664 434 aa8.35□□□□□ -1.07
CFAP54-201ENST00000342887 USP1O94782 785 aa8.35□□□□□ -1.07
CFAP54-201ENST00000342887 LINGO3P0C6S8 592 aa8.35□□□□□ -1.07
CFAP54-201ENST00000342887 HSPA1AP0DMV8 641 aaKnown RBP8.35□□□□□ -1.07
CFAP54-201ENST00000342887 HSPA1BP0DMV9 641 aaKnown RBP8.35□□□□□ -1.07
CFAP54-201ENST00000342887 IGFBP6P24592 240 aaPredicted RBP8.35□□□□□ -1.07
CFAP54-201ENST00000342887 MAGEA10P43363 369 aaPredicted RBP8.35□□□□□ -1.07
CFAP54-201ENST00000342887 ACADSBP45954 432 aa8.35□□□□□ -1.07
CFAP54-201ENST00000342887 CXCR3P49682 368 aa8.35□□□□□ -1.07
CFAP54-201ENST00000342887 BCAT1P54687 386 aa8.35□□□□□ -1.07
CFAP54-201ENST00000342887 FKBP1BP68106 108 aa8.35□□□□□ -1.07
CFAP54-201ENST00000342887 TIAL1Q01085 375 aaKnown RBP eCLIP8.35□□□□□ -1.07
CFAP54-201ENST00000342887 PTK7Q13308 1070 aa8.35□□□□□ -1.07
CFAP54-201ENST00000342887 CYHR1Q6ZMK1 362 aa8.35□□□□□ -1.07
CFAP54-201ENST00000342887 MFSD6LQ8IWD5 586 aa8.35□□□□□ -1.07
CFAP54-201ENST00000342887 ARHGAP12Q8IWW6 846 aa8.35□□□□□ -1.07
CFAP54-201ENST00000342887 UHMK1Q8TAS1 419 aaKnown RBP8.35□□□□□ -1.07
CFAP54-201ENST00000342887 HMGCLL1Q8TB92 370 aa8.35□□□□□ -1.07
CFAP54-201ENST00000342887 FAM172AQ8WUF8 416 aa8.35□□□□□ -1.07
CFAP54-201ENST00000342887 BRI3BPQ8WY22 251 aa8.35□□□□□ -1.07
CFAP54-201ENST00000342887 CCDC77Q9BR77 488 aa8.35□□□□□ -1.07
CFAP54-201ENST00000342887 TUBB6Q9BUF5 446 aa8.35□□□□□ -1.07
CFAP54-201ENST00000342887 KIFC1Q9BW19 673 aa8.35□□□□□ -1.07
CFAP54-201ENST00000342887 CENPHQ9H3R5 247 aa8.35□□□□□ -1.07
CFAP54-201ENST00000342887 FNIP2Q9P278 1114 aa8.35□□□□□ -1.07
CFAP54-201ENST00000342887 SMIM28A0A1B0GU29 152 aa8.35□□□□□ -1.07
CFAP54-201ENST00000342887 RRN3P2A6NIE6 340 aa8.35□□□□□ -1.07
CFAP54-201ENST00000342887 SPAG7O75391 227 aa8.35□□□□□ -1.07
CFAP54-201ENST00000342887 STK10O94804 968 aaKnown RBP8.35□□□□□ -1.07
CFAP54-201ENST00000342887 PENKP01210 267 aaPredicted RBP8.35□□□□□ -1.07
CFAP54-201ENST00000342887 TXNP10599 105 aaKnown RBP8.35□□□□□ -1.07
CFAP54-201ENST00000342887 MYL4P12829 197 aa8.35□□□□□ -1.07
CFAP54-201ENST00000342887 KRT15P19012 456 aa8.35□□□□□ -1.07
CFAP54-201ENST00000342887 SERPINB9P50453 376 aa8.35□□□□□ -1.07
CFAP54-201ENST00000342887 ACTR3P61158 418 aa8.35□□□□□ -1.07
CFAP54-201ENST00000342887 IHHQ14623 411 aa8.35□□□□□ -1.07
CFAP54-201ENST00000342887 FAM110CQ1W6H9 321 aa8.35□□□□□ -1.07
CFAP54-201ENST00000342887 ZNF618Q5T7W0 954 aa8.35□□□□□ -1.07
CFAP54-201ENST00000342887 NET1Q7Z628 596 aaPredicted RBP8.35□□□□□ -1.07
CFAP54-201ENST00000342887 C4orf33Q8N1A6 199 aa8.35□□□□□ -1.07
CFAP54-201ENST00000342887 NPWQ8N729 165 aa8.35□□□□□ -1.07
CFAP54-201ENST00000342887 GDAP1Q8TB36 358 aa8.35□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms