RNA–Protein interactions for RNA: ENST00000331450.9

LRRC28-202, Transcript of leucine rich repeat containing 28, humanhuman

TSL 1 (best) BASIC

Gene LRRC28, Length 752 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28-202ENST00000331450 MAN1A1P33908 653 aa16.62■□□□□ 0.25
LRRC28-202ENST00000331450 ADRA1BP35368 520 aa16.62■□□□□ 0.25
LRRC28-202ENST00000331450 PCK1P35558 622 aa16.62■□□□□ 0.25
LRRC28-202ENST00000331450 AIF1P55008 147 aa16.62■□□□□ 0.25
LRRC28-202ENST00000331450 ZXDAP98168 799 aa16.62■□□□□ 0.25
LRRC28-202ENST00000331450 DAB2IPQ5VWQ8 1189 aa16.62■□□□□ 0.25
LRRC28-202ENST00000331450 RNF43Q68DV7 783 aa16.62■□□□□ 0.25
LRRC28-202ENST00000331450 KIAA1328Q86T90 577 aa16.62■□□□□ 0.25
LRRC28-202ENST00000331450 TMEM25Q86YD3 366 aa16.62■□□□□ 0.25
LRRC28-202ENST00000331450 CSGALNACT1Q8TDX6 532 aa16.62■□□□□ 0.25
LRRC28-202ENST00000331450 MYEOVQ96EZ4 313 aa16.62■□□□□ 0.25
LRRC28-202ENST00000331450 HAPLN3Q96S86 360 aa16.62■□□□□ 0.25
LRRC28-202ENST00000331450 PEBP4Q96S96 227 aa16.62■□□□□ 0.25
LRRC28-202ENST00000331450 NCAPGQ9BPX3 1015 aa16.62■□□□□ 0.25
LRRC28-202ENST00000331450 HEBP1Q9NRV9 189 aa16.62■□□□□ 0.25
LRRC28-202ENST00000331450 WNT16Q9UBV4 365 aa16.62■□□□□ 0.25
LRRC28-202ENST00000331450 SLC12A6Q9UHW9 1150 aa16.62■□□□□ 0.25
LRRC28-202ENST00000331450 HS3ST4Q9Y661 456 aa16.62■□□□□ 0.25
LRRC28-202ENST00000331450 DCXO43602 365 aa16.61■□□□□ 0.25
LRRC28-202ENST00000331450 ADH1CP00326 375 aa16.61■□□□□ 0.25
LRRC28-202ENST00000331450 PENKP01210 267 aaPredicted RBP16.61■□□□□ 0.25
LRRC28-202ENST00000331450 ADH5P11766 374 aa16.61■□□□□ 0.25
LRRC28-202ENST00000331450 TCF4P15884 667 aa16.61■□□□□ 0.25
LRRC28-202ENST00000331450 TACR2P21452 398 aa16.61■□□□□ 0.25
LRRC28-202ENST00000331450 MIPP30301 263 aa16.61■□□□□ 0.25
LRRC28-202ENST00000331450 CTHP32929 405 aa16.61■□□□□ 0.25
LRRC28-202ENST00000331450 GJA4P35212 333 aa16.61■□□□□ 0.25
LRRC28-202ENST00000331450 ARHGAP25P42331 645 aa16.61■□□□□ 0.25
LRRC28-202ENST00000331450 SGSHP51688 502 aa16.61■□□□□ 0.25
LRRC28-202ENST00000331450 FYB2Q5VWT5 728 aa16.61■□□□□ 0.25
LRRC28-202ENST00000331450 RAP1GAP2Q684P5 730 aa16.61■□□□□ 0.25
LRRC28-202ENST00000331450 RFWD3Q6PCD5 774 aa16.61■□□□□ 0.25
LRRC28-202ENST00000331450 CHSY1Q86X52 802 aa16.61■□□□□ 0.25
LRRC28-202ENST00000331450 CPNE8Q86YQ8 564 aa16.61■□□□□ 0.25
LRRC28-202ENST00000331450 ZNF683Q8IZ20 524 aa16.61■□□□□ 0.25
LRRC28-202ENST00000331450 TXLNBQ8N3L3 684 aa16.61■□□□□ 0.25
LRRC28-202ENST00000331450 C1orf74Q96LT6 269 aa16.61■□□□□ 0.25
LRRC28-202ENST00000331450 DDX50Q9BQ39 737 aaKnown RBP16.61■□□□□ 0.25
LRRC28-202ENST00000331450 FZD10Q9ULW2 581 aa16.61■□□□□ 0.25
LRRC28-202ENST00000331450 DUSP10Q9Y6W6 482 aa16.61■□□□□ 0.25
LRRC28-202ENST00000331450 CACNG3O60359 315 aa16.6■□□□□ 0.25
LRRC28-202ENST00000331450 CCDC175P0C221 793 aa16.6■□□□□ 0.25
LRRC28-202ENST00000331450 GLULP15104 373 aa16.6■□□□□ 0.25
LRRC28-202ENST00000331450 IL1R2P27930 398 aa16.6■□□□□ 0.25
LRRC28-202ENST00000331450 GGCXP38435 758 aa16.6■□□□□ 0.25
LRRC28-202ENST00000331450 SOX9P48436 509 aa16.6■□□□□ 0.25
LRRC28-202ENST00000331450 NRG1Q02297 640 aaPredicted RBP16.6■□□□□ 0.25
LRRC28-202ENST00000331450 SLC25A11Q02978 314 aaKnown RBP16.6■□□□□ 0.25
LRRC28-202ENST00000331450 GAD2Q05329 585 aa16.6■□□□□ 0.25
LRRC28-202ENST00000331450 NR1H3Q13133 447 aa16.6■□□□□ 0.25
LRRC28-202ENST00000331450 MLF2Q15773 248 aaPredicted RBP16.6■□□□□ 0.25
LRRC28-202ENST00000331450 ARL13BQ3SXY8 428 aa16.6■□□□□ 0.25
LRRC28-202ENST00000331450 C5orf22Q49AR2 442 aa16.6■□□□□ 0.25
LRRC28-202ENST00000331450 MPP7Q5T2T1 576 aa16.6■□□□□ 0.25
LRRC28-202ENST00000331450 ACBD5Q5T8D3 534 aaPredicted RBP16.6■□□□□ 0.25
LRRC28-202ENST00000331450 MANEALQ5VSG8 457 aa16.6■□□□□ 0.25
LRRC28-202ENST00000331450 ZNF662Q6ZS27 426 aa16.6■□□□□ 0.25
LRRC28-202ENST00000331450 TPGS1Q6ZTW0 290 aa16.6■□□□□ 0.25
LRRC28-202ENST00000331450 SLFN11Q7Z7L1 901 aa16.6■□□□□ 0.25
LRRC28-202ENST00000331450 ETFBKMTQ8IXQ9 262 aa16.6■□□□□ 0.25
LRRC28-202ENST00000331450 TTC8Q8TAM2 541 aa16.6■□□□□ 0.25
LRRC28-202ENST00000331450 EDAQ92838 391 aa16.6■□□□□ 0.25
LRRC28-202ENST00000331450 MSANTD3Q96H12 275 aa16.6■□□□□ 0.25
LRRC28-202ENST00000331450 SNRNP25Q9BV90 132 aaKnown RBP16.6■□□□□ 0.25
LRRC28-202ENST00000331450 COL25A1Q9BXS0 654 aaPredicted RBP16.6■□□□□ 0.25
LRRC28-202ENST00000331450 OSBPL2Q9H1P3 480 aa16.6■□□□□ 0.25
LRRC28-202ENST00000331450 C8orf33Q9H7E9 229 aaPredicted RBP16.6■□□□□ 0.25
LRRC28-202ENST00000331450 ARHGEF3Q9NR81 526 aa16.6■□□□□ 0.25
LRRC28-202ENST00000331450 TRIM10Q9UDY6 481 aa16.6■□□□□ 0.25
LRRC28-202ENST00000331450 USP18Q9UMW8 372 aa16.6■□□□□ 0.25
LRRC28-202ENST00000331450 NEU3Q9UQ49 428 aa16.6■□□□□ 0.25
LRRC28-202ENST00000331450 PIAS3Q9Y6X2 628 aa16.6■□□□□ 0.25
LRRC28-202ENST00000331450 CHD5Q8TDI0 1954 aa16.6■□□□□ 0.25
LRRC28-202ENST00000331450 MUC22E2RYF6 1773 aaPredicted RBP16.59■□□□□ 0.25
LRRC28-202ENST00000331450 IGLV3-10A0A075B6K4 115 aa16.59■□□□□ 0.25
LRRC28-202ENST00000331450 KRBA1A5PL33 1030 aa16.59■□□□□ 0.25
LRRC28-202ENST00000331450 F5H5T6 163 aa16.59■□□□□ 0.25
LRRC28-202ENST00000331450 SPECC1L-ADORA2AF8WAN1 911 aa16.59■□□□□ 0.25
LRRC28-202ENST00000331450 TRDMT1O14717 391 aaKnown RBP16.59■□□□□ 0.25
LRRC28-202ENST00000331450 PRPSAP2O60256 369 aa16.59■□□□□ 0.25
LRRC28-202ENST00000331450 BUB1BO60566 1050 aaPredicted RBP16.59■□□□□ 0.25
LRRC28-202ENST00000331450 HOXD9P28356 352 aaPredicted RBP16.59■□□□□ 0.25
LRRC28-202ENST00000331450 OPRD1P41143 372 aa16.59■□□□□ 0.25
LRRC28-202ENST00000331450 SIGLEC14Q08ET2 396 aa16.59■□□□□ 0.25
LRRC28-202ENST00000331450 KIF5AQ12840 1032 aa16.59■□□□□ 0.25
LRRC28-202ENST00000331450 SEMA3BQ13214 749 aa16.59■□□□□ 0.25
LRRC28-202ENST00000331450 AUHQ13825 339 aaKnown RBP16.59■□□□□ 0.25
LRRC28-202ENST00000331450 MESDQ14696 234 aa16.59■□□□□ 0.25
LRRC28-202ENST00000331450 MPPE1Q53F39 396 aa16.59■□□□□ 0.25
LRRC28-202ENST00000331450 SLC44A4Q53GD3 710 aa16.59■□□□□ 0.25
LRRC28-202ENST00000331450 C11orf63Q6NUN7 778 aa16.59■□□□□ 0.25
LRRC28-202ENST00000331450 FBXL22Q6P050 247 aa16.59■□□□□ 0.25
LRRC28-202ENST00000331450 SCYL2Q6P3W7 929 aa16.59■□□□□ 0.25
LRRC28-202ENST00000331450 C14orf80Q86SX3 495 aa16.59■□□□□ 0.25
LRRC28-202ENST00000331450 C12orf40Q86WS4 652 aa16.59■□□□□ 0.25
LRRC28-202ENST00000331450 RALGPS2Q86X27 583 aaPredicted RBP16.59■□□□□ 0.25
LRRC28-202ENST00000331450 LGI2Q8N0V4 545 aa16.59■□□□□ 0.25
LRRC28-202ENST00000331450 HJURPQ8NCD3 748 aaPredicted RBP16.59■□□□□ 0.25
LRRC28-202ENST00000331450 TPCN2Q8NHX9 752 aa16.59■□□□□ 0.25
LRRC28-202ENST00000331450 CALR3Q96L12 384 aaKnown RBP16.59■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 49.6 ms