RNA–Protein interactions for RNA: ENST00000342075.8

PMS1-201, Transcript of PMS1 homolog 1, mismatch repair system component, humanhuman

TSL 2

Gene PMS1, Length 3,012 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1-201ENST00000342075 HYAL1Q12794 435 aa14.37□□□□□ -0.11
PMS1-201ENST00000342075 SEMA3BQ13214 749 aa14.37□□□□□ -0.11
PMS1-201ENST00000342075 SNX30Q5VWJ9 437 aa14.37□□□□□ -0.11
PMS1-201ENST00000342075 RAP1GAP2Q684P5 730 aa14.37□□□□□ -0.11
PMS1-201ENST00000342075 RWDD4Q6NW29 188 aaKnown RBP14.37□□□□□ -0.11
PMS1-201ENST00000342075 GLIS1Q8NBF1 620 aa14.37□□□□□ -0.11
PMS1-201ENST00000342075 ACTL9Q8TC94 416 aa14.37□□□□□ -0.11
PMS1-201ENST00000342075 ADAMTS19Q8TE59 1207 aa14.37□□□□□ -0.11
PMS1-201ENST00000342075 MAGOHBQ96A72 148 aaKnown RBP14.37□□□□□ -0.11
PMS1-201ENST00000342075 MRPL38Q96DV4 380 aaKnown RBP14.37□□□□□ -0.11
PMS1-201ENST00000342075 ZSWIM3Q96MP5 696 aa14.37□□□□□ -0.11
PMS1-201ENST00000342075 SLC46A2Q9BY10 475 aa14.37□□□□□ -0.11
PMS1-201ENST00000342075 ANKZF1Q9H8Y5 726 aa14.37□□□□□ -0.11
PMS1-201ENST00000342075 COMMD8Q9NX08 183 aa14.37□□□□□ -0.11
PMS1-201ENST00000342075 RRN3Q9NYV6 651 aa14.37□□□□□ -0.11
PMS1-201ENST00000342075 DNMT3LQ9UJW3 386 aa14.37□□□□□ -0.11
PMS1-201ENST00000342075 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP14.36□□□□□ -0.11
PMS1-201ENST00000342075 DLX2Q07687 328 aaPredicted RBP14.36□□□□□ -0.11
PMS1-201ENST00000342075 TRIP13Q15645 432 aaPredicted RBP14.36□□□□□ -0.11
PMS1-201ENST00000342075 EP400NLQ6ZTU2 488 aa14.36□□□□□ -0.11
PMS1-201ENST00000342075 ZC3H18Q86VM9 953 aaKnown RBP14.36□□□□□ -0.11
PMS1-201ENST00000342075 DENND1CQ8IV53 801 aa14.36□□□□□ -0.11
PMS1-201ENST00000342075 ELMOD1Q8N336 334 aa14.36□□□□□ -0.11
PMS1-201ENST00000342075 NPWQ8N729 165 aa14.36□□□□□ -0.11
PMS1-201ENST00000342075 PDZD8Q8NEN9 1154 aa14.36□□□□□ -0.11
PMS1-201ENST00000342075 ITFG1Q8TB96 612 aa14.36□□□□□ -0.11
PMS1-201ENST00000342075 NTAN1Q96AB6 310 aa14.36□□□□□ -0.11
PMS1-201ENST00000342075 P2RY11Q96G91 374 aa14.36□□□□□ -0.11
PMS1-201ENST00000342075 TRIM62Q9BVG3 475 aa14.36□□□□□ -0.11
PMS1-201ENST00000342075 CPQQ9Y646 472 aa14.36□□□□□ -0.11
PMS1-201ENST00000342075 SHROOM3Q8TF72 1996 aa14.36□□□□□ -0.11
PMS1-201ENST00000342075 EEF2KO00418 725 aaKnown RBP14.36□□□□□ -0.11
PMS1-201ENST00000342075 CKMP06732 381 aa14.36□□□□□ -0.11
PMS1-201ENST00000342075 HDCP19113 662 aa14.36□□□□□ -0.11
PMS1-201ENST00000342075 SCAPQ12770 1279 aa14.36□□□□□ -0.11
PMS1-201ENST00000342075 KCNC3Q14003 757 aa14.36□□□□□ -0.11
PMS1-201ENST00000342075 ADGRE1Q14246 886 aa14.36□□□□□ -0.11
PMS1-201ENST00000342075 TRIP4Q15650 581 aaPredicted RBP14.36□□□□□ -0.11
PMS1-201ENST00000342075 MS4A13Q5J8X5 152 aa14.36□□□□□ -0.11
PMS1-201ENST00000342075 NCBP2-AS2Q69YL0 99 aa14.36□□□□□ -0.11
PMS1-201ENST00000342075 RFX8Q6ZV50 586 aa14.36□□□□□ -0.11
PMS1-201ENST00000342075 BHMTQ93088 406 aa14.36□□□□□ -0.11
PMS1-201ENST00000342075 DCLK3Q9C098 648 aa14.36□□□□□ -0.11
PMS1-201ENST00000342075 EFCAB8A8MWE9 144 aa14.36□□□□□ -0.11
PMS1-201ENST00000342075 MFSD11O43934 449 aa14.36□□□□□ -0.11
PMS1-201ENST00000342075 STC2O76061 302 aa14.36□□□□□ -0.11
PMS1-201ENST00000342075 IGLV3-27P01718 113 aa14.36□□□□□ -0.11
PMS1-201ENST00000342075 SLC6A4P31645 630 aa14.36□□□□□ -0.11
PMS1-201ENST00000342075 SGSHP51688 502 aa14.36□□□□□ -0.11
PMS1-201ENST00000342075 PDK2Q15119 407 aa14.36□□□□□ -0.11
PMS1-201ENST00000342075 PPP2R5EQ16537 467 aa14.36□□□□□ -0.11
PMS1-201ENST00000342075 ARL13BQ3SXY8 428 aa14.36□□□□□ -0.11
PMS1-201ENST00000342075 RARS2Q5T160 578 aaKnown RBP14.36□□□□□ -0.11
PMS1-201ENST00000342075 CCDC137Q6PK04 289 aaKnown RBP14.36□□□□□ -0.11
PMS1-201ENST00000342075 GSPT2Q8IYD1 628 aaKnown RBP14.36□□□□□ -0.11
PMS1-201ENST00000342075 CFAP52Q8N1V2 620 aa14.36□□□□□ -0.11
PMS1-201ENST00000342075 MICALL1Q8N3F8 863 aa14.36□□□□□ -0.11
PMS1-201ENST00000342075 TAB3Q8N5C8 712 aaPredicted RBP14.36□□□□□ -0.11
PMS1-201ENST00000342075 FAM71BQ8TC56 605 aa14.36□□□□□ -0.11
PMS1-201ENST00000342075 CEP295NLQ96MC4 621 aa14.36□□□□□ -0.11
PMS1-201ENST00000342075 MAK16Q9BXY0 300 aaKnown RBP14.36□□□□□ -0.11
PMS1-201ENST00000342075 TRIM31Q9BZY9 425 aa14.36□□□□□ -0.11
PMS1-201ENST00000342075 SLITRK6Q9H5Y7 841 aa14.36□□□□□ -0.11
PMS1-201ENST00000342075 RNF14Q9UBS8 474 aa14.36□□□□□ -0.11
PMS1-201ENST00000342075 DOCK4Q8N1I0 1966 aa14.35□□□□□ -0.11
PMS1-201ENST00000342075 CTIFO43310 598 aaKnown RBP14.35□□□□□ -0.11
PMS1-201ENST00000342075 CNTN5O94779 1100 aa14.35□□□□□ -0.11
PMS1-201ENST00000342075 TJP3O95049 919 aa14.35□□□□□ -0.11
PMS1-201ENST00000342075 ETS1P14921 441 aa14.35□□□□□ -0.11
PMS1-201ENST00000342075 CEBPBP17676 345 aa14.35□□□□□ -0.11
PMS1-201ENST00000342075 EPHB2P29323 1055 aa14.35□□□□□ -0.11
PMS1-201ENST00000342075 GDF10P55107 478 aa14.35□□□□□ -0.11
PMS1-201ENST00000342075 TPI1P60174 286 aa14.35□□□□□ -0.11
PMS1-201ENST00000342075 MLLT1Q03111 559 aaPredicted RBP14.35□□□□□ -0.11
PMS1-201ENST00000342075 BBS12Q6ZW61 710 aa14.35□□□□□ -0.11
PMS1-201ENST00000342075 PDZD4Q76G19 769 aaPredicted RBP14.35□□□□□ -0.11
PMS1-201ENST00000342075 TFAP2DQ7Z6R9 452 aa14.35□□□□□ -0.11
PMS1-201ENST00000342075 TRAF3IP1Q8TDR0 691 aaPredicted RBP14.35□□□□□ -0.11
PMS1-201ENST00000342075 OVCA2Q8WZ82 227 aa14.35□□□□□ -0.11
PMS1-201ENST00000342075 UBXN4Q92575 508 aa14.35□□□□□ -0.11
PMS1-201ENST00000342075 IGSF8Q969P0 613 aa14.35□□□□□ -0.11
PMS1-201ENST00000342075 CELF6Q96J87 481 aaKnown RBP14.35□□□□□ -0.11
PMS1-201ENST00000342075 ZNF670Q9BS34 389 aa14.35□□□□□ -0.11
PMS1-201ENST00000342075 TMEM121Q9BTD3 319 aa14.35□□□□□ -0.11
PMS1-201ENST00000342075 OLA1Q9NTK5 396 aaKnown RBP14.35□□□□□ -0.11
PMS1-201ENST00000342075 UXTQ9UBK9 157 aaPredicted RBP14.35□□□□□ -0.11
PMS1-201ENST00000342075 MAFFQ9ULX9 164 aa14.35□□□□□ -0.11
PMS1-201ENST00000342075 ERCC2P18074 760 aa14.35□□□□□ -0.11
PMS1-201ENST00000342075 CORO1AP31146 461 aaKnown RBP14.35□□□□□ -0.11
PMS1-201ENST00000342075 DPYSQ14117 519 aa14.35□□□□□ -0.11
PMS1-201ENST00000342075 PPP2R5DQ14738 602 aa14.35□□□□□ -0.11
PMS1-201ENST00000342075 PABPC1LQ4VXU2 614 aaKnown RBP14.35□□□□□ -0.11
PMS1-201ENST00000342075 GPR158Q5T848 1215 aa14.35□□□□□ -0.11
PMS1-201ENST00000342075 SMG7Q92540 1137 aaKnown RBP14.35□□□□□ -0.11
PMS1-201ENST00000342075 FAF2Q96CS3 445 aa14.35□□□□□ -0.11
PMS1-201ENST00000342075 KLF16Q9BXK1 252 aaPredicted RBP14.35□□□□□ -0.11
PMS1-201ENST00000342075 PRKD2Q9BZL6 878 aa14.35□□□□□ -0.11
PMS1-201ENST00000342075 SLTMQ9NWH9 1034 aaKnown RBP eCLIP14.35□□□□□ -0.11
PMS1-201ENST00000342075 ASB3Q9Y575 518 aa14.35□□□□□ -0.11
PMS1-201ENST00000342075 PHF2O75151 1096 aa14.34□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms