RNA–Protein interactions for RNA: ENST00000340157.8

VRK2-201, Transcript of vaccinia related kinase 2, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene VRK2, Length 1,888 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK2-201ENST00000340157 CEP295NLQ96MC4 621 aa21.9■■□□□ 1.1
VRK2-201ENST00000340157 HAPLN3Q96S86 360 aa21.9■■□□□ 1.1
VRK2-201ENST00000340157 SEMA4AQ9H3S1 761 aa21.9■■□□□ 1.1
VRK2-201ENST00000340157 PLAAQ9Y263 795 aa21.9■■□□□ 1.1
VRK2-201ENST00000340157 TLR6Q9Y2C9 796 aa21.9■■□□□ 1.1
VRK2-201ENST00000340157 INSL6Q9Y581 213 aa21.9■■□□□ 1.1
VRK2-201ENST00000340157 PCDHB12Q9Y5F1 795 aa21.9■■□□□ 1.1
VRK2-201ENST00000340157 LCHNA4D1U4 455 aa21.89■■□□□ 1.09
VRK2-201ENST00000340157 VAV1P15498 845 aa21.89■■□□□ 1.09
VRK2-201ENST00000340157 PSEN1P49768 467 aa21.89■■□□□ 1.09
VRK2-201ENST00000340157 EFEMP1Q12805 493 aa21.89■■□□□ 1.09
VRK2-201ENST00000340157 MANEALQ5VSG8 457 aa21.89■■□□□ 1.09
VRK2-201ENST00000340157 PSRC1Q6PGN9 363 aaPredicted RBP21.89■■□□□ 1.09
VRK2-201ENST00000340157 HERC6Q8IVU3 1022 aa21.89■■□□□ 1.09
VRK2-201ENST00000340157 HERVK_113Q902F9 699 aa21.89■■□□□ 1.09
VRK2-201ENST00000340157 CPT1BQ92523 772 aa21.89■■□□□ 1.09
VRK2-201ENST00000340157 SH3GL2Q99962 352 aa21.89■■□□□ 1.09
VRK2-201ENST00000340157 CYP4F11Q9HBI6 524 aa21.89■■□□□ 1.09
VRK2-201ENST00000340157 DNAJC17Q9NVM6 304 aaKnown RBP21.89■■□□□ 1.09
VRK2-201ENST00000340157 CHD7Q9P2D1 2997 aa21.89■■□□□ 1.09
VRK2-201ENST00000340157 YIPF1Q9Y548 306 aa21.89■■□□□ 1.09
VRK2-201ENST00000340157 NR2E3Q9Y5X4 410 aa21.89■■□□□ 1.09
VRK2-201ENST00000340157 DOCK4Q8N1I0 1966 aa21.89■■□□□ 1.09
VRK2-201ENST00000340157 CFAP69A5D8W1 941 aa21.88■■□□□ 1.09
VRK2-201ENST00000340157 TEX28O15482 410 aa21.88■■□□□ 1.09
VRK2-201ENST00000340157 OAS2P29728 719 aaKnown RBP21.88■■□□□ 1.09
VRK2-201ENST00000340157 ANKRD22Q5VYY1 191 aa21.88■■□□□ 1.09
VRK2-201ENST00000340157 CCDC25Q86WR0 208 aa21.88■■□□□ 1.09
VRK2-201ENST00000340157 CDKL3Q8IVW4 592 aaPredicted RBP21.88■■□□□ 1.09
VRK2-201ENST00000340157 TAB3Q8N5C8 712 aaPredicted RBP21.88■■□□□ 1.09
VRK2-201ENST00000340157 SP7Q8TDD2 431 aaPredicted RBP21.88■■□□□ 1.09
VRK2-201ENST00000340157 PRCCQ92733 491 aaPredicted RBP21.88■■□□□ 1.09
VRK2-201ENST00000340157 LGMNQ99538 433 aa21.88■■□□□ 1.09
VRK2-201ENST00000340157 EPAS1Q99814 870 aa21.88■■□□□ 1.09
VRK2-201ENST00000340157 ZBED2Q9BTP6 218 aa21.88■■□□□ 1.09
VRK2-201ENST00000340157 UBE2OQ9C0C9 1292 aaKnown RBP21.88■■□□□ 1.09
VRK2-201ENST00000340157 SIK2Q9H0K1 926 aa21.88■■□□□ 1.09
VRK2-201ENST00000340157 CCSER2Q9H7U1 834 aa21.88■■□□□ 1.09
VRK2-201ENST00000340157 MRPL17Q9NRX2 175 aaKnown RBP21.88■■□□□ 1.09
VRK2-201ENST00000340157 SHROOM3Q8TF72 1996 aa21.88■■□□□ 1.09
VRK2-201ENST00000340157 OBSL1O75147 1896 aa21.88■■□□□ 1.09
VRK2-201ENST00000340157 GAD2Q05329 585 aa21.88■■□□□ 1.09
VRK2-201ENST00000340157 MORF4L2Q15014 288 aa21.88■■□□□ 1.09
VRK2-201ENST00000340157 SPDYCQ5MJ68 293 aa21.88■■□□□ 1.09
VRK2-201ENST00000340157 ZCCHC9Q8N567 271 aaKnown RBP21.88■■□□□ 1.09
VRK2-201ENST00000340157 KLHL23Q8NBE8 558 aa21.88■■□□□ 1.09
VRK2-201ENST00000340157 OR2W6PQ8NHA6 318 aa21.88■■□□□ 1.09
VRK2-201ENST00000340157 PABPC3Q9H361 631 aaKnown RBP21.88■■□□□ 1.09
VRK2-201ENST00000340157 MYO18AQ92614 2054 aaKnown RBP21.87■■□□□ 1.09
VRK2-201ENST00000340157 RRP9O43818 475 aaKnown RBP21.87■■□□□ 1.09
VRK2-201ENST00000340157 EPHB2P29323 1055 aa21.87■■□□□ 1.09
VRK2-201ENST00000340157 ZNF135P52742 658 aaPredicted RBP21.87■■□□□ 1.09
VRK2-201ENST00000340157 SLMAPQ14BN4 828 aa21.87■■□□□ 1.09
VRK2-201ENST00000340157 PRKD1Q15139 912 aaPredicted RBP21.87■■□□□ 1.09
VRK2-201ENST00000340157 NAT8LQ8N9F0 302 aa21.87■■□□□ 1.09
VRK2-201ENST00000340157 RXFP1Q9HBX9 757 aa21.87■■□□□ 1.09
VRK2-201ENST00000340157 LRRC4CQ9HCJ2 640 aa21.87■■□□□ 1.09
VRK2-201ENST00000340157 FNIP2Q9P278 1114 aa21.87■■□□□ 1.09
VRK2-201ENST00000340157 HS3ST4Q9Y661 456 aa21.87■■□□□ 1.09
VRK2-201ENST00000340157 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP21.86■■□□□ 1.09
VRK2-201ENST00000340157 TCRBV7S3A2A0A539 114 aa21.86■■□□□ 1.09
VRK2-201ENST00000340157 MOCS2O96007 188 aaPredicted RBP21.86■■□□□ 1.09
VRK2-201ENST00000340157 CTSAP10619 480 aa21.86■■□□□ 1.09
VRK2-201ENST00000340157 HOXC13P31276 330 aa21.86■■□□□ 1.09
VRK2-201ENST00000340157 TBX4P57082 545 aa21.86■■□□□ 1.09
VRK2-201ENST00000340157 C10orf120Q5SQS8 335 aa21.86■■□□□ 1.09
VRK2-201ENST00000340157 PIK3R6Q5UE93 754 aa21.86■■□□□ 1.09
VRK2-201ENST00000340157 MIB1Q86YT6 1006 aa21.86■■□□□ 1.09
VRK2-201ENST00000340157 GPR65Q8IYL9 337 aa21.86■■□□□ 1.09
VRK2-201ENST00000340157 RAD9AQ99638 391 aa21.86■■□□□ 1.09
VRK2-201ENST00000340157 KLC2Q9H0B6 622 aa21.86■■□□□ 1.09
VRK2-201ENST00000340157 MED4Q9NPJ6 270 aa21.86■■□□□ 1.09
VRK2-201ENST00000340157 MARCH2Q9P0N8 246 aa21.86■■□□□ 1.09
VRK2-201ENST00000340157 ZMYND8Q9ULU4 1186 aaPredicted RBP21.86■■□□□ 1.09
VRK2-201ENST00000340157 SHOC2Q9UQ13 582 aa21.86■■□□□ 1.09
VRK2-201ENST00000340157 TLR5O60602 858 aa21.86■■□□□ 1.09
VRK2-201ENST00000340157 TMEM63AO94886 807 aa21.86■■□□□ 1.09
VRK2-201ENST00000340157 IGLV3-27P01718 113 aa21.86■■□□□ 1.09
VRK2-201ENST00000340157 CBX1P83916 185 aa21.86■■□□□ 1.09
VRK2-201ENST00000340157 TRIP4Q15650 581 aaPredicted RBP21.86■■□□□ 1.09
VRK2-201ENST00000340157 C14orf80Q86SX3 495 aa21.86■■□□□ 1.09
VRK2-201ENST00000340157 CCDC110Q8TBZ0 833 aa21.86■■□□□ 1.09
VRK2-201ENST00000340157 TFB1MQ8WVM0 346 aaKnown RBP21.86■■□□□ 1.09
VRK2-201ENST00000340157 MYRFLQ96LU7 910 aa21.86■■□□□ 1.09
VRK2-201ENST00000340157 CDC42EP4Q9H3Q1 356 aaKnown RBP21.86■■□□□ 1.09
VRK2-201ENST00000340157 PRDM12Q9H4Q4 367 aa21.86■■□□□ 1.09
VRK2-201ENST00000340157 OLA1Q9NTK5 396 aaKnown RBP21.86■■□□□ 1.09
VRK2-201ENST00000340157 SLC4A7Q9Y6M7 1214 aa21.86■■□□□ 1.09
VRK2-201ENST00000340157 HACD1B0YJ81 288 aa21.85■■□□□ 1.09
VRK2-201ENST00000340157 CNPP09543 421 aaKnown RBP21.85■■□□□ 1.09
VRK2-201ENST00000340157 SRGAP2BP0DMP2 458 aa21.85■■□□□ 1.09
VRK2-201ENST00000340157 GPS2Q13227 327 aa21.85■■□□□ 1.09
VRK2-201ENST00000340157 SNX30Q5VWJ9 437 aa21.85■■□□□ 1.09
VRK2-201ENST00000340157 PPIL6Q8IXY8 311 aa21.85■■□□□ 1.09
VRK2-201ENST00000340157 TCEAL8Q8IYN2 117 aa21.85■■□□□ 1.09
VRK2-201ENST00000340157 ZNF683Q8IZ20 524 aa21.85■■□□□ 1.09
VRK2-201ENST00000340157 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP21.85■■□□□ 1.09
VRK2-201ENST00000340157 ZNF840PA6NDX5 716 aa21.84■■□□□ 1.09
VRK2-201ENST00000340157 SHBGP04278 402 aa21.84■■□□□ 1.09
VRK2-201ENST00000340157 ATP2A2P16615 1042 aaKnown RBP21.84■■□□□ 1.09
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms