RNA–Protein interactions for RNA: ENST00000340611.8

BRAT1-201, Transcript of BRCA1 associated ATM activator 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene BRAT1, Length 2,915 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRAT1-201ENST00000340611 PITPNM1O00562 1244 aa15.58■□□□□ 0.09
BRAT1-201ENST00000340611 SPAG7O75391 227 aa15.58■□□□□ 0.09
BRAT1-201ENST00000340611 TAC1P20366 129 aa15.58■□□□□ 0.09
BRAT1-201ENST00000340611 HOXD12P35452 270 aa15.58■□□□□ 0.09
BRAT1-201ENST00000340611 PNPLA4P41247 253 aa15.58■□□□□ 0.09
BRAT1-201ENST00000340611 TUSC3Q13454 348 aa15.58■□□□□ 0.09
BRAT1-201ENST00000340611 NOMO2Q5JPE7 1267 aa15.58■□□□□ 0.09
BRAT1-201ENST00000340611 TRIM72Q6ZMU5 477 aa15.58■□□□□ 0.09
BRAT1-201ENST00000340611 SCUBE3Q8IX30 993 aa15.58■□□□□ 0.09
BRAT1-201ENST00000340611 KBTBD2Q8IY47 623 aa15.58■□□□□ 0.09
BRAT1-201ENST00000340611 CEP70Q8NHQ1 597 aa15.58■□□□□ 0.09
BRAT1-201ENST00000340611 CENPKQ9BS16 269 aa15.58■□□□□ 0.09
BRAT1-201ENST00000340611 DCLRE1BQ9H816 532 aa15.58■□□□□ 0.09
BRAT1-201ENST00000340611 SQORQ9Y6N5 450 aa15.58■□□□□ 0.09
BRAT1-201ENST00000340611 COMMD3-BMI1R4GMX3 469 aa15.58■□□□□ 0.09
BRAT1-201ENST00000340611 MED7O43513 233 aa15.58■□□□□ 0.08
BRAT1-201ENST00000340611 TTC4O95801 387 aa15.58■□□□□ 0.08
BRAT1-201ENST00000340611 OR4Q2P0C623 313 aa15.58■□□□□ 0.08
BRAT1-201ENST00000340611 EN2P19622 333 aaPredicted RBP15.58■□□□□ 0.08
BRAT1-201ENST00000340611 ITGA8P53708 1063 aa15.58■□□□□ 0.08
BRAT1-201ENST00000340611 OXCT1P55809 520 aa15.58■□□□□ 0.08
BRAT1-201ENST00000340611 ZNF252P-AS1Q0IIN9 211 aa15.58■□□□□ 0.08
BRAT1-201ENST00000340611 DNAJC3Q13217 504 aa15.58■□□□□ 0.08
BRAT1-201ENST00000340611 ATP13A4Q4VNC1 1196 aa15.58■□□□□ 0.08
BRAT1-201ENST00000340611 LRRC74BQ6ZQY2 392 aa15.58■□□□□ 0.08
BRAT1-201ENST00000340611 ENDOVQ8N8Q3 282 aaKnown RBP15.58■□□□□ 0.08
BRAT1-201ENST00000340611 ATP11CQ8NB49 1132 aa15.58■□□□□ 0.08
BRAT1-201ENST00000340611 SEPT8Q92599 483 aa15.58■□□□□ 0.08
BRAT1-201ENST00000340611 ARMC5Q96C12 935 aa15.58■□□□□ 0.08
BRAT1-201ENST00000340611 DHRS1Q96LJ7 313 aa15.58■□□□□ 0.08
BRAT1-201ENST00000340611 C9orf72Q96LT7 481 aa15.58■□□□□ 0.08
BRAT1-201ENST00000340611 CRTAC1Q9NQ79 661 aa15.58■□□□□ 0.08
BRAT1-201ENST00000340611 TMEM30AQ9NV96 361 aa15.58■□□□□ 0.08
BRAT1-201ENST00000340611 NAALADL1Q9UQQ1 740 aa15.58■□□□□ 0.08
BRAT1-201ENST00000340611 F8VP50 259 aa15.57■□□□□ 0.08
BRAT1-201ENST00000340611 VAV1P15498 845 aa15.57■□□□□ 0.08
BRAT1-201ENST00000340611 CSF2RAP15509 400 aa15.57■□□□□ 0.08
BRAT1-201ENST00000340611 RFC1P35251 1148 aaPredicted RBP15.57■□□□□ 0.08
BRAT1-201ENST00000340611 HPCAP84074 193 aa15.57■□□□□ 0.08
BRAT1-201ENST00000340611 TMEM173Q86WV6 379 aaPredicted RBP15.57■□□□□ 0.08
BRAT1-201ENST00000340611 B3GALNT2Q8NCR0 500 aa15.57■□□□□ 0.08
BRAT1-201ENST00000340611 PPFIBP2Q8ND30 876 aa15.57■□□□□ 0.08
BRAT1-201ENST00000340611 STKLD1Q8NE28 680 aa15.57■□□□□ 0.08
BRAT1-201ENST00000340611 TRIM43Q96BQ3 446 aaPredicted RBP15.57■□□□□ 0.08
BRAT1-201ENST00000340611 ARPC5LQ9BPX5 153 aa15.57■□□□□ 0.08
BRAT1-201ENST00000340611 ADAM33Q9BZ11 813 aa15.57■□□□□ 0.08
BRAT1-201ENST00000340611 SLCO1B3Q9NPD5 702 aa15.57■□□□□ 0.08
BRAT1-201ENST00000340611 R3HDM2Q9Y2K5 976 aaKnown RBP15.57■□□□□ 0.08
BRAT1-201ENST00000340611 PCDHB7Q9Y5E2 793 aa15.57■□□□□ 0.08
BRAT1-201ENST00000340611 FAM189BP81408 668 aa15.57■□□□□ 0.08
BRAT1-201ENST00000340611 CYP1B1Q16678 543 aa15.57■□□□□ 0.08
BRAT1-201ENST00000340611 CMPK2Q5EBM0 449 aa15.57■□□□□ 0.08
BRAT1-201ENST00000340611 LIN9Q5TKA1 542 aa15.57■□□□□ 0.08
BRAT1-201ENST00000340611 DNAJC24Q6P3W2 148 aa15.57■□□□□ 0.08
BRAT1-201ENST00000340611 DCUN1D2Q6PH85 259 aa15.57■□□□□ 0.08
BRAT1-201ENST00000340611 LCLAT1Q6UWP7 414 aa15.57■□□□□ 0.08
BRAT1-201ENST00000340611 ABI1Q8IZP0 508 aa15.57■□□□□ 0.08
BRAT1-201ENST00000340611 AGGF1Q8N302 714 aaeCLIP15.57■□□□□ 0.08
BRAT1-201ENST00000340611 PDCD7Q8N8D1 485 aaKnown RBP15.57■□□□□ 0.08
BRAT1-201ENST00000340611 ABHD8Q96I13 439 aa15.57■□□□□ 0.08
BRAT1-201ENST00000340611 C11orf49Q9H6J7 331 aa15.57■□□□□ 0.08
BRAT1-201ENST00000340611 NINJ2Q9NZG7 142 aa15.57■□□□□ 0.08
BRAT1-201ENST00000340611 LCP1P13796 627 aa15.57■□□□□ 0.08
BRAT1-201ENST00000340611 ATP5DP30049 168 aa15.57■□□□□ 0.08
BRAT1-201ENST00000340611 TAS2R40P59535 323 aa15.57■□□□□ 0.08
BRAT1-201ENST00000340611 TMED2Q15363 201 aa15.57■□□□□ 0.08
BRAT1-201ENST00000340611 SH3PXD2AQ5TCZ1 1133 aa15.57■□□□□ 0.08
BRAT1-201ENST00000340611 RNF43Q68DV7 783 aa15.57■□□□□ 0.08
BRAT1-201ENST00000340611 TXNRD3NBQ6F5E7 133 aa15.57■□□□□ 0.08
BRAT1-201ENST00000340611 PLEKHA7Q6IQ23 1121 aa15.57■□□□□ 0.08
BRAT1-201ENST00000340611 CD101Q93033 1021 aa15.57■□□□□ 0.08
BRAT1-201ENST00000340611 MAGEB18Q96M61 343 aa15.57■□□□□ 0.08
BRAT1-201ENST00000340611 RTP3Q9BQQ7 232 aa15.57■□□□□ 0.08
BRAT1-201ENST00000340611 TBX21Q9UL17 535 aa15.57■□□□□ 0.08
BRAT1-201ENST00000340611 LRFN2Q9ULH4 789 aa15.57■□□□□ 0.08
BRAT1-201ENST00000340611 HEY1Q9Y5J3 304 aa15.57■□□□□ 0.08
BRAT1-201ENST00000340611 MAP3K7O43318 606 aa15.56■□□□□ 0.08
BRAT1-201ENST00000340611 WDR4P57081 412 aaKnown RBP15.56■□□□□ 0.08
BRAT1-201ENST00000340611 C1QBPQ07021 282 aaKnown RBP15.56■□□□□ 0.08
BRAT1-201ENST00000340611 OR6B2Q6IFH4 312 aa15.56■□□□□ 0.08
BRAT1-201ENST00000340611 ARHGEF18Q6ZSZ5 1173 aa15.56■□□□□ 0.08
BRAT1-201ENST00000340611 PAQR9Q6ZVX9 377 aa15.56■□□□□ 0.08
BRAT1-201ENST00000340611 XYLT1Q86Y38 959 aa15.56■□□□□ 0.08
BRAT1-201ENST00000340611 NAT14Q8WUY8 206 aa15.56■□□□□ 0.08
BRAT1-201ENST00000340611 KCNK16Q96T55 309 aa15.56■□□□□ 0.08
BRAT1-201ENST00000340611 LRMDAQ9H2I8 198 aa15.56■□□□□ 0.08
BRAT1-201ENST00000340611 CHKBQ9Y259 395 aa15.56■□□□□ 0.08
BRAT1-201ENST00000340611 SLC4A7Q9Y6M7 1214 aa15.56■□□□□ 0.08
BRAT1-201ENST00000340611 TBKBP1A7MCY6 615 aa15.56■□□□□ 0.08
BRAT1-201ENST00000340611 TBX10O75333 385 aa15.56■□□□□ 0.08
BRAT1-201ENST00000340611 LSM8O95777 96 aaKnown RBP15.56■□□□□ 0.08
BRAT1-201ENST00000340611 PTPN1P18031 435 aaKnown RBP15.56■□□□□ 0.08
BRAT1-201ENST00000340611 CDH5P33151 784 aaPredicted RBP15.56■□□□□ 0.08
BRAT1-201ENST00000340611 PARP6Q2NL67 630 aa15.56■□□□□ 0.08
BRAT1-201ENST00000340611 TMEM53Q6P2H8 277 aa15.56■□□□□ 0.08
BRAT1-201ENST00000340611 FAM183BPQ6ZVS7 135 aa15.56■□□□□ 0.08
BRAT1-201ENST00000340611 MRRFQ96E11 262 aaKnown RBP15.56■□□□□ 0.08
BRAT1-201ENST00000340611 HAPLN3Q96S86 360 aa15.56■□□□□ 0.08
BRAT1-201ENST00000340611 HERPUD2Q9BSE4 406 aa15.56■□□□□ 0.08
BRAT1-201ENST00000340611 MED10Q9BTT4 135 aa15.56■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms