RNA–Protein interactions for RNA: ENST00000340026.10

TRAF3IP2-201, Transcript of TRAF3 interacting protein 2, humanhuman

TSL 1 (best) BASIC

Gene TRAF3IP2, Length 2,785 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3IP2-201ENST00000340026 THP07101 528 aa11.05□□□□□ -0.64
TRAF3IP2-201ENST00000340026 PCSK1P29120 753 aa11.05□□□□□ -0.64
TRAF3IP2-201ENST00000340026 SERPINB4P48594 390 aa11.05□□□□□ -0.64
TRAF3IP2-201ENST00000340026 PPIDQ08752 370 aaKnown RBP11.05□□□□□ -0.64
TRAF3IP2-201ENST00000340026 WASHC5Q12768 1159 aa11.05□□□□□ -0.64
TRAF3IP2-201ENST00000340026 KRT72Q14CN4 511 aa11.05□□□□□ -0.64
TRAF3IP2-201ENST00000340026 CTC1Q2NKJ3 1217 aa11.05□□□□□ -0.64
TRAF3IP2-201ENST00000340026 PREPLQ4J6C6 727 aaPredicted RBP11.05□□□□□ -0.64
TRAF3IP2-201ENST00000340026 KIAA0319Q5VV43 1072 aa11.05□□□□□ -0.64
TRAF3IP2-201ENST00000340026 CST9Q5W186 159 aa11.05□□□□□ -0.64
TRAF3IP2-201ENST00000340026 WSCD1Q658N2 575 aa11.05□□□□□ -0.64
TRAF3IP2-201ENST00000340026 BHLHA9Q7RTU4 235 aa11.05□□□□□ -0.64
TRAF3IP2-201ENST00000340026 DDX51Q8N8A6 666 aaKnown RBP eCLIP11.05□□□□□ -0.64
TRAF3IP2-201ENST00000340026 HDAC11Q96DB2 347 aa11.05□□□□□ -0.64
TRAF3IP2-201ENST00000340026 STAMBPL1Q96FJ0 436 aa11.05□□□□□ -0.64
TRAF3IP2-201ENST00000340026 P2RY11Q96G91 374 aa11.05□□□□□ -0.64
TRAF3IP2-201ENST00000340026 UROC1Q96N76 676 aa11.05□□□□□ -0.64
TRAF3IP2-201ENST00000340026 SRPK1Q96SB4 655 aaKnown RBP11.05□□□□□ -0.64
TRAF3IP2-201ENST00000340026 APOL6Q9BWW8 343 aa11.05□□□□□ -0.64
TRAF3IP2-201ENST00000340026 TSSK1BQ9BXA7 367 aa11.05□□□□□ -0.64
TRAF3IP2-201ENST00000340026 GOLGA2P5Q9HBQ8 144 aa11.05□□□□□ -0.64
TRAF3IP2-201ENST00000340026 TRHDEQ9UKU6 1024 aa11.05□□□□□ -0.64
TRAF3IP2-201ENST00000340026 DSEQ9UL01 958 aa11.05□□□□□ -0.64
TRAF3IP2-201ENST00000340026 CDY2AQ9Y6F7 541 aa11.05□□□□□ -0.64
TRAF3IP2-201ENST00000340026 ARHGEF37A1IGU5 675 aa11.04□□□□□ -0.64
TRAF3IP2-201ENST00000340026 CACNG3O60359 315 aa11.04□□□□□ -0.64
TRAF3IP2-201ENST00000340026 PYGBP11216 843 aa11.04□□□□□ -0.64
TRAF3IP2-201ENST00000340026 CYBAP13498 195 aa11.04□□□□□ -0.64
TRAF3IP2-201ENST00000340026 TKTL1P51854 596 aa11.04□□□□□ -0.64
TRAF3IP2-201ENST00000340026 DEUP1Q05D60 604 aa11.04□□□□□ -0.64
TRAF3IP2-201ENST00000340026 TAF1CQ15572 869 aaPredicted RBP11.04□□□□□ -0.64
TRAF3IP2-201ENST00000340026 DCAF6Q58WW2 860 aa11.04□□□□□ -0.64
TRAF3IP2-201ENST00000340026 ATG16L1Q676U5 607 aa11.04□□□□□ -0.64
TRAF3IP2-201ENST00000340026 FAM43BQ6ZT52 329 aaPredicted RBP11.04□□□□□ -0.64
TRAF3IP2-201ENST00000340026 NLRP9Q7RTR0 991 aa11.04□□□□□ -0.64
TRAF3IP2-201ENST00000340026 ARNTL2Q8WYA1 636 aa11.04□□□□□ -0.64
TRAF3IP2-201ENST00000340026 SMARCD1Q96GM5 515 aa11.04□□□□□ -0.64
TRAF3IP2-201ENST00000340026 SYT15Q9BQS2 421 aa11.04□□□□□ -0.64
TRAF3IP2-201ENST00000340026 ACBD6Q9BR61 282 aa11.04□□□□□ -0.64
TRAF3IP2-201ENST00000340026 NOD2Q9HC29 1040 aa11.04□□□□□ -0.64
TRAF3IP2-201ENST00000340026 DDX43Q9NXZ2 648 aaKnown RBP11.04□□□□□ -0.64
TRAF3IP2-201ENST00000340026 HMX2A2RU54 273 aa11.04□□□□□ -0.64
TRAF3IP2-201ENST00000340026 CXorf49A8MYA2 514 aaPredicted RBP11.04□□□□□ -0.64
TRAF3IP2-201ENST00000340026 SNNO75324 88 aaPredicted RBP11.04□□□□□ -0.64
TRAF3IP2-201ENST00000340026 BEST1O76090 585 aa11.04□□□□□ -0.64
TRAF3IP2-201ENST00000340026 DLDP09622 509 aaKnown RBP11.04□□□□□ -0.64
TRAF3IP2-201ENST00000340026 MX2P20592 715 aa11.04□□□□□ -0.64
TRAF3IP2-201ENST00000340026 MAGEA12P43365 314 aa11.04□□□□□ -0.64
TRAF3IP2-201ENST00000340026 CXCR3P49682 368 aa11.04□□□□□ -0.64
TRAF3IP2-201ENST00000340026 CCL14Q16627 93 aa11.04□□□□□ -0.64
TRAF3IP2-201ENST00000340026 UPP1Q16831 310 aa11.04□□□□□ -0.64
TRAF3IP2-201ENST00000340026 ARL13BQ3SXY8 428 aa11.04□□□□□ -0.64
TRAF3IP2-201ENST00000340026 SPANXN3Q5MJ09 141 aa11.04□□□□□ -0.64
TRAF3IP2-201ENST00000340026 FAM131BQ86XD5 332 aa11.04□□□□□ -0.64
TRAF3IP2-201ENST00000340026 PPM1NQ8N819 430 aa11.04□□□□□ -0.64
TRAF3IP2-201ENST00000340026 COLGALT1Q8NBJ5 622 aa11.04□□□□□ -0.64
TRAF3IP2-201ENST00000340026 ZMIZ2Q8NF64 920 aa11.04□□□□□ -0.64
TRAF3IP2-201ENST00000340026 CDKL2Q92772 493 aa11.04□□□□□ -0.64
TRAF3IP2-201ENST00000340026 SKA1Q96BD8 255 aa11.04□□□□□ -0.64
TRAF3IP2-201ENST00000340026 ERP27Q96DN0 273 aa11.04□□□□□ -0.64
TRAF3IP2-201ENST00000340026 CFAP36Q96G28 342 aa11.04□□□□□ -0.64
TRAF3IP2-201ENST00000340026 ANKRD27Q96NW4 1050 aa11.04□□□□□ -0.64
TRAF3IP2-201ENST00000340026 PKMYT1Q99640 499 aa11.04□□□□□ -0.64
TRAF3IP2-201ENST00000340026 SMOQ99835 787 aa11.04□□□□□ -0.64
TRAF3IP2-201ENST00000340026 STN1Q9H668 368 aaKnown RBP11.04□□□□□ -0.64
TRAF3IP2-201ENST00000340026 KCNK4Q9NYG8 393 aa11.04□□□□□ -0.64
TRAF3IP2-201ENST00000340026 KANSL3Q9P2N6 904 aa11.04□□□□□ -0.64
TRAF3IP2-201ENST00000340026 ADAM28Q9UKQ2 775 aa11.04□□□□□ -0.64
TRAF3IP2-201ENST00000340026 ST3GAL5Q9UNP4 418 aa11.04□□□□□ -0.64
TRAF3IP2-201ENST00000340026 NLRC5Q86WI3 1866 aa11.04□□□□□ -0.64
TRAF3IP2-201ENST00000340026 M0QYT0 321 aa11.03□□□□□ -0.64
TRAF3IP2-201ENST00000340026 M0QZQ0 153 aa11.03□□□□□ -0.64
TRAF3IP2-201ENST00000340026 RNF103O00237 685 aa11.03□□□□□ -0.64
TRAF3IP2-201ENST00000340026 IGLV3-25P01717 112 aa11.03□□□□□ -0.64
TRAF3IP2-201ENST00000340026 CSH1P0DML2 217 aa11.03□□□□□ -0.64
TRAF3IP2-201ENST00000340026 CSH2P0DML3 217 aa11.03□□□□□ -0.64
TRAF3IP2-201ENST00000340026 T-ENOLP0DO92 83 aa11.03□□□□□ -0.64
TRAF3IP2-201ENST00000340026 SKIP12755 728 aa11.03□□□□□ -0.64
TRAF3IP2-201ENST00000340026 CCND1P24385 295 aa11.03□□□□□ -0.64
TRAF3IP2-201ENST00000340026 MNAT1P51948 309 aa11.03□□□□□ -0.64
TRAF3IP2-201ENST00000340026 DSC3Q14574 896 aa11.03□□□□□ -0.64
TRAF3IP2-201ENST00000340026 PLEKHG4Q58EX7 1191 aa11.03□□□□□ -0.64
TRAF3IP2-201ENST00000340026 FAM26DQ5JW98 314 aa11.03□□□□□ -0.64
TRAF3IP2-201ENST00000340026 KCTD11Q693B1 232 aa11.03□□□□□ -0.64
TRAF3IP2-201ENST00000340026 IFNL1Q8IU54 200 aa11.03□□□□□ -0.64
TRAF3IP2-201ENST00000340026 CCDC117Q8IWD4 279 aaPredicted RBP11.03□□□□□ -0.64
TRAF3IP2-201ENST00000340026 PTPRN2Q92932 1015 aa11.03□□□□□ -0.64
TRAF3IP2-201ENST00000340026 OSBPL2Q9H1P3 480 aa11.03□□□□□ -0.64
TRAF3IP2-201ENST00000340026 KCNK13Q9HB14 408 aa11.03□□□□□ -0.64
TRAF3IP2-201ENST00000340026 KRT82Q9NSB4 513 aa11.03□□□□□ -0.64
TRAF3IP2-201ENST00000340026 PIGVQ9NUD9 493 aa11.03□□□□□ -0.64
TRAF3IP2-201ENST00000340026 MAGEB16A2A368 324 aa11.03□□□□□ -0.64
TRAF3IP2-201ENST00000340026 EEF2KO00418 725 aaKnown RBP11.03□□□□□ -0.64
TRAF3IP2-201ENST00000340026 CST5P28325 142 aaPredicted RBP11.03□□□□□ -0.64
TRAF3IP2-201ENST00000340026 HOXC13P31276 330 aa11.03□□□□□ -0.64
TRAF3IP2-201ENST00000340026 CCNG1P51959 295 aa11.03□□□□□ -0.64
TRAF3IP2-201ENST00000340026 KCNJ2P63252 427 aa11.03□□□□□ -0.64
TRAF3IP2-201ENST00000340026 BEX3Q00994 111 aa11.03□□□□□ -0.64
TRAF3IP2-201ENST00000340026 OCRLQ01968 901 aa11.03□□□□□ -0.64
TRAF3IP2-201ENST00000340026 GALNT2Q10471 571 aa11.03□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms