RNA–Protein interactions for RNA: ENST00000339701.7

CSMD3-202, Transcript of CUB and Sushi multiple domains 3, humanhuman

TSL 1 (best)

Gene CSMD3, Length 10,773 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD3-202ENST00000339701 DCAF4L1Q3SXM0 396 aa3.37□□□□□ -1.87
CSMD3-202ENST00000339701 FAM91A1Q658Y4 838 aa3.37□□□□□ -1.87
CSMD3-202ENST00000339701 MOXD1Q6UVY6 613 aa3.37□□□□□ -1.87
CSMD3-202ENST00000339701 DENND6AQ8IWF6 608 aa3.37□□□□□ -1.87
CSMD3-202ENST00000339701 FSTL5Q8N475 847 aaPredicted RBP3.37□□□□□ -1.87
CSMD3-202ENST00000339701 U2AF1L4Q8WU68 220 aaKnown RBP3.37□□□□□ -1.87
CSMD3-202ENST00000339701 ELMO1Q92556 727 aa3.37□□□□□ -1.87
CSMD3-202ENST00000339701 NR4A3Q92570 626 aa3.37□□□□□ -1.87
CSMD3-202ENST00000339701 IFT43Q96FT9 208 aa3.37□□□□□ -1.87
CSMD3-202ENST00000339701 CCDC3Q9BQI4 270 aa3.37□□□□□ -1.87
CSMD3-202ENST00000339701 GPR88Q9GZN0 384 aa3.37□□□□□ -1.87
CSMD3-202ENST00000339701 CCDC177Q9NQR7 707 aaPredicted RBP3.37□□□□□ -1.87
CSMD3-202ENST00000339701 RNF186Q9NXI6 227 aa3.37□□□□□ -1.87
CSMD3-202ENST00000339701 TRMT6Q9UJA5 497 aaKnown RBP3.37□□□□□ -1.87
CSMD3-202ENST00000339701 PPP2R2CQ9Y2T4 447 aa3.37□□□□□ -1.87
CSMD3-202ENST00000339701 GOLGA8SH3BPF8 625 aa3.37□□□□□ -1.87
CSMD3-202ENST00000339701 MAGEB3O15480 346 aa3.37□□□□□ -1.87
CSMD3-202ENST00000339701 PDE5AO76074 875 aa3.37□□□□□ -1.87
CSMD3-202ENST00000339701 ERBB2P04626 1255 aa3.37□□□□□ -1.87
CSMD3-202ENST00000339701 FCER2P06734 321 aa3.37□□□□□ -1.87
CSMD3-202ENST00000339701 HIST1H2AGP0C0S8 130 aaPredicted RBP3.37□□□□□ -1.87
CSMD3-202ENST00000339701 JMJD7P0C870 316 aa3.37□□□□□ -1.87
CSMD3-202ENST00000339701 HIST1H2ADP20671 130 aa3.37□□□□□ -1.87
CSMD3-202ENST00000339701 ITGALP20701 1170 aa3.37□□□□□ -1.87
CSMD3-202ENST00000339701 PSMD4P55036 377 aaKnown RBP3.37□□□□□ -1.87
CSMD3-202ENST00000339701 SPIDRQ14159 915 aa3.37□□□□□ -1.87
CSMD3-202ENST00000339701 PDIA5Q14554 519 aa3.37□□□□□ -1.87
CSMD3-202ENST00000339701 SYT16Q17RD7 645 aa3.37□□□□□ -1.87
CSMD3-202ENST00000339701 FAM83EQ2M2I3 478 aa3.37□□□□□ -1.87
CSMD3-202ENST00000339701 ZNF568Q3ZCX4 644 aa3.37□□□□□ -1.87
CSMD3-202ENST00000339701 HIPK4Q8NE63 616 aa3.37□□□□□ -1.87
CSMD3-202ENST00000339701 PGBD1Q96JS3 809 aa3.37□□□□□ -1.87
CSMD3-202ENST00000339701 HIST1H2AHQ96KK5 128 aa3.37□□□□□ -1.87
CSMD3-202ENST00000339701 TBCBQ99426 244 aa3.37□□□□□ -1.87
CSMD3-202ENST00000339701 HIST1H2AJQ99878 128 aa3.37□□□□□ -1.87
CSMD3-202ENST00000339701 H2AFJQ9BTM1 129 aa3.37□□□□□ -1.87
CSMD3-202ENST00000339701 XRN2Q9H0D6 950 aaKnown RBP eCLIP3.37□□□□□ -1.87
CSMD3-202ENST00000339701 CERS4Q9HA82 394 aa3.37□□□□□ -1.87
CSMD3-202ENST00000339701 PCMTD2Q9NV79 361 aa3.37□□□□□ -1.87
CSMD3-202ENST00000339701 DZANK1Q9NVP4 752 aa3.37□□□□□ -1.87
CSMD3-202ENST00000339701 STOX2Q9P2F5 926 aaPredicted RBP3.37□□□□□ -1.87
CSMD3-202ENST00000339701 ATXN10Q9UBB4 475 aa3.37□□□□□ -1.87
CSMD3-202ENST00000339701 DDX20Q9UHI6 824 aaKnown RBP3.37□□□□□ -1.87
CSMD3-202ENST00000339701 POLG2Q9UHN1 485 aa3.37□□□□□ -1.87
CSMD3-202ENST00000339701 CDH7Q9ULB5 785 aa3.37□□□□□ -1.87
CSMD3-202ENST00000339701 FAM205AQ6ZU69 1335 aa3.36□□□□□ -1.87
CSMD3-202ENST00000339701 COL18A1P39060 1754 aa3.36□□□□□ -1.87
CSMD3-202ENST00000339701 A0A087WXM4 84 aa3.36□□□□□ -1.87
CSMD3-202ENST00000339701 PRR5-ARHGAP8B1AHC4 643 aa3.36□□□□□ -1.87
CSMD3-202ENST00000339701 AGRPO00253 132 aa3.36□□□□□ -1.87
CSMD3-202ENST00000339701 PEX12O00623 359 aa3.36□□□□□ -1.87
CSMD3-202ENST00000339701 PRMT5O14744 637 aaPredicted RBP3.36□□□□□ -1.87
CSMD3-202ENST00000339701 SLC16A3O15427 465 aaKnown RBP3.36□□□□□ -1.87
CSMD3-202ENST00000339701 PPP1R37O75864 691 aa3.36□□□□□ -1.87
CSMD3-202ENST00000339701 TSPAN9O75954 239 aa3.36□□□□□ -1.87
CSMD3-202ENST00000339701 ZBED1O96006 694 aa3.36□□□□□ -1.87
CSMD3-202ENST00000339701 NTRK1P04629 796 aa3.36□□□□□ -1.87
CSMD3-202ENST00000339701 IMPDH2P12268 514 aa3.36□□□□□ -1.87
CSMD3-202ENST00000339701 EIF2AK2P19525 551 aaKnown RBP3.36□□□□□ -1.87
CSMD3-202ENST00000339701 ADORA2AP29274 412 aa3.36□□□□□ -1.87
CSMD3-202ENST00000339701 RCVRNP35243 200 aa3.36□□□□□ -1.87
CSMD3-202ENST00000339701 SLC26A2P50443 739 aa3.36□□□□□ -1.87
CSMD3-202ENST00000339701 HERVK_113P62684 666 aa3.36□□□□□ -1.87
CSMD3-202ENST00000339701 MSLNQ13421 630 aaPredicted RBP3.36□□□□□ -1.87
CSMD3-202ENST00000339701 C6orf132Q5T0Z8 1188 aa3.36□□□□□ -1.87
CSMD3-202ENST00000339701 DNAJC24Q6P3W2 148 aa3.36□□□□□ -1.87
CSMD3-202ENST00000339701 LRRC8DQ7L1W4 858 aa3.36□□□□□ -1.87
CSMD3-202ENST00000339701 ZSCAN2Q7Z7L9 614 aaPredicted RBP3.36□□□□□ -1.87
CSMD3-202ENST00000339701 UNC45BQ8IWX7 931 aa3.36□□□□□ -1.87
CSMD3-202ENST00000339701 DEPDC4Q8N2C3 294 aa3.36□□□□□ -1.87
CSMD3-202ENST00000339701 IDI2Q9BXS1 227 aa3.36□□□□□ -1.87
CSMD3-202ENST00000339701 RMND5AQ9H871 391 aa3.36□□□□□ -1.87
CSMD3-202ENST00000339701 COG4Q9H9E3 785 aa3.36□□□□□ -1.87
CSMD3-202ENST00000339701 A1CFQ9NQ94 594 aaKnown RBP3.36□□□□□ -1.87
CSMD3-202ENST00000339701 IMPAD1Q9NX62 359 aa3.36□□□□□ -1.87
CSMD3-202ENST00000339701 GLS2Q9UI32 602 aa3.36□□□□□ -1.87
CSMD3-202ENST00000339701 MDM4O15151 490 aa3.36□□□□□ -1.87
CSMD3-202ENST00000339701 CCNB2O95067 398 aa3.36□□□□□ -1.87
CSMD3-202ENST00000339701 APOC1P02654 83 aa3.36□□□□□ -1.87
CSMD3-202ENST00000339701 MSH3P20585 1137 aa3.36□□□□□ -1.87
CSMD3-202ENST00000339701 KITLGP21583 273 aa3.36□□□□□ -1.87
CSMD3-202ENST00000339701 GCSHP23434 173 aa3.36□□□□□ -1.87
CSMD3-202ENST00000339701 HMOX2P30519 316 aa3.36□□□□□ -1.87
CSMD3-202ENST00000339701 VEGFBP49765 207 aa3.36□□□□□ -1.87
CSMD3-202ENST00000339701 DGKEP52429 567 aa3.36□□□□□ -1.87
CSMD3-202ENST00000339701 PSME3P61289 254 aa3.36□□□□□ -1.87
CSMD3-202ENST00000339701 PPP2R2AP63151 447 aa3.36□□□□□ -1.87
CSMD3-202ENST00000339701 ALG11Q2TAA5 492 aa3.36□□□□□ -1.87
CSMD3-202ENST00000339701 CNPY1Q3B7I2 92 aa3.36□□□□□ -1.87
CSMD3-202ENST00000339701 TTC23Q5W5X9 447 aa3.36□□□□□ -1.87
CSMD3-202ENST00000339701 HIBCHQ6NVY1 386 aaPredicted RBP3.36□□□□□ -1.87
CSMD3-202ENST00000339701 PLD3Q8IV08 490 aa3.36□□□□□ -1.87
CSMD3-202ENST00000339701 MIER2Q8N344 545 aa3.36□□□□□ -1.87
CSMD3-202ENST00000339701 DPP10Q8N608 796 aa3.36□□□□□ -1.87
CSMD3-202ENST00000339701 OR6B3Q8NGW1 331 aa3.36□□□□□ -1.87
CSMD3-202ENST00000339701 WDR48Q8TAF3 677 aa3.36□□□□□ -1.87
CSMD3-202ENST00000339701 FAM149B1Q96BN6 582 aa3.36□□□□□ -1.87
CSMD3-202ENST00000339701 LGMNQ99538 433 aa3.36□□□□□ -1.87
CSMD3-202ENST00000339701 MNTQ99583 582 aa3.36□□□□□ -1.87
CSMD3-202ENST00000339701 EPB41L4BQ9H329 900 aa3.36□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms