RNA–Protein interactions for RNA: ENST00000334414.10

PTPRB-202, Transcript of protein tyrosine phosphatase, receptor type B, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene PTPRB, Length 12,316 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRB-202ENST00000334414 ASTN2O75129 1339 aaPredicted RBP5.65□□□□□ -1.51
PTPRB-202ENST00000334414 APOL3O95236 402 aa5.65□□□□□ -1.51
PTPRB-202ENST00000334414 CYP1A1P04798 512 aaPredicted RBP5.65□□□□□ -1.51
PTPRB-202ENST00000334414 AKR1B1P15121 316 aa5.65□□□□□ -1.51
PTPRB-202ENST00000334414 ZNF24P17028 368 aa5.65□□□□□ -1.51
PTPRB-202ENST00000334414 NEK3P51956 506 aa5.65□□□□□ -1.51
PTPRB-202ENST00000334414 RBM44Q6ZP01 1051 aaKnown RBP5.65□□□□□ -1.51
PTPRB-202ENST00000334414 TMEM126BQ8IUX1 230 aa5.65□□□□□ -1.51
PTPRB-202ENST00000334414 FCGR1BQ92637 280 aa5.65□□□□□ -1.51
PTPRB-202ENST00000334414 ZNF496Q96IT1 587 aaPredicted RBP5.65□□□□□ -1.51
PTPRB-202ENST00000334414 POLR1BQ9H9Y6 1135 aa5.65□□□□□ -1.51
PTPRB-202ENST00000334414 SSU72Q9NP77 194 aaKnown RBP5.65□□□□□ -1.51
PTPRB-202ENST00000334414 NAGPAQ9UK23 515 aa5.65□□□□□ -1.51
PTPRB-202ENST00000334414 DNAJC16Q9Y2G8 782 aa5.65□□□□□ -1.51
PTPRB-202ENST00000334414 TULP3O75386 442 aa5.64□□□□□ -1.51
PTPRB-202ENST00000334414 TRMUO75648 421 aaKnown RBP5.64□□□□□ -1.51
PTPRB-202ENST00000334414 PDGFRAP16234 1089 aa5.64□□□□□ -1.51
PTPRB-202ENST00000334414 PCSK1P29120 753 aa5.64□□□□□ -1.51
PTPRB-202ENST00000334414 MAGEA2P43356 314 aa5.64□□□□□ -1.51
PTPRB-202ENST00000334414 SLC5A9Q2M3M2 681 aa5.64□□□□□ -1.51
PTPRB-202ENST00000334414 LACTB2Q53H82 288 aaPredicted RBP5.64□□□□□ -1.51
PTPRB-202ENST00000334414 C6orf52Q5T4I8 152 aa5.64□□□□□ -1.51
PTPRB-202ENST00000334414 DCUN1D5Q9BTE7 237 aa5.64□□□□□ -1.51
PTPRB-202ENST00000334414 MAN2B2Q9Y2E5 1009 aa5.64□□□□□ -1.51
PTPRB-202ENST00000334414 SFI1A8K8P3 1242 aa5.64□□□□□ -1.51
PTPRB-202ENST00000334414 CHADO15335 359 aa5.64□□□□□ -1.51
PTPRB-202ENST00000334414 FASTKQ14296 549 aaKnown RBP5.64□□□□□ -1.51
PTPRB-202ENST00000334414 DGKDQ16760 1214 aa5.64□□□□□ -1.51
PTPRB-202ENST00000334414 DCAF4L1Q3SXM0 396 aa5.64□□□□□ -1.51
PTPRB-202ENST00000334414 FAM228AQ86W67 206 aa5.64□□□□□ -1.51
PTPRB-202ENST00000334414 TRPV3Q8NET8 790 aa5.64□□□□□ -1.51
PTPRB-202ENST00000334414 BHLHE22Q8NFJ8 381 aaPredicted RBP5.64□□□□□ -1.51
PTPRB-202ENST00000334414 EZH1Q92800 747 aaPredicted RBP5.64□□□□□ -1.51
PTPRB-202ENST00000334414 OSBP2Q969R2 916 aa5.64□□□□□ -1.51
PTPRB-202ENST00000334414 ATXN7L3BQ96GX2 97 aa5.64□□□□□ -1.51
PTPRB-202ENST00000334414 MTF2Q9Y483 593 aaPredicted RBP5.64□□□□□ -1.51
PTPRB-202ENST00000334414 ZCCHC11Q5TAX3 1644 aaKnown RBP5.64□□□□□ -1.51
PTPRB-202ENST00000334414 HEG1Q9ULI3 1381 aa5.64□□□□□ -1.51
PTPRB-202ENST00000334414 MGAT4DA6NG13 374 aa5.64□□□□□ -1.51
PTPRB-202ENST00000334414 SLC16A4O15374 487 aa5.64□□□□□ -1.51
PTPRB-202ENST00000334414 EPHB2P29323 1055 aa5.64□□□□□ -1.51
PTPRB-202ENST00000334414 CBX3Q13185 183 aa5.64□□□□□ -1.51
PTPRB-202ENST00000334414 HKDC1Q2TB90 917 aa5.64□□□□□ -1.51
PTPRB-202ENST00000334414 SUPT20HL1Q3ZLR7 823 aa5.64□□□□□ -1.51
PTPRB-202ENST00000334414 BHLHB9Q6PI77 547 aa5.64□□□□□ -1.51
PTPRB-202ENST00000334414 RIPOR1Q6ZS17 1223 aa5.64□□□□□ -1.51
PTPRB-202ENST00000334414 PPP1R36Q96LQ0 422 aa5.64□□□□□ -1.51
PTPRB-202ENST00000334414 STRBPQ96SI9 672 aaKnown RBP5.64□□□□□ -1.51
PTPRB-202ENST00000334414 S100A13Q99584 98 aa5.64□□□□□ -1.51
PTPRB-202ENST00000334414 NT5C1AQ9BXI3 368 aa5.64□□□□□ -1.51
PTPRB-202ENST00000334414 SCAF8Q9UPN6 1271 aaKnown RBP5.64□□□□□ -1.51
PTPRB-202ENST00000334414 CLEC11AQ9Y240 323 aa5.64□□□□□ -1.51
PTPRB-202ENST00000334414 TMEM2Q9UHN6 1383 aa5.64□□□□□ -1.51
PTPRB-202ENST00000334414 PRMT3O60678 531 aa5.64□□□□□ -1.51
PTPRB-202ENST00000334414 SERPINA1P01009 418 aa5.64□□□□□ -1.51
PTPRB-202ENST00000334414 TFE3P19532 575 aaPredicted RBP5.64□□□□□ -1.51
PTPRB-202ENST00000334414 PPIBP23284 216 aaKnown RBP5.64□□□□□ -1.51
PTPRB-202ENST00000334414 PTX3P26022 381 aaPredicted RBP5.64□□□□□ -1.51
PTPRB-202ENST00000334414 ALDH6A1Q02252 535 aaKnown RBP5.64□□□□□ -1.51
PTPRB-202ENST00000334414 CATSPER4Q7RTX7 472 aa5.64□□□□□ -1.51
PTPRB-202ENST00000334414 PEX5LQ8IYB4 626 aa5.64□□□□□ -1.51
PTPRB-202ENST00000334414 STK40Q8N2I9 435 aa5.64□□□□□ -1.51
PTPRB-202ENST00000334414 GALNT15Q8N3T1 639 aa5.64□□□□□ -1.51
PTPRB-202ENST00000334414 DCPSQ96C86 337 aaKnown RBP5.64□□□□□ -1.51
PTPRB-202ENST00000334414 RPS6KL1Q9Y6S9 549 aa5.64□□□□□ -1.51
PTPRB-202ENST00000334414 GRK4P32298 578 aa5.64□□□□□ -1.51
PTPRB-202ENST00000334414 GRIK3Q13003 919 aa5.64□□□□□ -1.51
PTPRB-202ENST00000334414 TMEM132DQ14C87 1099 aa5.64□□□□□ -1.51
PTPRB-202ENST00000334414 PDK4Q16654 411 aa5.64□□□□□ -1.51
PTPRB-202ENST00000334414 GALNTL6Q49A17 601 aa5.64□□□□□ -1.51
PTPRB-202ENST00000334414 SMIM5Q71RC9 77 aa5.64□□□□□ -1.51
PTPRB-202ENST00000334414 ZSCAN2Q7Z7L9 614 aaPredicted RBP5.64□□□□□ -1.51
PTPRB-202ENST00000334414 ZNF75CPQ92670 426 aaPredicted RBP5.64□□□□□ -1.51
PTPRB-202ENST00000334414 CDH19Q9H159 772 aa5.64□□□□□ -1.51
PTPRB-202ENST00000334414 REEP1Q9H902 201 aa5.64□□□□□ -1.51
PTPRB-202ENST00000334414 JPH1Q9HDC5 661 aaPredicted RBP5.64□□□□□ -1.51
PTPRB-202ENST00000334414 PCSK1NQ9UHG2 260 aa5.64□□□□□ -1.51
PTPRB-202ENST00000334414 SLC12A4Q9UP95 1085 aa5.64□□□□□ -1.51
PTPRB-202ENST00000334414 RUVBL2Q9Y230 463 aaKnown RBP5.64□□□□□ -1.51
PTPRB-202ENST00000334414 ATP9BO43861 1147 aa5.64□□□□□ -1.51
PTPRB-202ENST00000334414 S100A12P80511 92 aa5.64□□□□□ -1.51
PTPRB-202ENST00000334414 C1QBPQ07021 282 aaKnown RBP5.64□□□□□ -1.51
PTPRB-202ENST00000334414 TRIM74Q86UV6 250 aa5.64□□□□□ -1.51
PTPRB-202ENST00000334414 TRIM73Q86UV7 250 aa5.64□□□□□ -1.51
PTPRB-202ENST00000334414 SLITRK4Q8IW52 837 aa5.64□□□□□ -1.51
PTPRB-202ENST00000334414 SVOPLQ8N434 492 aa5.64□□□□□ -1.51
PTPRB-202ENST00000334414 HM13Q8TCT9 377 aa5.64□□□□□ -1.51
PTPRB-202ENST00000334414 KLHL32Q96NJ5 620 aa5.64□□□□□ -1.51
PTPRB-202ENST00000334414 RPRD1AQ96P16 312 aaPredicted RBP5.64□□□□□ -1.51
PTPRB-202ENST00000334414 TCF12Q99081 682 aa5.64□□□□□ -1.51
PTPRB-202ENST00000334414 GPC6Q9Y625 555 aaPredicted RBP5.64□□□□□ -1.51
PTPRB-202ENST00000334414 FRMPD4Q14CM0 1322 aa5.64□□□□□ -1.51
PTPRB-202ENST00000334414 TRIM38O00635 465 aa5.64□□□□□ -1.51
PTPRB-202ENST00000334414 HS6ST1O60243 411 aa5.64□□□□□ -1.51
PTPRB-202ENST00000334414 ITGA10O75578 1167 aa5.64□□□□□ -1.51
PTPRB-202ENST00000334414 DGKIO75912 1065 aa5.64□□□□□ -1.51
PTPRB-202ENST00000334414 PLEKHA8P1O95397 391 aa5.64□□□□□ -1.51
PTPRB-202ENST00000334414 MAPTP10636 758 aaKnown RBP5.64□□□□□ -1.51
PTPRB-202ENST00000334414 THRBP10828 461 aa5.64□□□□□ -1.51
PTPRB-202ENST00000334414 GYG1P46976 350 aa5.64□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms