RNA–Protein interactions for RNA: ENST00000342785.8

VCAN-202, Transcript of versican, humanhuman

TSL 1 (best) BASIC

Gene VCAN, Length 7,154 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-202ENST00000342785 RRN3Q9NYV6 651 aa7.37□□□□□ -1.23
VCAN-202ENST00000342785 GPRC5DQ9NZD1 345 aa7.37□□□□□ -1.23
VCAN-202ENST00000342785 CD274Q9NZQ7 290 aa7.37□□□□□ -1.23
VCAN-202ENST00000342785 LMO7Q8WWI1 1683 aa7.37□□□□□ -1.23
VCAN-202ENST00000342785 PDHXO00330 501 aa7.37□□□□□ -1.23
VCAN-202ENST00000342785 PSMG1O95456 288 aa7.37□□□□□ -1.23
VCAN-202ENST00000342785 PSMB4P28070 264 aa7.37□□□□□ -1.23
VCAN-202ENST00000342785 SKIV2L2P42285 1042 aaKnown RBP7.37□□□□□ -1.23
VCAN-202ENST00000342785 NPY2RP49146 381 aa7.37□□□□□ -1.23
VCAN-202ENST00000342785 CYP1B1Q16678 543 aa7.37□□□□□ -1.23
VCAN-202ENST00000342785 GRTP1Q5TC63 336 aa7.37□□□□□ -1.23
VCAN-202ENST00000342785 RNF219Q5W0B1 726 aaPredicted RBP7.37□□□□□ -1.23
VCAN-202ENST00000342785 ZNF470Q6ECI4 717 aa7.37□□□□□ -1.23
VCAN-202ENST00000342785 IYDQ6PHW0 289 aa7.37□□□□□ -1.23
VCAN-202ENST00000342785 PPP1R3FQ6ZSY5 799 aaPredicted RBP7.37□□□□□ -1.23
VCAN-202ENST00000342785 ANKRD52Q8NB46 1076 aa7.37□□□□□ -1.23
VCAN-202ENST00000342785 SPDYE1Q8NFV5 336 aaPredicted RBP7.37□□□□□ -1.23
VCAN-202ENST00000342785 PPP1R13LQ8WUF5 828 aa7.37□□□□□ -1.23
VCAN-202ENST00000342785 SNX19Q92543 992 aa7.37□□□□□ -1.23
VCAN-202ENST00000342785 GAD1Q99259 594 aa7.37□□□□□ -1.23
VCAN-202ENST00000342785 C12orf65Q9H3J6 166 aaKnown RBP7.37□□□□□ -1.23
VCAN-202ENST00000342785 CACYBPQ9HB71 228 aaKnown RBP7.37□□□□□ -1.23
VCAN-202ENST00000342785 PCDH18Q9HCL0 1135 aa7.37□□□□□ -1.23
VCAN-202ENST00000342785 NT5MQ9NPB1 228 aa7.37□□□□□ -1.23
VCAN-202ENST00000342785 ZC3H4Q9UPT8 1303 aaKnown RBP7.37□□□□□ -1.23
VCAN-202ENST00000342785 MEI4A8MW99 385 aa7.37□□□□□ -1.23
VCAN-202ENST00000342785 UBDO15205 165 aa7.37□□□□□ -1.23
VCAN-202ENST00000342785 GPR182O15218 404 aa7.37□□□□□ -1.23
VCAN-202ENST00000342785 PEX10O60683 326 aa7.37□□□□□ -1.23
VCAN-202ENST00000342785 KCNK10P57789 538 aa7.37□□□□□ -1.23
VCAN-202ENST00000342785 OCA2Q04671 838 aa7.37□□□□□ -1.23
VCAN-202ENST00000342785 NOMO1Q15155 1222 aa7.37□□□□□ -1.23
VCAN-202ENST00000342785 CCDC153Q494R4 210 aa7.37□□□□□ -1.23
VCAN-202ENST00000342785 AGKQ53H12 422 aa7.37□□□□□ -1.23
VCAN-202ENST00000342785 DCAF12L1Q5VU92 463 aa7.37□□□□□ -1.23
VCAN-202ENST00000342785 UNC5AQ6ZN44 842 aa7.37□□□□□ -1.23
VCAN-202ENST00000342785 LRRC74BQ6ZQY2 392 aa7.37□□□□□ -1.23
VCAN-202ENST00000342785 SNX32Q86XE0 403 aa7.37□□□□□ -1.23
VCAN-202ENST00000342785 ATP6V0D2Q8N8Y2 350 aa7.37□□□□□ -1.23
VCAN-202ENST00000342785 USP13Q92995 863 aaPredicted RBP7.37□□□□□ -1.23
VCAN-202ENST00000342785 SENP8Q96LD8 212 aa7.37□□□□□ -1.23
VCAN-202ENST00000342785 GCNAQ96QF7 691 aa7.37□□□□□ -1.23
VCAN-202ENST00000342785 VAT1Q99536 393 aa7.37□□□□□ -1.23
VCAN-202ENST00000342785 APBA2Q99767 749 aa7.37□□□□□ -1.23
VCAN-202ENST00000342785 PKD2L2Q9NZM6 624 aa7.37□□□□□ -1.23
VCAN-202ENST00000342785 CELF2O95319 508 aaKnown RBP7.37□□□□□ -1.23
VCAN-202ENST00000342785 PIGNO95427 931 aa7.37□□□□□ -1.23
VCAN-202ENST00000342785 ARL2P36404 184 aa7.37□□□□□ -1.23
VCAN-202ENST00000342785 EFEMP1Q12805 493 aa7.37□□□□□ -1.23
VCAN-202ENST00000342785 NFE2Q16621 373 aaPredicted RBP7.37□□□□□ -1.23
VCAN-202ENST00000342785 RNASEH2BQ5TBB1 312 aaKnown RBP7.37□□□□□ -1.23
VCAN-202ENST00000342785 MARC1Q5VT66 337 aa7.37□□□□□ -1.23
VCAN-202ENST00000342785 OVOS1Q6IE37 1185 aa7.37□□□□□ -1.23
VCAN-202ENST00000342785 RFWD2Q8NHY2 731 aa7.37□□□□□ -1.23
VCAN-202ENST00000342785 BRD8Q9H0E9 1235 aa7.37□□□□□ -1.23
VCAN-202ENST00000342785 XPNPEP3Q9NQH7 507 aa7.37□□□□□ -1.23
VCAN-202ENST00000342785 RIC8BQ9NVN3 520 aa7.37□□□□□ -1.23
VCAN-202ENST00000342785 MRPL42Q9Y6G3 142 aaKnown RBP7.37□□□□□ -1.23
VCAN-202ENST00000342785 H2AFYO75367 372 aaKnown RBP7.36□□□□□ -1.23
VCAN-202ENST00000342785 SOAT2O75908 522 aa7.36□□□□□ -1.23
VCAN-202ENST00000342785 EPHX2P34913 555 aa7.36□□□□□ -1.23
VCAN-202ENST00000342785 SLC25A3Q00325 362 aa7.36□□□□□ -1.23
VCAN-202ENST00000342785 WSCD1Q658N2 575 aa7.36□□□□□ -1.23
VCAN-202ENST00000342785 TIGD7Q6NT04 549 aaPredicted RBP7.36□□□□□ -1.23
VCAN-202ENST00000342785 PTAR1Q7Z6K3 402 aaPredicted RBP7.36□□□□□ -1.23
VCAN-202ENST00000342785 CLNKQ7Z7G1 428 aa7.36□□□□□ -1.23
VCAN-202ENST00000342785 C1orf127Q8N9H9 656 aa7.36□□□□□ -1.23
VCAN-202ENST00000342785 FAM13CQ8NE31 585 aa7.36□□□□□ -1.23
VCAN-202ENST00000342785 SH3TC2Q8TF17 1288 aa7.36□□□□□ -1.23
VCAN-202ENST00000342785 PPP2R3CQ969Q6 453 aa7.36□□□□□ -1.23
VCAN-202ENST00000342785 CPNE1Q99829 537 aa7.36□□□□□ -1.23
VCAN-202ENST00000342785 B3GNT5Q9BYG0 378 aa7.36□□□□□ -1.23
VCAN-202ENST00000342785 V9GYQ6 96 aa7.36□□□□□ -1.23
VCAN-202ENST00000342785 ERI2A8K979 691 aaKnown RBP7.36□□□□□ -1.23
VCAN-202ENST00000342785 KRT36O76013 467 aa7.36□□□□□ -1.23
VCAN-202ENST00000342785 GOT1P17174 413 aa7.36□□□□□ -1.23
VCAN-202ENST00000342785 RIPK1Q13546 671 aa7.36□□□□□ -1.23
VCAN-202ENST00000342785 TCHHL1Q5QJ38 904 aaPredicted RBP7.36□□□□□ -1.23
VCAN-202ENST00000342785 MAP1SQ66K74 1059 aaPredicted RBP7.36□□□□□ -1.23
VCAN-202ENST00000342785 PTRHD1Q6GMV3 140 aaKnown RBP7.36□□□□□ -1.23
VCAN-202ENST00000342785 TMC7Q7Z402 723 aa7.36□□□□□ -1.23
VCAN-202ENST00000342785 NETO2Q8NC67 525 aa7.36□□□□□ -1.23
VCAN-202ENST00000342785 PHF21BQ96EK2 531 aa7.36□□□□□ -1.23
VCAN-202ENST00000342785 GLT1D1Q96MS3 346 aa7.36□□□□□ -1.23
VCAN-202ENST00000342785 ASPSCR1Q9BZE9 553 aa7.36□□□□□ -1.23
VCAN-202ENST00000342785 RUBCNLQ9H714 662 aa7.36□□□□□ -1.23
VCAN-202ENST00000342785 PDGFCQ9NRA1 345 aa7.36□□□□□ -1.23
VCAN-202ENST00000342785 PTPN1P18031 435 aaKnown RBP7.36□□□□□ -1.23
VCAN-202ENST00000342785 ERCC2P18074 760 aa7.36□□□□□ -1.23
VCAN-202ENST00000342785 PTDSS1P48651 473 aaKnown RBP7.36□□□□□ -1.23
VCAN-202ENST00000342785 GBE1Q04446 702 aa7.36□□□□□ -1.23
VCAN-202ENST00000342785 ZRANB3Q5FWF4 1079 aa7.36□□□□□ -1.23
VCAN-202ENST00000342785 SPANXN3Q5MJ09 141 aa7.36□□□□□ -1.23
VCAN-202ENST00000342785 PPP1R26Q5T8A7 1209 aaPredicted RBP7.36□□□□□ -1.23
VCAN-202ENST00000342785 ANKRD22Q5VYY1 191 aa7.36□□□□□ -1.23
VCAN-202ENST00000342785 IRGCQ6NXR0 463 aa7.36□□□□□ -1.23
VCAN-202ENST00000342785 TAF2Q6P1X5 1199 aa7.36□□□□□ -1.23
VCAN-202ENST00000342785 CERS2Q96G23 380 aa7.36□□□□□ -1.23
VCAN-202ENST00000342785 CDRT15Q96T59 188 aa7.36□□□□□ -1.23
VCAN-202ENST00000342785 NIFKQ9BYG3 293 aaKnown RBP7.36□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms