RNA–Protein interactions for RNA: ENST00000340882.2

NECTIN1-202, Transcript of nectin cell adhesion molecule 1, humanhuman

TSL 1 (best) BASIC

Gene NECTIN1, Length 1,059 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NECTIN1-202ENST00000340882 COL12A1Q99715 3063 aa17.11■□□□□ 0.33
NECTIN1-202ENST00000340882 SLC12A8A0AV02 714 aa17.11■□□□□ 0.33
NECTIN1-202ENST00000340882 C10orf142B7Z368 130 aa17.11■□□□□ 0.33
NECTIN1-202ENST00000340882 ARHGAP6O43182 974 aa17.11■□□□□ 0.33
NECTIN1-202ENST00000340882 EIF5BO60841 1220 aaKnown RBP17.11■□□□□ 0.33
NECTIN1-202ENST00000340882 RALAP11233 206 aa17.11■□□□□ 0.33
NECTIN1-202ENST00000340882 CDK4P11802 303 aa17.11■□□□□ 0.33
NECTIN1-202ENST00000340882 GLDCP23378 1020 aa17.11■□□□□ 0.33
NECTIN1-202ENST00000340882 EPHA8P29322 1005 aaPredicted RBP17.11■□□□□ 0.33
NECTIN1-202ENST00000340882 ACTN2P35609 894 aa17.11■□□□□ 0.33
NECTIN1-202ENST00000340882 SGSHP51688 502 aa17.11■□□□□ 0.33
NECTIN1-202ENST00000340882 CLDN10P78369 228 aa17.11■□□□□ 0.33
NECTIN1-202ENST00000340882 INSM1Q01101 510 aaPredicted RBP17.11■□□□□ 0.33
NECTIN1-202ENST00000340882 ZBTB16Q05516 673 aa17.11■□□□□ 0.33
NECTIN1-202ENST00000340882 FAM26FQ5R3K3 315 aa17.11■□□□□ 0.33
NECTIN1-202ENST00000340882 ARHGAP40Q5TG30 622 aa17.11■□□□□ 0.33
NECTIN1-202ENST00000340882 NCEH1Q6PIU2 408 aa17.11■□□□□ 0.33
NECTIN1-202ENST00000340882 KANSL1Q7Z3B3 1105 aa17.11■□□□□ 0.33
NECTIN1-202ENST00000340882 KIAA0907Q7Z7F0 614 aaPredicted RBP17.11■□□□□ 0.33
NECTIN1-202ENST00000340882 UNC93AQ86WB7 457 aa17.11■□□□□ 0.33
NECTIN1-202ENST00000340882 WFDC5Q8TCV5 224 aa17.11■□□□□ 0.33
NECTIN1-202ENST00000340882 ARID3AQ99856 593 aa17.11■□□□□ 0.33
NECTIN1-202ENST00000340882 PNPLA8Q9NP80 782 aa17.11■□□□□ 0.33
NECTIN1-202ENST00000340882 ABCB8Q9NUT2 735 aa17.11■□□□□ 0.33
NECTIN1-202ENST00000340882 KIF20AO95235 890 aa17.1■□□□□ 0.33
NECTIN1-202ENST00000340882 CASP1P29466 404 aa17.1■□□□□ 0.33
NECTIN1-202ENST00000340882 PSEN1P49768 467 aa17.1■□□□□ 0.33
NECTIN1-202ENST00000340882 E2F5Q15329 346 aa17.1■□□□□ 0.33
NECTIN1-202ENST00000340882 E2F4Q16254 413 aa17.1■□□□□ 0.33
NECTIN1-202ENST00000340882 SFMBT2Q5VUG0 894 aa17.1■□□□□ 0.33
NECTIN1-202ENST00000340882 DCBLD1Q8N8Z6 715 aa17.1■□□□□ 0.33
NECTIN1-202ENST00000340882 MYO19Q96H55 970 aa17.1■□□□□ 0.33
NECTIN1-202ENST00000340882 LGMNQ99538 433 aa17.1■□□□□ 0.33
NECTIN1-202ENST00000340882 PABPC3Q9H361 631 aaKnown RBP17.1■□□□□ 0.33
NECTIN1-202ENST00000340882 AASDHPPTQ9NRN7 309 aa17.1■□□□□ 0.33
NECTIN1-202ENST00000340882 KBTBD4Q9NVX7 518 aa17.1■□□□□ 0.33
NECTIN1-202ENST00000340882 MARCH2Q9P0N8 246 aa17.1■□□□□ 0.33
NECTIN1-202ENST00000340882 PLA2G4CQ9UP65 541 aa17.1■□□□□ 0.33
NECTIN1-202ENST00000340882 CLCA2Q9UQC9 943 aa17.1■□□□□ 0.33
NECTIN1-202ENST00000340882 PCDHB1Q9Y5F3 818 aa17.1■□□□□ 0.33
NECTIN1-202ENST00000340882 PTPN13Q12923 2485 aa17.09■□□□□ 0.33
NECTIN1-202ENST00000340882 B8ZZF3 427 aa17.09■□□□□ 0.33
NECTIN1-202ENST00000340882 EXOC3O60645 756 aa17.09■□□□□ 0.33
NECTIN1-202ENST00000340882 CD38P28907 300 aa17.09■□□□□ 0.33
NECTIN1-202ENST00000340882 ASIC1P78348 528 aa17.09■□□□□ 0.33
NECTIN1-202ENST00000340882 EHHADHQ08426 723 aa17.09■□□□□ 0.33
NECTIN1-202ENST00000340882 SGSM1Q2NKQ1 1148 aa17.09■□□□□ 0.33
NECTIN1-202ENST00000340882 TTC31Q49AM3 519 aaPredicted RBP17.09■□□□□ 0.33
NECTIN1-202ENST00000340882 PPP1R26Q5T8A7 1209 aaPredicted RBP17.09■□□□□ 0.33
NECTIN1-202ENST00000340882 MBLAC2Q68D91 279 aa17.09■□□□□ 0.33
NECTIN1-202ENST00000340882 ZNF776Q68DI1 518 aaPredicted RBP17.09■□□□□ 0.33
NECTIN1-202ENST00000340882 KDM7AQ6ZMT4 941 aa17.09■□□□□ 0.33
NECTIN1-202ENST00000340882 TADA2BQ86TJ2 420 aa17.09■□□□□ 0.33
NECTIN1-202ENST00000340882 C12orf56Q8IXR9 622 aa17.09■□□□□ 0.33
NECTIN1-202ENST00000340882 RFFLQ8WZ73 363 aa17.09■□□□□ 0.33
NECTIN1-202ENST00000340882 NDRG1Q92597 394 aaKnown RBP17.09■□□□□ 0.33
NECTIN1-202ENST00000340882 RSPH9Q9H1X1 276 aaPredicted RBP17.09■□□□□ 0.33
NECTIN1-202ENST00000340882 NEUROG2Q9H2A3 272 aa17.09■□□□□ 0.33
NECTIN1-202ENST00000340882 TNMDQ9H2S6 317 aa17.09■□□□□ 0.33
NECTIN1-202ENST00000340882 FBXL12Q9NXK8 326 aa17.09■□□□□ 0.33
NECTIN1-202ENST00000340882 GGA2Q9UJY4 613 aa17.09■□□□□ 0.33
NECTIN1-202ENST00000340882 VPS37CA5D8V6 355 aaPredicted RBP17.08■□□□□ 0.32
NECTIN1-202ENST00000340882 CAPN8A6NHC0 703 aa17.08■□□□□ 0.32
NECTIN1-202ENST00000340882 ASS1P00966 412 aaKnown RBP17.08■□□□□ 0.32
NECTIN1-202ENST00000340882 PABPC1P11940 636 aaKnown RBP17.08■□□□□ 0.32
NECTIN1-202ENST00000340882 CKMT2P17540 419 aa17.08■□□□□ 0.32
NECTIN1-202ENST00000340882 CD70P32970 193 aa17.08■□□□□ 0.32
NECTIN1-202ENST00000340882 INCA1Q0VD86 236 aa17.08■□□□□ 0.32
NECTIN1-202ENST00000340882 TRIP4Q15650 581 aaPredicted RBP17.08■□□□□ 0.32
NECTIN1-202ENST00000340882 ZACNQ401N2 412 aa17.08■□□□□ 0.32
NECTIN1-202ENST00000340882 PKDCCQ504Y2 493 aa17.08■□□□□ 0.32
NECTIN1-202ENST00000340882 MPPE1Q53F39 396 aa17.08■□□□□ 0.32
NECTIN1-202ENST00000340882 SPATS2Q86XZ4 545 aaKnown RBP17.08■□□□□ 0.32
NECTIN1-202ENST00000340882 DDX51Q8N8A6 666 aaKnown RBP eCLIP17.08■□□□□ 0.32
NECTIN1-202ENST00000340882 GANCQ8TET4 914 aa17.08■□□□□ 0.32
NECTIN1-202ENST00000340882 WFIKKN2Q8TEU8 576 aa17.08■□□□□ 0.32
NECTIN1-202ENST00000340882 TTC9Q92623 222 aa17.08■□□□□ 0.32
NECTIN1-202ENST00000340882 WBP1Q96G27 269 aa17.08■□□□□ 0.32
NECTIN1-202ENST00000340882 HIC2Q96JB3 615 aa17.08■□□□□ 0.32
NECTIN1-202ENST00000340882 DUSP16Q9BY84 665 aa17.08■□□□□ 0.32
NECTIN1-202ENST00000340882 FBRSQ9HAH7 460 aa17.08■□□□□ 0.32
NECTIN1-202ENST00000340882 APOBEC3GQ9HC16 384 aaKnown RBP17.08■□□□□ 0.32
NECTIN1-202ENST00000340882 GDF3Q9NR23 364 aa17.08■□□□□ 0.32
NECTIN1-202ENST00000340882 UBE4BO95155 1302 aa17.07■□□□□ 0.32
NECTIN1-202ENST00000340882 A0A1W2PP55 124 aa17.07■□□□□ 0.32
NECTIN1-202ENST00000340882 MID1O15344 667 aa17.07■□□□□ 0.32
NECTIN1-202ENST00000340882 STX6O43752 255 aa17.07■□□□□ 0.32
NECTIN1-202ENST00000340882 SIN3BO75182 1162 aa17.07■□□□□ 0.32
NECTIN1-202ENST00000340882 DLDP09622 509 aaKnown RBP17.07■□□□□ 0.32
NECTIN1-202ENST00000340882 P4HA1P13674 534 aa17.07■□□□□ 0.32
NECTIN1-202ENST00000340882 AP3M2P53677 418 aa17.07■□□□□ 0.32
NECTIN1-202ENST00000340882 NXPH1P58417 271 aa17.07■□□□□ 0.32
NECTIN1-202ENST00000340882 SNRPFP62306 86 aaKnown RBP17.07■□□□□ 0.32
NECTIN1-202ENST00000340882 RHDQ02161 417 aa17.07■□□□□ 0.32
NECTIN1-202ENST00000340882 KCNC4Q03721 635 aa17.07■□□□□ 0.32
NECTIN1-202ENST00000340882 RABEP1Q15276 862 aa17.07■□□□□ 0.32
NECTIN1-202ENST00000340882 C1orf220Q5T0J3 134 aa17.07■□□□□ 0.32
NECTIN1-202ENST00000340882 USP30Q70CQ3 517 aa17.07■□□□□ 0.32
NECTIN1-202ENST00000340882 BHLHA9Q7RTU4 235 aa17.07■□□□□ 0.32
NECTIN1-202ENST00000340882 CACTIN-AS1Q8N1I8 211 aa17.07■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms