RNA–Protein interactions for RNA: ENST00000339488.8

PTCHD4-201, Transcript of patched domain containing 4, humanhuman

APPRIS P1 TSL 2 BASIC

Gene PTCHD4, Length 2,850 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCHD4-201ENST00000339488 SMCO2A6NFE2 343 aa9.91□□□□□ -0.82
PTCHD4-201ENST00000339488 TRIM77I1YAP6 450 aa9.91□□□□□ -0.82
PTCHD4-201ENST00000339488 SNAP23O00161 211 aa9.91□□□□□ -0.82
PTCHD4-201ENST00000339488 OR52Z1P0C646 297 aa9.91□□□□□ -0.82
PTCHD4-201ENST00000339488 CCNA2P20248 432 aa9.91□□□□□ -0.82
PTCHD4-201ENST00000339488 CBLP22681 906 aa9.91□□□□□ -0.82
PTCHD4-201ENST00000339488 IL32P24001 234 aa9.91□□□□□ -0.82
PTCHD4-201ENST00000339488 MLLT6P55198 1093 aaPredicted RBP9.91□□□□□ -0.82
PTCHD4-201ENST00000339488 CASP7P55210 303 aa9.91□□□□□ -0.82
PTCHD4-201ENST00000339488 MTX3Q5HYI7 312 aa9.91□□□□□ -0.82
PTCHD4-201ENST00000339488 TTC33Q6PID6 262 aaPredicted RBP9.91□□□□□ -0.82
PTCHD4-201ENST00000339488 SPATC1Q76KD6 591 aa9.91□□□□□ -0.82
PTCHD4-201ENST00000339488 HID1Q8IV36 788 aa9.91□□□□□ -0.82
PTCHD4-201ENST00000339488 CCDC24Q8N4L8 307 aa9.91□□□□□ -0.82
PTCHD4-201ENST00000339488 FAM110BQ8TC76 370 aa9.91□□□□□ -0.82
PTCHD4-201ENST00000339488 ZC3H15Q8WU90 426 aaKnown RBP9.91□□□□□ -0.82
PTCHD4-201ENST00000339488 ATP6V1E2Q96A05 226 aa9.91□□□□□ -0.82
PTCHD4-201ENST00000339488 RMDN1Q96DB5 314 aa9.91□□□□□ -0.82
PTCHD4-201ENST00000339488 CALML4Q96GE6 196 aa9.91□□□□□ -0.82
PTCHD4-201ENST00000339488 DEPDC7Q96QD5 511 aa9.91□□□□□ -0.82
PTCHD4-201ENST00000339488 IER2Q9BTL4 223 aa9.91□□□□□ -0.82
PTCHD4-201ENST00000339488 SLC13A1Q9BZW2 595 aa9.91□□□□□ -0.82
PTCHD4-201ENST00000339488 CFL2Q9Y281 166 aa9.91□□□□□ -0.82
PTCHD4-201ENST00000339488 PHRF1Q9P1Y6 1649 aaKnown RBP9.91□□□□□ -0.82
PTCHD4-201ENST00000339488 ARPC4-TTLL3A0A0A6YYG9 625 aa9.91□□□□□ -0.82
PTCHD4-201ENST00000339488 A0A0G2JMP0 313 aa9.91□□□□□ -0.82
PTCHD4-201ENST00000339488 ARHGEF35A5YM69 484 aa9.91□□□□□ -0.82
PTCHD4-201ENST00000339488 CLIC2O15247 247 aa9.91□□□□□ -0.82
PTCHD4-201ENST00000339488 TGDSO95455 350 aa9.91□□□□□ -0.82
PTCHD4-201ENST00000339488 DLGAP3O95886 979 aa9.91□□□□□ -0.82
PTCHD4-201ENST00000339488 FOSL1P15407 271 aa9.91□□□□□ -0.82
PTCHD4-201ENST00000339488 CFL1P23528 166 aaKnown RBP9.91□□□□□ -0.82
PTCHD4-201ENST00000339488 QARSP47897 775 aaKnown RBP9.91□□□□□ -0.82
PTCHD4-201ENST00000339488 SLC9A3P48764 834 aa9.91□□□□□ -0.82
PTCHD4-201ENST00000339488 CLCNKBP51801 687 aa9.91□□□□□ -0.82
PTCHD4-201ENST00000339488 ECM1Q16610 540 aa9.91□□□□□ -0.82
PTCHD4-201ENST00000339488 FAM91A1Q658Y4 838 aa9.91□□□□□ -0.82
PTCHD4-201ENST00000339488 CCDC33Q8N5R6 958 aa9.91□□□□□ -0.82
PTCHD4-201ENST00000339488 LRTOMTQ8WZ04 291 aa9.91□□□□□ -0.82
PTCHD4-201ENST00000339488 SH3YL1Q96HL8 342 aaPredicted RBP9.91□□□□□ -0.82
PTCHD4-201ENST00000339488 NGLY1Q96IV0 654 aa9.91□□□□□ -0.82
PTCHD4-201ENST00000339488 PPP1R36Q96LQ0 422 aa9.91□□□□□ -0.82
PTCHD4-201ENST00000339488 AIFM2Q9BRQ8 373 aa9.91□□□□□ -0.82
PTCHD4-201ENST00000339488 C1orf21Q9H246 121 aa9.91□□□□□ -0.82
PTCHD4-201ENST00000339488 STMN3Q9NZ72 180 aa9.91□□□□□ -0.82
PTCHD4-201ENST00000339488 SENP1Q9P0U3 644 aa9.91□□□□□ -0.82
PTCHD4-201ENST00000339488 NXF1Q9UBU9 619 aaKnown RBP9.91□□□□□ -0.82
PTCHD4-201ENST00000339488 STRIP2Q9ULQ0 834 aa9.91□□□□□ -0.82
PTCHD4-201ENST00000339488 PCDHA6Q9UN73 950 aa9.91□□□□□ -0.82
PTCHD4-201ENST00000339488 SLC8A2Q9UPR5 921 aa9.91□□□□□ -0.82
PTCHD4-201ENST00000339488 PCDHA8Q9Y5H6 950 aa9.91□□□□□ -0.82
PTCHD4-201ENST00000339488 LTN1O94822 1766 aa9.91□□□□□ -0.82
PTCHD4-201ENST00000339488 SLIT3O75094 1523 aa9.9□□□□□ -0.82
PTCHD4-201ENST00000339488 LRP6O75581 1613 aa9.9□□□□□ -0.82
PTCHD4-201ENST00000339488 PRR23AA6NEV1 266 aa9.9□□□□□ -0.82
PTCHD4-201ENST00000339488 MIF4GDA9UHW6 222 aaKnown RBP9.9□□□□□ -0.82
PTCHD4-201ENST00000339488 B8ZZF3 427 aa9.9□□□□□ -0.82
PTCHD4-201ENST00000339488 FOXN3O00409 490 aaPredicted RBP9.9□□□□□ -0.82
PTCHD4-201ENST00000339488 B4GAT1O43505 415 aa9.9□□□□□ -0.82
PTCHD4-201ENST00000339488 GCP02774 474 aa9.9□□□□□ -0.82
PTCHD4-201ENST00000339488 NCAM1P13591 858 aa9.9□□□□□ -0.82
PTCHD4-201ENST00000339488 GFAPP14136 432 aa9.9□□□□□ -0.82
PTCHD4-201ENST00000339488 DCKP27707 260 aa9.9□□□□□ -0.82
PTCHD4-201ENST00000339488 ALDH4A1P30038 563 aa9.9□□□□□ -0.82
PTCHD4-201ENST00000339488 ETV4P43268 484 aa9.9□□□□□ -0.82
PTCHD4-201ENST00000339488 SLC18A1P54219 525 aa9.9□□□□□ -0.82
PTCHD4-201ENST00000339488 TNK2Q07912 1038 aa9.9□□□□□ -0.82
PTCHD4-201ENST00000339488 TROAPQ12815 778 aa9.9□□□□□ -0.82
PTCHD4-201ENST00000339488 PLEKHG7Q6ZR37 379 aa9.9□□□□□ -0.82
PTCHD4-201ENST00000339488 KCTD8Q6ZWB6 473 aa9.9□□□□□ -0.82
PTCHD4-201ENST00000339488 HEATR3Q7Z4Q2 680 aa9.9□□□□□ -0.82
PTCHD4-201ENST00000339488 TPH2Q8IWU9 490 aa9.9□□□□□ -0.82
PTCHD4-201ENST00000339488 LRRC47Q8N1G4 583 aaKnown RBP9.9□□□□□ -0.82
PTCHD4-201ENST00000339488 PARP8Q8N3A8 854 aa9.9□□□□□ -0.82
PTCHD4-201ENST00000339488 ADAM32Q8TC27 787 aa9.9□□□□□ -0.82
PTCHD4-201ENST00000339488 TGFBRAP1Q8WUH2 860 aa9.9□□□□□ -0.82
PTCHD4-201ENST00000339488 METTL2AQ96IZ6 378 aaKnown RBP9.9□□□□□ -0.82
PTCHD4-201ENST00000339488 CSF3RQ99062 836 aa9.9□□□□□ -0.82
PTCHD4-201ENST00000339488 TTYH2Q9BSA4 534 aa9.9□□□□□ -0.82
PTCHD4-201ENST00000339488 CHID1Q9BWS9 393 aa9.9□□□□□ -0.82
PTCHD4-201ENST00000339488 IDI2Q9BXS1 227 aa9.9□□□□□ -0.82
PTCHD4-201ENST00000339488 TRPV6Q9H1D0 765 aa9.9□□□□□ -0.82
PTCHD4-201ENST00000339488 SOX17Q9H6I2 414 aaPredicted RBP9.9□□□□□ -0.82
PTCHD4-201ENST00000339488 WASH6PQ9NQA3 447 aa9.9□□□□□ -0.82
PTCHD4-201ENST00000339488 PCDH10Q9P2E7 1040 aa9.9□□□□□ -0.82
PTCHD4-201ENST00000339488 CPNE7Q9UBL6 633 aa9.9□□□□□ -0.82
PTCHD4-201ENST00000339488 ATPIF1Q9UII2 106 aa9.9□□□□□ -0.82
PTCHD4-201ENST00000339488 PMF1-BGLAPU3KQ54 211 aa9.9□□□□□ -0.82
PTCHD4-201ENST00000339488 ABCA3Q99758 1704 aa9.9□□□□□ -0.82
PTCHD4-201ENST00000339488 SDR42E2A6NKP2 422 aa9.9□□□□□ -0.82
PTCHD4-201ENST00000339488 POLR1CO15160 346 aaPredicted RBP9.9□□□□□ -0.82
PTCHD4-201ENST00000339488 AXIN1O15169 862 aa9.9□□□□□ -0.82
PTCHD4-201ENST00000339488 DCXO43602 365 aa9.9□□□□□ -0.82
PTCHD4-201ENST00000339488 SPAG6O75602 509 aa9.9□□□□□ -0.82
PTCHD4-201ENST00000339488 MT-ND3P03897 115 aa9.9□□□□□ -0.82
PTCHD4-201ENST00000339488 SERPINA6P08185 405 aa9.9□□□□□ -0.82
PTCHD4-201ENST00000339488 CASP3P42574 277 aa9.9□□□□□ -0.82
PTCHD4-201ENST00000339488 NT5C2P49902 561 aa9.9□□□□□ -0.82
PTCHD4-201ENST00000339488 NUDT2P50583 147 aa9.9□□□□□ -0.82
PTCHD4-201ENST00000339488 HSPA14Q0VDF9 509 aa9.9□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms