RNA–Protein interactions for RNA: ENST00000333254.3

CCDC172-201, Transcript of coiled-coil domain containing 172, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCDC172, Length 1,699 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC172-201ENST00000333254 CRLF3Q8IUI8 442 aa11.07□□□□□ -0.64
CCDC172-201ENST00000333254 NUDCD3Q8IVD9 361 aa11.07□□□□□ -0.64
CCDC172-201ENST00000333254 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP11.07□□□□□ -0.64
CCDC172-201ENST00000333254 DEPDC1BQ8WUY9 529 aa11.07□□□□□ -0.64
CCDC172-201ENST00000333254 BRI3BPQ8WY22 251 aa11.07□□□□□ -0.64
CCDC172-201ENST00000333254 WNT8BQ93098 351 aa11.07□□□□□ -0.64
CCDC172-201ENST00000333254 FAM49AQ9H0Q0 323 aaPredicted RBP11.07□□□□□ -0.64
CCDC172-201ENST00000333254 C12orf65Q9H3J6 166 aaKnown RBP11.07□□□□□ -0.64
CCDC172-201ENST00000333254 CDHR5Q9HBB8 845 aa11.07□□□□□ -0.64
CCDC172-201ENST00000333254 THAP1Q9NVV9 213 aa11.07□□□□□ -0.64
CCDC172-201ENST00000333254 DCDC2Q9UHG0 476 aa11.07□□□□□ -0.64
CCDC172-201ENST00000333254 LRRC42Q9Y546 428 aa11.07□□□□□ -0.64
CCDC172-201ENST00000333254 NUMBLQ9Y6R0 609 aa11.07□□□□□ -0.64
CCDC172-201ENST00000333254 IQCA1LA6NCM1 817 aa11.06□□□□□ -0.64
CCDC172-201ENST00000333254 CAPN14A8MX76 684 aa11.06□□□□□ -0.64
CCDC172-201ENST00000333254 RNF103O00237 685 aa11.06□□□□□ -0.64
CCDC172-201ENST00000333254 FCHO1O14526 889 aa11.06□□□□□ -0.64
CCDC172-201ENST00000333254 DCLK1O15075 740 aa11.06□□□□□ -0.64
CCDC172-201ENST00000333254 GSC2O15499 205 aa11.06□□□□□ -0.64
CCDC172-201ENST00000333254 MFSD11O43934 449 aa11.06□□□□□ -0.64
CCDC172-201ENST00000333254 MAGEC1O60732 1142 aa11.06□□□□□ -0.64
CCDC172-201ENST00000333254 LUC7L3O95232 432 aaKnown RBP11.06□□□□□ -0.64
CCDC172-201ENST00000333254 RARBP10826 455 aa11.06□□□□□ -0.64
CCDC172-201ENST00000333254 MYL2P10916 166 aa11.06□□□□□ -0.64
CCDC172-201ENST00000333254 MYL4P12829 197 aa11.06□□□□□ -0.64
CCDC172-201ENST00000333254 DNAJB2P25686 324 aa11.06□□□□□ -0.64
CCDC172-201ENST00000333254 LMO2P25791 158 aa11.06□□□□□ -0.64
CCDC172-201ENST00000333254 TKTP29401 623 aaKnown RBP11.06□□□□□ -0.64
CCDC172-201ENST00000333254 MAGEA12P43365 314 aa11.06□□□□□ -0.64
CCDC172-201ENST00000333254 PSEN2P49810 448 aa11.06□□□□□ -0.64
CCDC172-201ENST00000333254 RAP1GDS1P52306 607 aa11.06□□□□□ -0.64
CCDC172-201ENST00000333254 LILRA4P59901 499 aa11.06□□□□□ -0.64
CCDC172-201ENST00000333254 TMPRSS15P98073 1019 aa11.06□□□□□ -0.64
CCDC172-201ENST00000333254 ZBTB16Q05516 673 aa11.06□□□□□ -0.64
CCDC172-201ENST00000333254 ZNF33AQ06730 810 aa11.06□□□□□ -0.64
CCDC172-201ENST00000333254 OVGP1Q12889 678 aa11.06□□□□□ -0.64
CCDC172-201ENST00000333254 MTM1Q13496 603 aa11.06□□□□□ -0.64
CCDC172-201ENST00000333254 MFSD10Q14728 455 aa11.06□□□□□ -0.64
CCDC172-201ENST00000333254 CRYMQ14894 314 aa11.06□□□□□ -0.64
CCDC172-201ENST00000333254 GLRA4Q5JXX5 417 aa11.06□□□□□ -0.64
CCDC172-201ENST00000333254 PACS1Q6VY07 963 aa11.06□□□□□ -0.64
CCDC172-201ENST00000333254 OSTM1Q86WC4 334 aa11.06□□□□□ -0.64
CCDC172-201ENST00000333254 KLHDC8BQ8IXV7 354 aa11.06□□□□□ -0.64
CCDC172-201ENST00000333254 NDUFAF2Q8N183 169 aa11.06□□□□□ -0.64
CCDC172-201ENST00000333254 TMEM86AQ8N2M4 240 aa11.06□□□□□ -0.64
CCDC172-201ENST00000333254 COLGALT1Q8NBJ5 622 aa11.06□□□□□ -0.64
CCDC172-201ENST00000333254 ARMC2Q8NEN0 867 aa11.06□□□□□ -0.64
CCDC172-201ENST00000333254 ARNTL2Q8WYA1 636 aa11.06□□□□□ -0.64
CCDC172-201ENST00000333254 ATP2A3Q93084 1043 aa11.06□□□□□ -0.64
CCDC172-201ENST00000333254 PPP1R10Q96QC0 940 aaKnown RBP11.06□□□□□ -0.64
CCDC172-201ENST00000333254 MIPEPQ99797 713 aa11.06□□□□□ -0.64
CCDC172-201ENST00000333254 KATNAL1Q9BW62 490 aa11.06□□□□□ -0.64
CCDC172-201ENST00000333254 CADM1Q9BY67 442 aaKnown RBP11.06□□□□□ -0.64
CCDC172-201ENST00000333254 SLC38A7Q9NVC3 462 aa11.06□□□□□ -0.64
CCDC172-201ENST00000333254 ARL8BQ9NVJ2 186 aa11.06□□□□□ -0.64
CCDC172-201ENST00000333254 PIN4Q9Y237 131 aaKnown RBP11.06□□□□□ -0.64
CCDC172-201ENST00000333254 MAD1L1Q9Y6D9 718 aa11.06□□□□□ -0.64
CCDC172-201ENST00000333254 DOCK3Q8IZD9 2030 aa11.06□□□□□ -0.64
CCDC172-201ENST00000333254 AP3B1O00203 1094 aa11.05□□□□□ -0.64
CCDC172-201ENST00000333254 HGSO14964 777 aaPredicted RBP11.05□□□□□ -0.64
CCDC172-201ENST00000333254 ADCY6O43306 1168 aa11.05□□□□□ -0.64
CCDC172-201ENST00000333254 DIAPH2O60879 1101 aa11.05□□□□□ -0.64
CCDC172-201ENST00000333254 PTPN1P18031 435 aaKnown RBP11.05□□□□□ -0.64
CCDC172-201ENST00000333254 ATXN1P54253 815 aaKnown RBP11.05□□□□□ -0.64
CCDC172-201ENST00000333254 SOX4Q06945 474 aaPredicted RBP11.05□□□□□ -0.64
CCDC172-201ENST00000333254 ADIGQ0VDE8 80 aa11.05□□□□□ -0.64
CCDC172-201ENST00000333254 MORN1Q5T089 497 aa11.05□□□□□ -0.64
CCDC172-201ENST00000333254 SCML4Q8N228 414 aa11.05□□□□□ -0.64
CCDC172-201ENST00000333254 MPP5Q8N3R9 675 aa11.05□□□□□ -0.64
CCDC172-201ENST00000333254 NPLOC4Q8TAT6 608 aa11.05□□□□□ -0.64
CCDC172-201ENST00000333254 N4BP2L2Q92802 583 aaPredicted RBP11.05□□□□□ -0.64
CCDC172-201ENST00000333254 P2RY11Q96G91 374 aa11.05□□□□□ -0.64
CCDC172-201ENST00000333254 NUDCD1Q96RS6 583 aa11.05□□□□□ -0.64
CCDC172-201ENST00000333254 VAT1Q99536 393 aa11.05□□□□□ -0.64
CCDC172-201ENST00000333254 CPNE1Q99829 537 aa11.05□□□□□ -0.64
CCDC172-201ENST00000333254 C1orf21Q9H246 121 aa11.05□□□□□ -0.64
CCDC172-201ENST00000333254 CXorf56Q9H5V9 222 aa11.05□□□□□ -0.64
CCDC172-201ENST00000333254 DENND2DQ9H6A0 471 aaPredicted RBP11.05□□□□□ -0.64
CCDC172-201ENST00000333254 LRRC4Q9HBW1 653 aa11.05□□□□□ -0.64
CCDC172-201ENST00000333254 SPON1Q9HCB6 807 aa11.05□□□□□ -0.64
CCDC172-201ENST00000333254 CNGB3Q9NQW8 809 aa11.05□□□□□ -0.64
CCDC172-201ENST00000333254 HBS1LQ9Y450 684 aaKnown RBP11.05□□□□□ -0.64
CCDC172-201ENST00000333254 HES2Q9Y543 173 aa11.05□□□□□ -0.64
CCDC172-201ENST00000333254 IPPQ9Y573 584 aa11.05□□□□□ -0.64
CCDC172-201ENST00000333254 PTCH2Q9Y6C5 1203 aa11.05□□□□□ -0.64
CCDC172-201ENST00000333254 GOLGB1Q14789 3259 aaKnown RBP11.05□□□□□ -0.64
CCDC172-201ENST00000333254 SCN10AQ9Y5Y9 1956 aa11.05□□□□□ -0.64
CCDC172-201ENST00000333254 F8W8V4 182 aa11.04□□□□□ -0.64
CCDC172-201ENST00000333254 UGT1A9O60656 530 aa11.04□□□□□ -0.64
CCDC172-201ENST00000333254 GSRP00390 522 aa11.04□□□□□ -0.64
CCDC172-201ENST00000333254 POLBP06746 335 aa11.04□□□□□ -0.64
CCDC172-201ENST00000333254 SERPINA6P08185 405 aa11.04□□□□□ -0.64
CCDC172-201ENST00000333254 PDGFRBP09619 1106 aa11.04□□□□□ -0.64
CCDC172-201ENST00000333254 ESRRAP11474 423 aaPredicted RBP11.04□□□□□ -0.64
CCDC172-201ENST00000333254 GNAT1P11488 350 aa11.04□□□□□ -0.64
CCDC172-201ENST00000333254 ALOX15P16050 662 aaPredicted RBP11.04□□□□□ -0.64
CCDC172-201ENST00000333254 GM2AP17900 193 aa11.04□□□□□ -0.64
CCDC172-201ENST00000333254 PAX3P23760 479 aa11.04□□□□□ -0.64
CCDC172-201ENST00000333254 GRK2P25098 689 aa11.04□□□□□ -0.64
CCDC172-201ENST00000333254 GARSP41250 739 aaKnown RBP11.04□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 48.4 ms