RNA–Protein interactions for RNA: ENST00000330137.11

SKA2-201, Transcript of spindle and kinetochore associated complex subunit 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SKA2, Length 2,798 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA2-201ENST00000330137 CPQQ9Y646 472 aa8.61□□□□□ -1.03
SKA2-201ENST00000330137 RNF103O00237 685 aa8.61□□□□□ -1.03
SKA2-201ENST00000330137 TLR3O15455 904 aaKnown RBP8.61□□□□□ -1.03
SKA2-201ENST00000330137 DGKIO75912 1065 aa8.61□□□□□ -1.03
SKA2-201ENST00000330137 DNAJB5O75953 348 aa8.61□□□□□ -1.03
SKA2-201ENST00000330137 CLPXO76031 633 aa8.61□□□□□ -1.03
SKA2-201ENST00000330137 ATE1O95260 518 aa8.61□□□□□ -1.03
SKA2-201ENST00000330137 RALBP11234 206 aa8.61□□□□□ -1.03
SKA2-201ENST00000330137 FGF3P11487 239 aaPredicted RBP8.61□□□□□ -1.03
SKA2-201ENST00000330137 ETS1P14921 441 aa8.61□□□□□ -1.03
SKA2-201ENST00000330137 GLDCP23378 1020 aa8.61□□□□□ -1.03
SKA2-201ENST00000330137 RPL22P35268 128 aaKnown RBP8.61□□□□□ -1.03
SKA2-201ENST00000330137 ERFP50548 548 aa8.61□□□□□ -1.03
SKA2-201ENST00000330137 MRPS22P82650 360 aaKnown RBP8.61□□□□□ -1.03
SKA2-201ENST00000330137 CYP4A11Q02928 519 aa8.61□□□□□ -1.03
SKA2-201ENST00000330137 ACAP1Q15027 740 aa8.61□□□□□ -1.03
SKA2-201ENST00000330137 PDK1Q15118 436 aa8.61□□□□□ -1.03
SKA2-201ENST00000330137 CEP55Q53EZ4 464 aa8.61□□□□□ -1.03
SKA2-201ENST00000330137 FASTKD1Q53R41 847 aaKnown RBP8.61□□□□□ -1.03
SKA2-201ENST00000330137 NHSL2Q5HYW2 709 aa8.61□□□□□ -1.03
SKA2-201ENST00000330137 INTS11Q5TA45 600 aaKnown RBP8.61□□□□□ -1.03
SKA2-201ENST00000330137 PAOXQ6QHF9 649 aa8.61□□□□□ -1.03
SKA2-201ENST00000330137 CNTD1Q8N815 330 aa8.61□□□□□ -1.03
SKA2-201ENST00000330137 HIPK4Q8NE63 616 aa8.61□□□□□ -1.03
SKA2-201ENST00000330137 SHKBP1Q8TBC3 707 aa8.61□□□□□ -1.03
SKA2-201ENST00000330137 KAT5Q92993 513 aa8.61□□□□□ -1.03
SKA2-201ENST00000330137 ZNF778Q96MU6 729 aa8.61□□□□□ -1.03
SKA2-201ENST00000330137 BCL7BQ9BQE9 202 aa8.61□□□□□ -1.03
SKA2-201ENST00000330137 MECRQ9BV79 373 aa8.61□□□□□ -1.03
SKA2-201ENST00000330137 APOL6Q9BWW8 343 aa8.61□□□□□ -1.03
SKA2-201ENST00000330137 ADAMTS10Q9H324 1103 aa8.61□□□□□ -1.03
SKA2-201ENST00000330137 HOMER2Q9NSB8 354 aa8.61□□□□□ -1.03
SKA2-201ENST00000330137 HSPBP1Q9NZL4 362 aa8.61□□□□□ -1.03
SKA2-201ENST00000330137 SATB2Q9UPW6 733 aa8.61□□□□□ -1.03
SKA2-201ENST00000330137 FOCADQ5VW36 1801 aa8.61□□□□□ -1.03
SKA2-201ENST00000330137 C7orf72A4D263 438 aa8.61□□□□□ -1.03
SKA2-201ENST00000330137 KBTBD13C9JR72 458 aa8.61□□□□□ -1.03
SKA2-201ENST00000330137 XPO1O14980 1071 aaKnown RBP8.61□□□□□ -1.03
SKA2-201ENST00000330137 LDHAP00338 332 aaKnown RBP8.61□□□□□ -1.03
SKA2-201ENST00000330137 TFPTP0C1Z6 253 aa8.61□□□□□ -1.03
SKA2-201ENST00000330137 BMP2P12643 396 aa8.61□□□□□ -1.03
SKA2-201ENST00000330137 CCNA2P20248 432 aa8.61□□□□□ -1.03
SKA2-201ENST00000330137 GABRB3P28472 473 aa8.61□□□□□ -1.03
SKA2-201ENST00000330137 HSD17B4P51659 736 aa8.61□□□□□ -1.03
SKA2-201ENST00000330137 PSMC1P62191 440 aaKnown RBP8.61□□□□□ -1.03
SKA2-201ENST00000330137 RHDQ02161 417 aa8.61□□□□□ -1.03
SKA2-201ENST00000330137 LLGL1Q15334 1064 aa8.61□□□□□ -1.03
SKA2-201ENST00000330137 PRR16Q569H4 304 aa8.61□□□□□ -1.03
SKA2-201ENST00000330137 ANKRD22Q5VYY1 191 aa8.61□□□□□ -1.03
SKA2-201ENST00000330137 FAM117BQ6P1L5 589 aa8.61□□□□□ -1.03
SKA2-201ENST00000330137 DSELQ8IZU8 1212 aa8.61□□□□□ -1.03
SKA2-201ENST00000330137 CALML6Q8TD86 181 aa8.61□□□□□ -1.03
SKA2-201ENST00000330137 RAB2BQ8WUD1 216 aa8.61□□□□□ -1.03
SKA2-201ENST00000330137 SLC7A3Q8WY07 619 aa8.61□□□□□ -1.03
SKA2-201ENST00000330137 TMEM121Q9BTD3 319 aa8.61□□□□□ -1.03
SKA2-201ENST00000330137 SLC13A1Q9BZW2 595 aa8.61□□□□□ -1.03
SKA2-201ENST00000330137 EHD1Q9H4M9 534 aa8.61□□□□□ -1.03
SKA2-201ENST00000330137 HMG20AQ9NP66 347 aa8.61□□□□□ -1.03
SKA2-201ENST00000330137 CRNNQ9UBG3 495 aaPredicted RBP8.61□□□□□ -1.03
SKA2-201ENST00000330137 MTMR7Q9Y216 660 aa8.61□□□□□ -1.03
SKA2-201ENST00000330137 ZBTB1Q9Y2K1 713 aa8.61□□□□□ -1.03
SKA2-201ENST00000330137 TMEM191CA6NGB0 347 aa8.6□□□□□ -1.03
SKA2-201ENST00000330137 TRIM38O00635 465 aa8.6□□□□□ -1.03
SKA2-201ENST00000330137 MSH4O15457 936 aa8.6□□□□□ -1.03
SKA2-201ENST00000330137 DYNC1LI2O43237 492 aaPredicted RBP8.6□□□□□ -1.03
SKA2-201ENST00000330137 HTRA2O43464 458 aaPredicted RBP8.6□□□□□ -1.03
SKA2-201ENST00000330137 CPNE6O95741 557 aa8.6□□□□□ -1.03
SKA2-201ENST00000330137 GSRP00390 522 aa8.6□□□□□ -1.03
SKA2-201ENST00000330137 TMEM191BP0C7N4 346 aa8.6□□□□□ -1.03
SKA2-201ENST00000330137 ATF7P17544 494 aaPredicted RBP8.6□□□□□ -1.03
SKA2-201ENST00000330137 SLC7A1P30825 629 aa8.6□□□□□ -1.03
SKA2-201ENST00000330137 IREB2P48200 963 aaKnown RBP8.6□□□□□ -1.03
SKA2-201ENST00000330137 NME5P56597 212 aa8.6□□□□□ -1.03
SKA2-201ENST00000330137 GTF2BQ00403 316 aa8.6□□□□□ -1.03
SKA2-201ENST00000330137 NFATC3Q12968 1075 aa8.6□□□□□ -1.03
SKA2-201ENST00000330137 DPYSL3Q14195 570 aa8.6□□□□□ -1.03
SKA2-201ENST00000330137 KCNJ11Q14654 390 aa8.6□□□□□ -1.03
SKA2-201ENST00000330137 PPP2R5DQ14738 602 aa8.6□□□□□ -1.03
SKA2-201ENST00000330137 CCDC14Q49A88 953 aa8.6□□□□□ -1.03
SKA2-201ENST00000330137 OGFOD2Q6N063 350 aa8.6□□□□□ -1.03
SKA2-201ENST00000330137 KIAA1841Q6NSI8 718 aa8.6□□□□□ -1.03
SKA2-201ENST00000330137 C11orf74Q86VG3 221 aa8.6□□□□□ -1.03
SKA2-201ENST00000330137 UNC5BQ8IZJ1 945 aa8.6□□□□□ -1.03
SKA2-201ENST00000330137 BHLHE22Q8NFJ8 381 aaPredicted RBP8.6□□□□□ -1.03
SKA2-201ENST00000330137 ACDQ96AP0 544 aa8.6□□□□□ -1.03
SKA2-201ENST00000330137 MED30Q96HR3 178 aa8.6□□□□□ -1.03
SKA2-201ENST00000330137 ALPK1Q96QP1 1244 aa8.6□□□□□ -1.03
SKA2-201ENST00000330137 EFCAB1Q9HAE3 211 aa8.6□□□□□ -1.03
SKA2-201ENST00000330137 MARCOQ9UEW3 520 aaPredicted RBP8.6□□□□□ -1.03
SKA2-201ENST00000330137 GAKO14976 1311 aa8.6□□□□□ -1.03
SKA2-201ENST00000330137 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP8.6□□□□□ -1.03
SKA2-201ENST00000330137 FAM159BA6NKW6 160 aa8.6□□□□□ -1.03
SKA2-201ENST00000330137 CLDN25C9JDP6 229 aa8.6□□□□□ -1.03
SKA2-201ENST00000330137 MEIS2O14770 477 aa8.6□□□□□ -1.03
SKA2-201ENST00000330137 AKAP10O43572 662 aa8.6□□□□□ -1.03
SKA2-201ENST00000330137 NDUFB5O43674 189 aa8.6□□□□□ -1.03
SKA2-201ENST00000330137 KLHL41O60662 606 aa8.6□□□□□ -1.03
SKA2-201ENST00000330137 CAPN15O75808 1086 aa8.6□□□□□ -1.03
SKA2-201ENST00000330137 SORBS2O94875 1100 aaKnown RBP8.6□□□□□ -1.03
SKA2-201ENST00000330137 TMEM63AO94886 807 aa8.6□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms