RNA–Protein interactions for RNA: ENST00000341372.7

TPM3-207, Transcript of tropomyosin 3, humanhuman

TSL 5 BASIC

Gene TPM3, Length 2,007 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-207ENST00000341372 PIP5K1CO60331 668 aa10.78□□□□□ -0.68
TPM3-207ENST00000341372 KIF11P52732 1056 aa10.78□□□□□ -0.68
TPM3-207ENST00000341372 BCAT1P54687 386 aa10.78□□□□□ -0.68
TPM3-207ENST00000341372 STILQ15468 1287 aa10.78□□□□□ -0.68
TPM3-207ENST00000341372 HSP90AA4PQ58FG1 418 aa10.78□□□□□ -0.68
TPM3-207ENST00000341372 RAB41Q5JT25 222 aa10.78□□□□□ -0.68
TPM3-207ENST00000341372 CWF19L1Q69YN2 538 aaKnown RBP10.78□□□□□ -0.68
TPM3-207ENST00000341372 CREBRFQ8IUR6 639 aa10.78□□□□□ -0.68
TPM3-207ENST00000341372 ZNF687Q8N1G0 1237 aa10.78□□□□□ -0.68
TPM3-207ENST00000341372 FBXL6Q8N531 539 aa10.78□□□□□ -0.68
TPM3-207ENST00000341372 KIAA1958Q8N8K9 716 aa10.78□□□□□ -0.68
TPM3-207ENST00000341372 BPIFB1Q8TDL5 484 aa10.78□□□□□ -0.68
TPM3-207ENST00000341372 TFAP2BQ92481 460 aa10.78□□□□□ -0.68
TPM3-207ENST00000341372 SHC3Q92529 594 aa10.78□□□□□ -0.68
TPM3-207ENST00000341372 IRF7Q92985 503 aa10.78□□□□□ -0.68
TPM3-207ENST00000341372 FBXO32Q969P5 355 aa10.78□□□□□ -0.68
TPM3-207ENST00000341372 SLC22A12Q96S37 553 aa10.78□□□□□ -0.68
TPM3-207ENST00000341372 ZSWIM1Q9BR11 485 aa10.78□□□□□ -0.68
TPM3-207ENST00000341372 DHRS4Q9BTZ2 278 aa10.78□□□□□ -0.68
TPM3-207ENST00000341372 DDX23Q9BUQ8 820 aaKnown RBP10.78□□□□□ -0.68
TPM3-207ENST00000341372 TDP1Q9NUW8 608 aa10.78□□□□□ -0.68
TPM3-207ENST00000341372 TSPAN16Q9UKR8 245 aa10.78□□□□□ -0.68
TPM3-207ENST00000341372 FBXL21Q9UKT6 434 aa10.78□□□□□ -0.68
TPM3-207ENST00000341372 ARHGAP26Q9UNA1 814 aa10.78□□□□□ -0.68
TPM3-207ENST00000341372 SCML2Q9UQR0 700 aa10.78□□□□□ -0.68
TPM3-207ENST00000341372 CCL26Q9Y258 94 aa10.78□□□□□ -0.68
TPM3-207ENST00000341372 COL4A3Q01955 1670 aa10.78□□□□□ -0.68
TPM3-207ENST00000341372 PDGFBP01127 241 aaPredicted RBP10.77□□□□□ -0.68
TPM3-207ENST00000341372 MFAP3P55082 362 aa10.77□□□□□ -0.68
TPM3-207ENST00000341372 MLLT6P55198 1093 aaPredicted RBP10.77□□□□□ -0.68
TPM3-207ENST00000341372 STARD6P59095 220 aa10.77□□□□□ -0.68
TPM3-207ENST00000341372 SLC7A9P82251 487 aa10.77□□□□□ -0.68
TPM3-207ENST00000341372 PRKCQQ04759 706 aa10.77□□□□□ -0.68
TPM3-207ENST00000341372 KRT31Q15323 416 aa10.77□□□□□ -0.68
TPM3-207ENST00000341372 ZNF77Q15935 545 aa10.77□□□□□ -0.68
TPM3-207ENST00000341372 SEPT7Q16181 437 aaKnown RBP10.77□□□□□ -0.68
TPM3-207ENST00000341372 MEA1Q16626 185 aa10.77□□□□□ -0.68
TPM3-207ENST00000341372 GOLGA7BQ2TAP0 167 aa10.77□□□□□ -0.68
TPM3-207ENST00000341372 LCLAT1Q6UWP7 414 aa10.77□□□□□ -0.68
TPM3-207ENST00000341372 CCDC186Q7Z3E2 898 aa10.77□□□□□ -0.68
TPM3-207ENST00000341372 CNPY4Q8N129 248 aa10.77□□□□□ -0.68
TPM3-207ENST00000341372 ANKRD42Q8N9B4 389 aa10.77□□□□□ -0.68
TPM3-207ENST00000341372 RNF214Q8ND24 703 aa10.77□□□□□ -0.68
TPM3-207ENST00000341372 SMG9Q9H0W8 520 aaKnown RBP10.77□□□□□ -0.68
TPM3-207ENST00000341372 TRPC7Q9HCX4 862 aa10.77□□□□□ -0.68
TPM3-207ENST00000341372 UBE2TQ9NPD8 197 aaPredicted RBP10.77□□□□□ -0.68
TPM3-207ENST00000341372 SHISA7A6NL88 538 aa10.77□□□□□ -0.69
TPM3-207ENST00000341372 BECN2A8MW95 431 aa10.77□□□□□ -0.69
TPM3-207ENST00000341372 XPO1O14980 1071 aaKnown RBP10.77□□□□□ -0.69
TPM3-207ENST00000341372 DNAJC8O75937 253 aaPredicted RBP10.77□□□□□ -0.69
TPM3-207ENST00000341372 SETSIPP0DME0 302 aa10.77□□□□□ -0.69
TPM3-207ENST00000341372 CD19P15391 556 aa10.77□□□□□ -0.69
TPM3-207ENST00000341372 ITPKAP23677 461 aa10.77□□□□□ -0.69
TPM3-207ENST00000341372 GDI1P31150 447 aa10.77□□□□□ -0.69
TPM3-207ENST00000341372 BST2Q10589 180 aaKnown RBP10.77□□□□□ -0.69
TPM3-207ENST00000341372 KCNMA1Q12791 1236 aa10.77□□□□□ -0.69
TPM3-207ENST00000341372 MLF2Q15773 248 aaPredicted RBP10.77□□□□□ -0.69
TPM3-207ENST00000341372 CNGA2Q16280 664 aa10.77□□□□□ -0.69
TPM3-207ENST00000341372 ANO6Q4KMQ2 910 aa10.77□□□□□ -0.69
TPM3-207ENST00000341372 ARHGAP29Q52LW3 1261 aa10.77□□□□□ -0.69
TPM3-207ENST00000341372 PLA2G2CQ5R387 149 aa10.77□□□□□ -0.69
TPM3-207ENST00000341372 GJB7Q6PEY0 223 aa10.77□□□□□ -0.69
TPM3-207ENST00000341372 APTXQ7Z2E3 356 aaKnown RBP10.77□□□□□ -0.69
TPM3-207ENST00000341372 PIGZQ86VD9 579 aa10.77□□□□□ -0.69
TPM3-207ENST00000341372 ARL14EPQ8N8R7 260 aaPredicted RBP10.77□□□□□ -0.69
TPM3-207ENST00000341372 BRD9Q9H8M2 597 aa10.77□□□□□ -0.69
TPM3-207ENST00000341372 ARHGEF4Q9NR80 690 aa10.77□□□□□ -0.69
TPM3-207ENST00000341372 TAB2Q9NYJ8 693 aa10.77□□□□□ -0.69
TPM3-207ENST00000341372 GMIPQ9P107 970 aa10.77□□□□□ -0.69
TPM3-207ENST00000341372 LIMA1Q9UHB6 759 aaKnown RBP10.77□□□□□ -0.69
TPM3-207ENST00000341372 MUC6Q6W4X9 2439 aa10.77□□□□□ -0.69
TPM3-207ENST00000341372 MIA3Q5JRA6 1907 aa10.76□□□□□ -0.69
TPM3-207ENST00000341372 LRRC10BA6NIK2 292 aa10.76□□□□□ -0.69
TPM3-207ENST00000341372 ZNF263O14978 683 aa10.76□□□□□ -0.69
TPM3-207ENST00000341372 CKMP06732 381 aa10.76□□□□□ -0.69
TPM3-207ENST00000341372 ARAFP10398 606 aa10.76□□□□□ -0.69
TPM3-207ENST00000341372 PTGIRP43119 386 aa10.76□□□□□ -0.69
TPM3-207ENST00000341372 CLCN5P51795 746 aa10.76□□□□□ -0.69
TPM3-207ENST00000341372 TMPRSS15P98073 1019 aa10.76□□□□□ -0.69
TPM3-207ENST00000341372 APBA1Q02410 837 aa10.76□□□□□ -0.69
TPM3-207ENST00000341372 SLC44A4Q53GD3 710 aa10.76□□□□□ -0.69
TPM3-207ENST00000341372 SCML4Q8N228 414 aa10.76□□□□□ -0.69
TPM3-207ENST00000341372 ZNF276Q8N554 614 aa10.76□□□□□ -0.69
TPM3-207ENST00000341372 KCTD13Q8WZ19 329 aa10.76□□□□□ -0.69
TPM3-207ENST00000341372 FAM83CQ9BQN1 747 aa10.76□□□□□ -0.69
TPM3-207ENST00000341372 NAT10Q9H0A0 1025 aaKnown RBP10.76□□□□□ -0.69
TPM3-207ENST00000341372 FBRSQ9HAH7 460 aa10.76□□□□□ -0.69
TPM3-207ENST00000341372 ZDHHC3Q9NYG2 299 aa10.76□□□□□ -0.69
TPM3-207ENST00000341372 HESX1Q9UBX0 185 aa10.76□□□□□ -0.69
TPM3-207ENST00000341372 AJAP1Q9UKB5 411 aaPredicted RBP10.76□□□□□ -0.69
TPM3-207ENST00000341372 CA14Q9ULX7 337 aa10.76□□□□□ -0.69
TPM3-207ENST00000341372 GLULP15104 373 aa10.75□□□□□ -0.69
TPM3-207ENST00000341372 HDCP19113 662 aa10.75□□□□□ -0.69
TPM3-207ENST00000341372 AOC1P19801 751 aa10.75□□□□□ -0.69
TPM3-207ENST00000341372 PGFP49763 221 aa10.75□□□□□ -0.69
TPM3-207ENST00000341372 COPB1P53618 953 aaKnown RBP10.75□□□□□ -0.69
TPM3-207ENST00000341372 SLC8A3P57103 927 aa10.75□□□□□ -0.69
TPM3-207ENST00000341372 ZXDBP98169 803 aa10.75□□□□□ -0.69
TPM3-207ENST00000341372 SPATS2Q86XZ4 545 aaKnown RBP10.75□□□□□ -0.69
TPM3-207ENST00000341372 SUGP1Q8IWZ8 645 aaKnown RBP10.75□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms