RNA–Protein interactions for RNA: ENST00000334409.9

PDCD1-201, Transcript of programmed cell death 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDCD1, Length 2,114 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDCD1-201ENST00000334409 CFAP57Q96MR6 1250 aa17.51■□□□□ 0.39
PDCD1-201ENST00000334409 HERPUD2Q9BSE4 406 aa17.51■□□□□ 0.39
PDCD1-201ENST00000334409 FTHL17Q9BXU8 183 aa17.51■□□□□ 0.39
PDCD1-201ENST00000334409 SDCBP2Q9H190 292 aa17.51■□□□□ 0.39
PDCD1-201ENST00000334409 TRABDQ9H4I3 376 aa17.51■□□□□ 0.39
PDCD1-201ENST00000334409 TBK1Q9UHD2 729 aa17.51■□□□□ 0.39
PDCD1-201ENST00000334409 CHMP2BQ9UQN3 213 aa17.51■□□□□ 0.39
PDCD1-201ENST00000334409 TANC1Q9C0D5 1861 aa17.5■□□□□ 0.39
PDCD1-201ENST00000334409 SPTLC1O15269 473 aa17.5■□□□□ 0.39
PDCD1-201ENST00000334409 OPHN1O60890 802 aa17.5■□□□□ 0.39
PDCD1-201ENST00000334409 RAG1P15918 1043 aa17.5■□□□□ 0.39
PDCD1-201ENST00000334409 ACO1P21399 889 aaKnown RBP17.5■□□□□ 0.39
PDCD1-201ENST00000334409 ADCY8P40145 1251 aa17.5■□□□□ 0.39
PDCD1-201ENST00000334409 CDC16Q13042 620 aa17.5■□□□□ 0.39
PDCD1-201ENST00000334409 TMCO4Q5TGY1 634 aa17.5■□□□□ 0.39
PDCD1-201ENST00000334409 LIN9Q5TKA1 542 aa17.5■□□□□ 0.39
PDCD1-201ENST00000334409 AAGABQ6PD74 315 aa17.5■□□□□ 0.39
PDCD1-201ENST00000334409 LIN28BQ6ZN17 250 aaKnown RBP eCLIP17.5■□□□□ 0.39
PDCD1-201ENST00000334409 PASD1Q8IV76 773 aa17.5■□□□□ 0.39
PDCD1-201ENST00000334409 RHOT1Q8IXI2 618 aa17.5■□□□□ 0.39
PDCD1-201ENST00000334409 CCDC110Q8TBZ0 833 aa17.5■□□□□ 0.39
PDCD1-201ENST00000334409 VCPIP1Q96JH7 1222 aa17.5■□□□□ 0.39
PDCD1-201ENST00000334409 ARL8BQ9NVJ2 186 aa17.5■□□□□ 0.39
PDCD1-201ENST00000334409 ZNF148Q9UQR1 794 aa17.5■□□□□ 0.39
PDCD1-201ENST00000334409 SNX9Q9Y5X1 595 aa17.5■□□□□ 0.39
PDCD1-201ENST00000334409 E2F6O75461 281 aa17.5■□□□□ 0.39
PDCD1-201ENST00000334409 TIMP1P01033 207 aa17.5■□□□□ 0.39
PDCD1-201ENST00000334409 CXCL10P02778 98 aa17.5■□□□□ 0.39
PDCD1-201ENST00000334409 HNRNPCP07910 306 aaKnown RBP eCLIP17.5■□□□□ 0.39
PDCD1-201ENST00000334409 ESRRAP11474 423 aaPredicted RBP17.5■□□□□ 0.39
PDCD1-201ENST00000334409 PGM1P36871 562 aa17.5■□□□□ 0.39
PDCD1-201ENST00000334409 MAGEA10P43363 369 aaPredicted RBP17.5■□□□□ 0.39
PDCD1-201ENST00000334409 CLCNKBP51801 687 aa17.5■□□□□ 0.39
PDCD1-201ENST00000334409 FAM189BP81408 668 aa17.5■□□□□ 0.39
PDCD1-201ENST00000334409 MED21Q13503 144 aa17.5■□□□□ 0.39
PDCD1-201ENST00000334409 LLGL1Q15334 1064 aa17.5■□□□□ 0.39
PDCD1-201ENST00000334409 PAN2Q504Q3 1202 aaKnown RBP17.5■□□□□ 0.39
PDCD1-201ENST00000334409 PPP1R2P3Q6NXS1 205 aa17.5■□□□□ 0.39
PDCD1-201ENST00000334409 TMCO2Q7Z6W1 182 aaPredicted RBP17.5■□□□□ 0.39
PDCD1-201ENST00000334409 UBE2Q1Q7Z7E8 422 aa17.5■□□□□ 0.39
PDCD1-201ENST00000334409 KATNAL2Q8IYT4 538 aa17.5■□□□□ 0.39
PDCD1-201ENST00000334409 GADD45GIP1Q8TAE8 222 aaPredicted RBP17.5■□□□□ 0.39
PDCD1-201ENST00000334409 CPA5Q8WXQ8 436 aa17.5■□□□□ 0.39
PDCD1-201ENST00000334409 ZNF75CPQ92670 426 aaPredicted RBP17.5■□□□□ 0.39
PDCD1-201ENST00000334409 TRIM55Q9BYV6 548 aa17.5■□□□□ 0.39
PDCD1-201ENST00000334409 PIRO00625 290 aa17.49■□□□□ 0.39
PDCD1-201ENST00000334409 NDC80O14777 642 aa17.49■□□□□ 0.39
PDCD1-201ENST00000334409 TGDSO95455 350 aa17.49■□□□□ 0.39
PDCD1-201ENST00000334409 ETS2P15036 469 aa17.49■□□□□ 0.39
PDCD1-201ENST00000334409 ADARP55265 1226 aaKnown RBP17.49■□□□□ 0.39
PDCD1-201ENST00000334409 MPP3Q13368 585 aa17.49■□□□□ 0.39
PDCD1-201ENST00000334409 PHACTR1Q9C0D0 580 aa17.49■□□□□ 0.39
PDCD1-201ENST00000334409 MRPL47Q9HD33 250 aaKnown RBP17.49■□□□□ 0.39
PDCD1-201ENST00000334409 NPHS2Q9NP85 383 aa17.49■□□□□ 0.39
PDCD1-201ENST00000334409 CISHQ9NSE2 258 aa17.49■□□□□ 0.39
PDCD1-201ENST00000334409 TAS2R1Q9NYW7 299 aa17.49■□□□□ 0.39
PDCD1-201ENST00000334409 R3HDM2Q9Y2K5 976 aaKnown RBP17.49■□□□□ 0.39
PDCD1-201ENST00000334409 PCDHB7Q9Y5E2 793 aa17.49■□□□□ 0.39
PDCD1-201ENST00000334409 WASF2Q9Y6W5 498 aa17.49■□□□□ 0.39
PDCD1-201ENST00000334409 F8W810 466 aa17.48■□□□□ 0.39
PDCD1-201ENST00000334409 B4GALT3O60512 393 aa17.48■□□□□ 0.39
PDCD1-201ENST00000334409 SPATA31D3P0C874 917 aa17.48■□□□□ 0.39
PDCD1-201ENST00000334409 RALAP11233 206 aa17.48■□□□□ 0.39
PDCD1-201ENST00000334409 TBXAS1P24557 533 aaPredicted RBP17.48■□□□□ 0.39
PDCD1-201ENST00000334409 CD97P48960 835 aa17.48■□□□□ 0.39
PDCD1-201ENST00000334409 SPATA31D4Q6ZUB0 917 aa17.48■□□□□ 0.39
PDCD1-201ENST00000334409 ZNF280BQ86YH2 543 aa17.48■□□□□ 0.39
PDCD1-201ENST00000334409 TMPRSS6Q8IU80 811 aa17.48■□□□□ 0.39
PDCD1-201ENST00000334409 HASPINQ8TF76 798 aa17.48■□□□□ 0.39
PDCD1-201ENST00000334409 SKA1Q96BD8 255 aa17.48■□□□□ 0.39
PDCD1-201ENST00000334409 HCSTQ9UBK5 93 aa17.48■□□□□ 0.39
PDCD1-201ENST00000334409 HMGXB4Q9UGU5 601 aa17.48■□□□□ 0.39
PDCD1-201ENST00000334409 CFAP69A5D8W1 941 aa17.48■□□□□ 0.39
PDCD1-201ENST00000334409 XPOTO43592 962 aaKnown RBP17.48■□□□□ 0.39
PDCD1-201ENST00000334409 RNASEH1O60930 286 aaKnown RBP17.48■□□□□ 0.39
PDCD1-201ENST00000334409 EOMESO95936 686 aa17.48■□□□□ 0.39
PDCD1-201ENST00000334409 ATICP31939 592 aa17.48■□□□□ 0.39
PDCD1-201ENST00000334409 CDK16Q00536 496 aa17.48■□□□□ 0.39
PDCD1-201ENST00000334409 DCTN2Q13561 401 aaKnown RBP17.48■□□□□ 0.39
PDCD1-201ENST00000334409 TRIP13Q15645 432 aaPredicted RBP17.48■□□□□ 0.39
PDCD1-201ENST00000334409 GLB1LQ6UWU2 654 aa17.48■□□□□ 0.39
PDCD1-201ENST00000334409 MAP7D3Q8IWC1 876 aa17.48■□□□□ 0.39
PDCD1-201ENST00000334409 EXD1Q8NHP7 514 aa17.48■□□□□ 0.39
PDCD1-201ENST00000334409 SPOCK2Q92563 424 aa17.48■□□□□ 0.39
PDCD1-201ENST00000334409 APBB2Q92870 758 aa17.48■□□□□ 0.39
PDCD1-201ENST00000334409 LRFN2Q9ULH4 789 aa17.48■□□□□ 0.39
PDCD1-201ENST00000334409 TDRD15B5MCY1 1934 aaKnown RBP17.47■□□□□ 0.39
PDCD1-201ENST00000334409 EXOC1LA0A1B0GW35 172 aa17.47■□□□□ 0.39
PDCD1-201ENST00000334409 HCRTO43612 131 aa17.47■□□□□ 0.39
PDCD1-201ENST00000334409 CA4P22748 312 aa17.47■□□□□ 0.39
PDCD1-201ENST00000334409 ACTR3P61158 418 aa17.47■□□□□ 0.39
PDCD1-201ENST00000334409 CCDC92Q53HC0 331 aaPredicted RBP17.47■□□□□ 0.39
PDCD1-201ENST00000334409 PDSS2Q86YH6 399 aa17.47■□□□□ 0.39
PDCD1-201ENST00000334409 PHF13Q86YI8 300 aaPredicted RBP17.47■□□□□ 0.39
PDCD1-201ENST00000334409 C3orf58Q8NDZ4 430 aa17.47■□□□□ 0.39
PDCD1-201ENST00000334409 OR6Y1Q8NGX8 325 aa17.47■□□□□ 0.39
PDCD1-201ENST00000334409 HEY2Q9UBP5 337 aa17.47■□□□□ 0.39
PDCD1-201ENST00000334409 SCINQ9Y6U3 715 aa17.47■□□□□ 0.39
PDCD1-201ENST00000334409 FOXO6A8MYZ6 492 aa17.47■□□□□ 0.39
PDCD1-201ENST00000334409 KIAA0355O15063 1070 aa17.47■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms