RNA–Protein interactions for RNA: ENST00000334527.11

NDEL1-201, Transcript of nudE neurodevelopment protein 1 like 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NDEL1, Length 2,372 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDEL1-201ENST00000334527 BSPRYQ5W0U4 402 aa24.08■■□□□ 1.45
NDEL1-201ENST00000334527 TREML1Q86YW5 311 aa24.08■■□□□ 1.45
NDEL1-201ENST00000334527 P2RY11Q96G91 374 aa24.08■■□□□ 1.45
NDEL1-201ENST00000334527 STRNO43815 780 aa24.08■■□□□ 1.44
NDEL1-201ENST00000334527 PITX1P78337 314 aaPredicted RBP24.08■■□□□ 1.44
NDEL1-201ENST00000334527 MDH1BQ5I0G3 518 aa24.08■■□□□ 1.44
NDEL1-201ENST00000334527 KYAT3Q6YP21 454 aaKnown RBP24.08■■□□□ 1.44
NDEL1-201ENST00000334527 PIGZQ86VD9 579 aa24.08■■□□□ 1.44
NDEL1-201ENST00000334527 PPP1R14CQ8TAE6 165 aa24.08■■□□□ 1.44
NDEL1-201ENST00000334527 CDKL2Q92772 493 aa24.08■■□□□ 1.44
NDEL1-201ENST00000334527 SLC10A4Q96EP9 437 aa24.08■■□□□ 1.44
NDEL1-201ENST00000334527 SEPT10Q9P0V9 454 aa24.08■■□□□ 1.44
NDEL1-201ENST00000334527 MYO18AQ92614 2054 aaKnown RBP24.08■■□□□ 1.44
NDEL1-201ENST00000334527 PDCD11Q14690 1871 aaKnown RBP24.08■■□□□ 1.44
NDEL1-201ENST00000334527 H3BRJ5 948 aa24.07■■□□□ 1.44
NDEL1-201ENST00000334527 XPO1O14980 1071 aaKnown RBP24.07■■□□□ 1.44
NDEL1-201ENST00000334527 SESN3P58005 492 aa24.07■■□□□ 1.44
NDEL1-201ENST00000334527 CDK18Q07002 472 aa24.07■■□□□ 1.44
NDEL1-201ENST00000334527 RCN1Q15293 331 aa24.07■■□□□ 1.44
NDEL1-201ENST00000334527 CCDC6Q16204 474 aa24.07■■□□□ 1.44
NDEL1-201ENST00000334527 FASTKD1Q53R41 847 aaKnown RBP24.07■■□□□ 1.44
NDEL1-201ENST00000334527 C16orf46Q6P387 395 aa24.07■■□□□ 1.44
NDEL1-201ENST00000334527 PACS1Q6VY07 963 aa24.07■■□□□ 1.44
NDEL1-201ENST00000334527 RNF139Q8WU17 664 aa24.07■■□□□ 1.44
NDEL1-201ENST00000334527 FAM167BQ9BTA0 163 aa24.07■■□□□ 1.44
NDEL1-201ENST00000334527 XPNPEP3Q9NQH7 507 aa24.07■■□□□ 1.44
NDEL1-201ENST00000334527 THAP1Q9NVV9 213 aa24.07■■□□□ 1.44
NDEL1-201ENST00000334527 PIN4Q9Y237 131 aaKnown RBP24.07■■□□□ 1.44
NDEL1-201ENST00000334527 PCNTO95613 3336 aa24.07■■□□□ 1.44
NDEL1-201ENST00000334527 B2RBV5 119 aa24.07■■□□□ 1.44
NDEL1-201ENST00000334527 ADCY6O43306 1168 aa24.07■■□□□ 1.44
NDEL1-201ENST00000334527 OPHN1O60890 802 aa24.07■■□□□ 1.44
NDEL1-201ENST00000334527 ALDOAP04075 364 aaKnown RBP24.07■■□□□ 1.44
NDEL1-201ENST00000334527 PGM1P36871 562 aa24.07■■□□□ 1.44
NDEL1-201ENST00000334527 TAF6P49848 677 aa24.07■■□□□ 1.44
NDEL1-201ENST00000334527 CDC42EP1Q00587 391 aa24.07■■□□□ 1.44
NDEL1-201ENST00000334527 CCNYQ8ND76 341 aa24.07■■□□□ 1.44
NDEL1-201ENST00000334527 WDR60Q8WVS4 1066 aa24.07■■□□□ 1.44
NDEL1-201ENST00000334527 DNAI2Q9GZS0 605 aa24.07■■□□□ 1.44
NDEL1-201ENST00000334527 EIF2B3Q9NR50 452 aaKnown RBP24.07■■□□□ 1.44
NDEL1-201ENST00000334527 STOML1Q9UBI4 398 aa24.07■■□□□ 1.44
NDEL1-201ENST00000334527 TPP1O14773 563 aa24.06■■□□□ 1.44
NDEL1-201ENST00000334527 KRT36O76013 467 aa24.06■■□□□ 1.44
NDEL1-201ENST00000334527 SMIM10L2AP0DMW4 78 aa24.06■■□□□ 1.44
NDEL1-201ENST00000334527 SMIM10L2BP0DMW5 78 aa24.06■■□□□ 1.44
NDEL1-201ENST00000334527 PGAM1P18669 254 aa24.06■■□□□ 1.44
NDEL1-201ENST00000334527 PSMB4P28070 264 aa24.06■■□□□ 1.44
NDEL1-201ENST00000334527 PNPLA4P41247 253 aa24.06■■□□□ 1.44
NDEL1-201ENST00000334527 RCN2Q14257 317 aa24.06■■□□□ 1.44
NDEL1-201ENST00000334527 OTUD1Q5VV17 481 aaPredicted RBP24.06■■□□□ 1.44
NDEL1-201ENST00000334527 PSTKQ8IV42 348 aaKnown RBP24.06■■□□□ 1.44
NDEL1-201ENST00000334527 ARHGAP24Q8N264 748 aa24.06■■□□□ 1.44
NDEL1-201ENST00000334527 B3GALNT2Q8NCR0 500 aa24.06■■□□□ 1.44
NDEL1-201ENST00000334527 ARNTL2Q8WYA1 636 aa24.06■■□□□ 1.44
NDEL1-201ENST00000334527 MAML3Q96JK9 1138 aa24.06■■□□□ 1.44
NDEL1-201ENST00000334527 TNIP3Q96KP6 325 aa24.06■■□□□ 1.44
NDEL1-201ENST00000334527 RILPQ96NA2 401 aa24.06■■□□□ 1.44
NDEL1-201ENST00000334527 RNF39Q9H2S5 420 aa24.06■■□□□ 1.44
NDEL1-201ENST00000334527 CREB3O43889 395 aa24.06■■□□□ 1.44
NDEL1-201ENST00000334527 DAB1O75553 588 aa24.06■■□□□ 1.44
NDEL1-201ENST00000334527 CYP2C9P11712 490 aa24.06■■□□□ 1.44
NDEL1-201ENST00000334527 ABL2P42684 1182 aa24.06■■□□□ 1.44
NDEL1-201ENST00000334527 ALDH18A1P54886 795 aaKnown RBP24.06■■□□□ 1.44
NDEL1-201ENST00000334527 SOX4Q06945 474 aaPredicted RBP24.06■■□□□ 1.44
NDEL1-201ENST00000334527 SMAD1Q15797 465 aaKnown RBP24.06■■□□□ 1.44
NDEL1-201ENST00000334527 LDLRAD1Q5T700 205 aa24.06■■□□□ 1.44
NDEL1-201ENST00000334527 N4BP2L1Q5TBK1 243 aaPredicted RBP24.06■■□□□ 1.44
NDEL1-201ENST00000334527 NME8Q8N427 588 aa24.06■■□□□ 1.44
NDEL1-201ENST00000334527 ACMSDQ8TDX5 336 aa24.06■■□□□ 1.44
NDEL1-201ENST00000334527 FERMT1Q9BQL6 677 aa24.06■■□□□ 1.44
NDEL1-201ENST00000334527 EMCNQ9ULC0 261 aa24.06■■□□□ 1.44
NDEL1-201ENST00000334527 ZNF638Q14966 1978 aaKnown RBP24.05■■□□□ 1.44
NDEL1-201ENST00000334527 HUS1O60921 280 aa24.05■■□□□ 1.44
NDEL1-201ENST00000334527 GSRP00390 522 aa24.05■■□□□ 1.44
NDEL1-201ENST00000334527 GLUD2P49448 558 aa24.05■■□□□ 1.44
NDEL1-201ENST00000334527 PDE1CQ14123 709 aaPredicted RBP24.05■■□□□ 1.44
NDEL1-201ENST00000334527 SV2CQ496J9 727 aa24.05■■□□□ 1.44
NDEL1-201ENST00000334527 STXBP5Q5T5C0 1151 aa24.05■■□□□ 1.44
NDEL1-201ENST00000334527 TMPRSS6Q8IU80 811 aa24.05■■□□□ 1.44
NDEL1-201ENST00000334527 SYBUQ9NX95 663 aa24.05■■□□□ 1.44
NDEL1-201ENST00000334527 PSAT1Q9Y617 370 aa24.05■■□□□ 1.44
NDEL1-201ENST00000334527 CLDN5O00501 218 aa24.05■■□□□ 1.44
NDEL1-201ENST00000334527 XPOTO43592 962 aaKnown RBP24.05■■□□□ 1.44
NDEL1-201ENST00000334527 GLRA3O75311 464 aa24.05■■□□□ 1.44
NDEL1-201ENST00000334527 ATP6V1C1P21283 382 aa24.05■■□□□ 1.44
NDEL1-201ENST00000334527 RPL10AP62906 217 aaKnown RBP24.05■■□□□ 1.44
NDEL1-201ENST00000334527 WASHC5Q12768 1159 aa24.05■■□□□ 1.44
NDEL1-201ENST00000334527 CCNJLQ8IV13 435 aa24.05■■□□□ 1.44
NDEL1-201ENST00000334527 FBXO27Q8NI29 283 aa24.05■■□□□ 1.44
NDEL1-201ENST00000334527 STMN2Q93045 179 aa24.05■■□□□ 1.44
NDEL1-201ENST00000334527 PGBD4Q96DM1 585 aa24.05■■□□□ 1.44
NDEL1-201ENST00000334527 LBHD1Q9BQE6 289 aaPredicted RBP24.05■■□□□ 1.44
NDEL1-201ENST00000334527 ABHD16BQ9H3Z7 469 aa24.05■■□□□ 1.44
NDEL1-201ENST00000334527 PSMG1O95456 288 aa24.04■■□□□ 1.44
NDEL1-201ENST00000334527 KDSRQ06136 332 aa24.04■■□□□ 1.44
NDEL1-201ENST00000334527 NME3Q13232 169 aa24.04■■□□□ 1.44
NDEL1-201ENST00000334527 PDK1Q15118 436 aa24.04■■□□□ 1.44
NDEL1-201ENST00000334527 PCBP1Q15365 356 aaKnown RBP eCLIP24.04■■□□□ 1.44
NDEL1-201ENST00000334527 TSNAXIP1Q2TAA8 658 aa24.04■■□□□ 1.44
NDEL1-201ENST00000334527 MBLAC2Q68D91 279 aa24.04■■□□□ 1.44
Retrieved 100 of 20,778 RNA–protein pairs in 48.7 ms