RNA–Protein interactions for RNA: ENST00000341990.8

CNTNAP3B-202, Transcript of contactin associated protein like 3B, humanhuman

TSL 2 BASIC

Gene CNTNAP3B, Length 2,666 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNTNAP3B-202ENST00000341990 PDE1BQ01064 536 aa20.55■□□□□ 0.88
CNTNAP3B-202ENST00000341990 PCLAFQ15004 111 aa20.55■□□□□ 0.88
CNTNAP3B-202ENST00000341990 STILQ15468 1287 aa20.55■□□□□ 0.88
CNTNAP3B-202ENST00000341990 TRMT5Q32P41 509 aaKnown RBP20.55■□□□□ 0.88
CNTNAP3B-202ENST00000341990 IZUMO2Q6UXV1 221 aa20.55■□□□□ 0.88
CNTNAP3B-202ENST00000341990 TIFABQ6ZNK6 161 aa20.55■□□□□ 0.88
CNTNAP3B-202ENST00000341990 C10orf107Q8IVU9 208 aa20.55■□□□□ 0.88
CNTNAP3B-202ENST00000341990 LINC01465Q8N7H1 131 aa20.55■□□□□ 0.88
CNTNAP3B-202ENST00000341990 RAB3IL1Q8TBN0 382 aa20.55■□□□□ 0.88
CNTNAP3B-202ENST00000341990 ARNTL2Q8WYA1 636 aa20.55■□□□□ 0.88
CNTNAP3B-202ENST00000341990 GJD2Q9UKL4 321 aa20.55■□□□□ 0.88
CNTNAP3B-202ENST00000341990 CSADQ9Y600 493 aa20.55■□□□□ 0.88
CNTNAP3B-202ENST00000341990 BPTFQ12830 3046 aa20.54■□□□□ 0.88
CNTNAP3B-202ENST00000341990 SMIM24O75264 130 aa20.54■□□□□ 0.88
CNTNAP3B-202ENST00000341990 GTF2A2P52657 109 aa20.54■□□□□ 0.88
CNTNAP3B-202ENST00000341990 NIPAL4Q0D2K0 466 aa20.54■□□□□ 0.88
CNTNAP3B-202ENST00000341990 PEX6Q13608 980 aa20.54■□□□□ 0.88
CNTNAP3B-202ENST00000341990 RABGAP1LQ5R372 815 aa20.54■□□□□ 0.88
CNTNAP3B-202ENST00000341990 FOXB2Q5VYV0 432 aa20.54■□□□□ 0.88
CNTNAP3B-202ENST00000341990 DPY19L2Q6NUT2 758 aa20.54■□□□□ 0.88
CNTNAP3B-202ENST00000341990 KYAT3Q6YP21 454 aaKnown RBP20.54■□□□□ 0.88
CNTNAP3B-202ENST00000341990 MFSD11O43934 449 aa20.54■□□□□ 0.88
CNTNAP3B-202ENST00000341990 PLIN3O60664 434 aa20.54■□□□□ 0.88
CNTNAP3B-202ENST00000341990 ARHGAP1Q07960 439 aa20.54■□□□□ 0.88
CNTNAP3B-202ENST00000341990 DNAL1Q4LDG9 190 aa20.54■□□□□ 0.88
CNTNAP3B-202ENST00000341990 MOB2Q70IA6 237 aa20.54■□□□□ 0.88
CNTNAP3B-202ENST00000341990 WDR75Q8IWA0 830 aaKnown RBP20.54■□□□□ 0.88
CNTNAP3B-202ENST00000341990 TP53INP2Q8IXH6 220 aa20.54■□□□□ 0.88
CNTNAP3B-202ENST00000341990 COLGALT1Q8NBJ5 622 aa20.54■□□□□ 0.88
CNTNAP3B-202ENST00000341990 TFB1MQ8WVM0 346 aaKnown RBP20.54■□□□□ 0.88
CNTNAP3B-202ENST00000341990 MPHOSPH6Q99547 160 aaKnown RBP20.54■□□□□ 0.88
CNTNAP3B-202ENST00000341990 SCOCQ9UIL1 159 aa20.54■□□□□ 0.88
CNTNAP3B-202ENST00000341990 ANGPTL2Q9UKU9 493 aa20.54■□□□□ 0.88
CNTNAP3B-202ENST00000341990 ALDH1A2O94788 518 aa20.53■□□□□ 0.88
CNTNAP3B-202ENST00000341990 AOC1P19801 751 aa20.53■□□□□ 0.88
CNTNAP3B-202ENST00000341990 PITX1P78337 314 aaPredicted RBP20.53■□□□□ 0.88
CNTNAP3B-202ENST00000341990 TMEM62Q0P6H9 643 aa20.53■□□□□ 0.88
CNTNAP3B-202ENST00000341990 TTLL4Q14679 1199 aa20.53■□□□□ 0.88
CNTNAP3B-202ENST00000341990 STEAP4Q687X5 459 aa20.53■□□□□ 0.88
CNTNAP3B-202ENST00000341990 PPP1R13LQ8WUF5 828 aa20.53■□□□□ 0.88
CNTNAP3B-202ENST00000341990 GATA6Q92908 595 aa20.53■□□□□ 0.88
CNTNAP3B-202ENST00000341990 ATXN7L3BQ96GX2 97 aa20.53■□□□□ 0.88
CNTNAP3B-202ENST00000341990 SNTG2Q9NY99 539 aa20.53■□□□□ 0.88
CNTNAP3B-202ENST00000341990 SEPT10Q9P0V9 454 aa20.53■□□□□ 0.88
CNTNAP3B-202ENST00000341990 SOX13Q9UN79 622 aa20.53■□□□□ 0.88
CNTNAP3B-202ENST00000341990 ASB3Q9Y575 518 aa20.53■□□□□ 0.88
CNTNAP3B-202ENST00000341990 ZNF638Q14966 1978 aaKnown RBP20.53■□□□□ 0.88
CNTNAP3B-202ENST00000341990 SYNJ2BP-COX16A0A087WUM0 186 aa20.53■□□□□ 0.88
CNTNAP3B-202ENST00000341990 A0A0A0MRY4 1105 aa20.53■□□□□ 0.88
CNTNAP3B-202ENST00000341990 ARHGAP42A6NI28 874 aa20.53■□□□□ 0.88
CNTNAP3B-202ENST00000341990 ADM5C9JUS6 153 aa20.53■□□□□ 0.88
CNTNAP3B-202ENST00000341990 STAU1O95793 577 aaKnown RBP20.53■□□□□ 0.88
CNTNAP3B-202ENST00000341990 ERVK-10P10266 1014 aa20.53■□□□□ 0.88
CNTNAP3B-202ENST00000341990 LMO2P25791 158 aa20.53■□□□□ 0.88
CNTNAP3B-202ENST00000341990 MLH1P40692 756 aa20.53■□□□□ 0.88
CNTNAP3B-202ENST00000341990 PTPN9P43378 593 aa20.53■□□□□ 0.88
CNTNAP3B-202ENST00000341990 CACNA2D1P54289 1103 aa20.53■□□□□ 0.88
CNTNAP3B-202ENST00000341990 IRX1P78414 480 aaPredicted RBP20.53■□□□□ 0.88
CNTNAP3B-202ENST00000341990 MARK2Q7KZI7 788 aaKnown RBP20.53■□□□□ 0.88
CNTNAP3B-202ENST00000341990 PYDC1Q8WXC3 89 aa20.53■□□□□ 0.88
CNTNAP3B-202ENST00000341990 CENPIQ92674 756 aaPredicted RBP20.53■□□□□ 0.88
CNTNAP3B-202ENST00000341990 SPATA13Q96N96 652 aa20.53■□□□□ 0.88
CNTNAP3B-202ENST00000341990 SORT1Q99523 831 aa20.53■□□□□ 0.88
CNTNAP3B-202ENST00000341990 SYBUQ9NX95 663 aa20.53■□□□□ 0.88
CNTNAP3B-202ENST00000341990 COX16Q9P0S2 106 aa20.53■□□□□ 0.88
CNTNAP3B-202ENST00000341990 USP3Q9Y6I4 520 aa20.53■□□□□ 0.88
CNTNAP3B-202ENST00000341990 BRCA1P38398 1863 aaKnown RBP20.53■□□□□ 0.88
CNTNAP3B-202ENST00000341990 SIN3BO75182 1162 aa20.52■□□□□ 0.88
CNTNAP3B-202ENST00000341990 PDE5AO76074 875 aa20.52■□□□□ 0.88
CNTNAP3B-202ENST00000341990 NR2C2P49116 596 aa20.52■□□□□ 0.88
CNTNAP3B-202ENST00000341990 ZNF484Q5JVG2 852 aa20.52■□□□□ 0.88
CNTNAP3B-202ENST00000341990 ZNF618Q5T7W0 954 aa20.52■□□□□ 0.88
CNTNAP3B-202ENST00000341990 CMC1Q7Z7K0 106 aa20.52■□□□□ 0.88
CNTNAP3B-202ENST00000341990 IFNLR1Q8IU57 520 aaPredicted RBP20.52■□□□□ 0.88
CNTNAP3B-202ENST00000341990 EFCAB3Q8N7B9 438 aa20.52■□□□□ 0.88
CNTNAP3B-202ENST00000341990 IFT43Q96FT9 208 aa20.52■□□□□ 0.88
CNTNAP3B-202ENST00000341990 OLFM3Q96PB7 478 aa20.52■□□□□ 0.88
CNTNAP3B-202ENST00000341990 OXCT2Q9BYC2 517 aaPredicted RBP20.52■□□□□ 0.88
CNTNAP3B-202ENST00000341990 VCXQ9H320 206 aa20.52■□□□□ 0.88
CNTNAP3B-202ENST00000341990 NDE1Q9NXR1 346 aa20.52■□□□□ 0.88
CNTNAP3B-202ENST00000341990 TMEM216Q9P0N5 145 aa20.52■□□□□ 0.88
CNTNAP3B-202ENST00000341990 RNF103O00237 685 aa20.52■□□□□ 0.88
CNTNAP3B-202ENST00000341990 DGKIO75912 1065 aa20.52■□□□□ 0.88
CNTNAP3B-202ENST00000341990 ITGA2BP08514 1039 aa20.52■□□□□ 0.88
CNTNAP3B-202ENST00000341990 PSMB4P28070 264 aa20.52■□□□□ 0.88
CNTNAP3B-202ENST00000341990 POU5F1BQ06416 359 aa20.52■□□□□ 0.88
CNTNAP3B-202ENST00000341990 CDK18Q07002 472 aa20.52■□□□□ 0.88
CNTNAP3B-202ENST00000341990 LRRC36Q1X8D7 754 aa20.52■□□□□ 0.88
CNTNAP3B-202ENST00000341990 C6orf163Q5TEZ5 329 aa20.52■□□□□ 0.88
CNTNAP3B-202ENST00000341990 C4orf22Q6V702 233 aa20.52■□□□□ 0.88
CNTNAP3B-202ENST00000341990 RAPH1Q70E73 1250 aa20.52■□□□□ 0.88
CNTNAP3B-202ENST00000341990 SLC26A9Q7LBE3 791 aa20.52■□□□□ 0.88
CNTNAP3B-202ENST00000341990 CCNJLQ8IV13 435 aa20.52■□□□□ 0.88
CNTNAP3B-202ENST00000341990 SLC16A10Q8TF71 515 aa20.52■□□□□ 0.88
CNTNAP3B-202ENST00000341990 TSC22D3Q99576 134 aa20.52■□□□□ 0.88
CNTNAP3B-202ENST00000341990 A0A0G2JLL6 359 aaPredicted RBP20.51■□□□□ 0.87
CNTNAP3B-202ENST00000341990 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP20.51■□□□□ 0.87
CNTNAP3B-202ENST00000341990 PPP1R12AO14974 1030 aaPredicted RBP20.51■□□□□ 0.87
CNTNAP3B-202ENST00000341990 ZCCHC18P0CG32 403 aa20.51■□□□□ 0.87
CNTNAP3B-202ENST00000341990 DESP17661 470 aa20.51■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms