RNA–Protein interactions for RNA: ENST00000340635.10

PDE4D-203, Transcript of phosphodiesterase 4D, humanhuman

TSL 1 (best) BASIC

Gene PDE4D, Length 8,232 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE4D-203ENST00000340635 ERO1BQ86YB8 467 aa14.17□□□□□ -0.14
PDE4D-203ENST00000340635 CYP4X1Q8N118 509 aa14.17□□□□□ -0.14
PDE4D-203ENST00000340635 ZNF248Q8NDW4 579 aa14.17□□□□□ -0.14
PDE4D-203ENST00000340635 TEKT5Q96M29 485 aa14.17□□□□□ -0.14
PDE4D-203ENST00000340635 DGCR6LQ9BY27 220 aa14.17□□□□□ -0.14
PDE4D-203ENST00000340635 GANQ9H2C0 597 aa14.17□□□□□ -0.14
PDE4D-203ENST00000340635 AGRPO00253 132 aa14.17□□□□□ -0.14
PDE4D-203ENST00000340635 IFNA16P05015 189 aa14.17□□□□□ -0.14
PDE4D-203ENST00000340635 RHOCP08134 193 aa14.17□□□□□ -0.14
PDE4D-203ENST00000340635 EPHB3P54753 998 aa14.17□□□□□ -0.14
PDE4D-203ENST00000340635 CSHL1Q14406 222 aa14.17□□□□□ -0.14
PDE4D-203ENST00000340635 QRICH1Q2TAL8 776 aa14.17□□□□□ -0.14
PDE4D-203ENST00000340635 PRR5LQ6MZQ0 368 aa14.17□□□□□ -0.14
PDE4D-203ENST00000340635 COL23A1Q86Y22 540 aaPredicted RBP14.17□□□□□ -0.14
PDE4D-203ENST00000340635 MIB1Q86YT6 1006 aa14.17□□□□□ -0.14
PDE4D-203ENST00000340635 CLVS1Q8IUQ0 354 aaPredicted RBP14.17□□□□□ -0.14
PDE4D-203ENST00000340635 KYQ8NBH2 561 aa14.17□□□□□ -0.14
PDE4D-203ENST00000340635 ACTRT2Q8TDY3 377 aa14.17□□□□□ -0.14
PDE4D-203ENST00000340635 ITCHQ96J02 903 aa14.17□□□□□ -0.14
PDE4D-203ENST00000340635 PCDHB2Q9Y5E7 798 aa14.17□□□□□ -0.14
PDE4D-203ENST00000340635 USP27XA6NNY8 438 aa14.17□□□□□ -0.14
PDE4D-203ENST00000340635 CES2O00748 559 aa14.17□□□□□ -0.14
PDE4D-203ENST00000340635 SPTLC1O15269 473 aa14.17□□□□□ -0.14
PDE4D-203ENST00000340635 LDLRP01130 860 aa14.17□□□□□ -0.14
PDE4D-203ENST00000340635 H2AFXP16104 143 aaPredicted RBP14.17□□□□□ -0.14
PDE4D-203ENST00000340635 NTSP30990 170 aa14.17□□□□□ -0.14
PDE4D-203ENST00000340635 NUMBP49757 651 aa14.17□□□□□ -0.14
PDE4D-203ENST00000340635 TRMT5Q32P41 509 aaKnown RBP14.17□□□□□ -0.14
PDE4D-203ENST00000340635 INO80DQ53TQ3 878 aaPredicted RBP14.17□□□□□ -0.14
PDE4D-203ENST00000340635 HIST2H2ABQ8IUE6 130 aaPredicted RBP14.17□□□□□ -0.14
PDE4D-203ENST00000340635 PARK7Q99497 189 aaKnown RBP14.17□□□□□ -0.14
PDE4D-203ENST00000340635 CLN6Q9NWW5 311 aa14.17□□□□□ -0.14
PDE4D-203ENST00000340635 DNAJC16Q9Y2G8 782 aa14.17□□□□□ -0.14
PDE4D-203ENST00000340635 RFC5P40937 340 aa14.17□□□□□ -0.14
PDE4D-203ENST00000340635 AP3S1Q92572 193 aa14.17□□□□□ -0.14
PDE4D-203ENST00000340635 CLIP3Q96DZ5 547 aa14.17□□□□□ -0.14
PDE4D-203ENST00000340635 KLHL32Q96NJ5 620 aa14.17□□□□□ -0.14
PDE4D-203ENST00000340635 SLC38A2Q96QD8 506 aa14.17□□□□□ -0.14
PDE4D-203ENST00000340635 VCPKMTQ9H867 229 aa14.17□□□□□ -0.14
PDE4D-203ENST00000340635 REEP1Q9H902 201 aa14.17□□□□□ -0.14
PDE4D-203ENST00000340635 F5H6K3 240 aa14.17□□□□□ -0.14
PDE4D-203ENST00000340635 TEX33O43247 280 aa14.17□□□□□ -0.14
PDE4D-203ENST00000340635 RGS14O43566 566 aa14.17□□□□□ -0.14
PDE4D-203ENST00000340635 ITGB6P18564 788 aa14.17□□□□□ -0.14
PDE4D-203ENST00000340635 KLRC3Q07444 240 aa14.17□□□□□ -0.14
PDE4D-203ENST00000340635 ZNF621Q6ZSS3 439 aa14.17□□□□□ -0.14
PDE4D-203ENST00000340635 ARMC8Q8IUR7 673 aa14.17□□□□□ -0.14
PDE4D-203ENST00000340635 ERP44Q9BS26 406 aa14.17□□□□□ -0.14
PDE4D-203ENST00000340635 TRIM2Q9C040 744 aa14.17□□□□□ -0.14
PDE4D-203ENST00000340635 LRRC40Q9H9A6 602 aa14.17□□□□□ -0.14
PDE4D-203ENST00000340635 PIH1D3Q9NQM4 214 aaKnown RBP14.17□□□□□ -0.14
PDE4D-203ENST00000340635 ZBTB22O15209 634 aa14.17□□□□□ -0.14
PDE4D-203ENST00000340635 AP1G2O75843 785 aa14.17□□□□□ -0.14
PDE4D-203ENST00000340635 MMP10P09238 476 aa14.17□□□□□ -0.14
PDE4D-203ENST00000340635 UBA1P22314 1058 aaKnown RBP14.17□□□□□ -0.14
PDE4D-203ENST00000340635 RNF180Q86T96 592 aa14.17□□□□□ -0.14
PDE4D-203ENST00000340635 DHFR2Q86XF0 187 aa14.17□□□□□ -0.14
PDE4D-203ENST00000340635 ZDHHC13Q8IUH4 622 aa14.17□□□□□ -0.14
PDE4D-203ENST00000340635 MFSD1Q9H3U5 465 aa14.17□□□□□ -0.14
PDE4D-203ENST00000340635 TMEM8AQ9HCN3 771 aa14.17□□□□□ -0.14
PDE4D-203ENST00000340635 NDUFAF1Q9Y375 327 aa14.17□□□□□ -0.14
PDE4D-203ENST00000340635 GCC2Q8IWJ2 1684 aa14.16□□□□□ -0.14
PDE4D-203ENST00000340635 PGK1P00558 417 aa14.16□□□□□ -0.14
PDE4D-203ENST00000340635 VBP1P61758 197 aa14.16□□□□□ -0.14
PDE4D-203ENST00000340635 XRCC4Q13426 336 aa14.16□□□□□ -0.14
PDE4D-203ENST00000340635 DEFB107AQ8IZN7 70 aa14.16□□□□□ -0.14
PDE4D-203ENST00000340635 CDK5RAP1Q96SZ6 601 aaKnown RBP14.16□□□□□ -0.14
PDE4D-203ENST00000340635 FRMD8P1Q9BZ68 369 aaPredicted RBP14.16□□□□□ -0.14
PDE4D-203ENST00000340635 C12orf4Q9NQ89 552 aa14.16□□□□□ -0.14
PDE4D-203ENST00000340635 INTS7Q9NVH2 962 aaKnown RBP14.16□□□□□ -0.14
PDE4D-203ENST00000340635 TDP2O95551 362 aa14.16□□□□□ -0.14
PDE4D-203ENST00000340635 PRKAR1AP10644 381 aa14.16□□□□□ -0.14
PDE4D-203ENST00000340635 ZNF37AP17032 561 aaPredicted RBP14.16□□□□□ -0.14
PDE4D-203ENST00000340635 SCTRP47872 440 aa14.16□□□□□ -0.14
PDE4D-203ENST00000340635 FAXCQ5TGI0 409 aa14.16□□□□□ -0.14
PDE4D-203ENST00000340635 OLFML1Q6UWY5 402 aa14.16□□□□□ -0.14
PDE4D-203ENST00000340635 UNC5CLQ8IV45 518 aa14.16□□□□□ -0.14
PDE4D-203ENST00000340635 CELF4Q9BZC1 486 aaKnown RBP14.16□□□□□ -0.14
PDE4D-203ENST00000340635 ELP3Q9H9T3 547 aa14.16□□□□□ -0.14
PDE4D-203ENST00000340635 CCDC59Q9P031 241 aaKnown RBP14.16□□□□□ -0.14
PDE4D-203ENST00000340635 GRIN2AQ12879 1464 aa14.16□□□□□ -0.14
PDE4D-203ENST00000340635 CLOCKO15516 846 aa14.16□□□□□ -0.14
PDE4D-203ENST00000340635 HMGCS2P54868 508 aa14.16□□□□□ -0.14
PDE4D-203ENST00000340635 PTGES3Q15185 160 aaKnown RBP14.16□□□□□ -0.14
PDE4D-203ENST00000340635 SLFN11Q7Z7L1 901 aa14.16□□□□□ -0.14
PDE4D-203ENST00000340635 STK32CQ86UX6 486 aa14.16□□□□□ -0.14
PDE4D-203ENST00000340635 PIGKQ92643 395 aa14.16□□□□□ -0.14
PDE4D-203ENST00000340635 PMM1Q92871 262 aa14.16□□□□□ -0.14
PDE4D-203ENST00000340635 COX4I2Q96KJ9 171 aa14.16□□□□□ -0.14
PDE4D-203ENST00000340635 ZIM3Q96PE6 472 aa14.16□□□□□ -0.14
PDE4D-203ENST00000340635 CDADC1Q9BWV3 514 aa14.16□□□□□ -0.14
PDE4D-203ENST00000340635 ISCUQ9H1K1 167 aa14.16□□□□□ -0.14
PDE4D-203ENST00000340635 PTGFRNQ9P2B2 879 aa14.16□□□□□ -0.14
PDE4D-203ENST00000340635 PFDN2Q9UHV9 154 aa14.16□□□□□ -0.14
PDE4D-203ENST00000340635 PLEKHG1Q9ULL1 1385 aa14.16□□□□□ -0.14
PDE4D-203ENST00000340635 TCEA2Q15560 299 aa14.16□□□□□ -0.14
PDE4D-203ENST00000340635 TCHHL1Q5QJ38 904 aaPredicted RBP14.16□□□□□ -0.14
PDE4D-203ENST00000340635 Q96MT0 163 aa14.16□□□□□ -0.14
PDE4D-203ENST00000340635 MTA3Q9BTC8 594 aa14.16□□□□□ -0.14
PDE4D-203ENST00000340635 C9orf16Q9BUW7 83 aa14.16□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms