RNA–Protein interactions for RNA: ENST00000328514.11

GINS3-202, Transcript of GINS complex subunit 3, humanhuman

TSL 1 (best) BASIC

Gene GINS3, Length 1,932 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GINS3-202ENST00000328514 Q6ZNX1 250 aa11.59□□□□□ -0.55
GINS3-202ENST00000328514 CHERPQ8IWX8 916 aaKnown RBP11.59□□□□□ -0.55
GINS3-202ENST00000328514 RSPH1Q8WYR4 309 aa11.59□□□□□ -0.55
GINS3-202ENST00000328514 TAAR1Q96RJ0 339 aa11.59□□□□□ -0.55
GINS3-202ENST00000328514 PRPF18Q99633 342 aaKnown RBP11.59□□□□□ -0.55
GINS3-202ENST00000328514 TMEM134Q9H6X4 195 aa11.59□□□□□ -0.55
GINS3-202ENST00000328514 COPG2Q9UBF2 871 aa11.59□□□□□ -0.55
GINS3-202ENST00000328514 RSL24D1Q9UHA3 163 aaKnown RBP11.59□□□□□ -0.55
GINS3-202ENST00000328514 PCSK1NQ9UHG2 260 aa11.59□□□□□ -0.55
GINS3-202ENST00000328514 ANKRD31Q8N7Z5 1873 aa11.59□□□□□ -0.55
GINS3-202ENST00000328514 LOC100653049A0A140TA62 436 aa11.58□□□□□ -0.55
GINS3-202ENST00000328514 SH3PXD2BA1X283 911 aa11.58□□□□□ -0.55
GINS3-202ENST00000328514 TMEM221A6NGB7 291 aa11.58□□□□□ -0.55
GINS3-202ENST00000328514 CCDC160A6NGH7 325 aa11.58□□□□□ -0.55
GINS3-202ENST00000328514 DCXO43602 365 aa11.58□□□□□ -0.55
GINS3-202ENST00000328514 KRT34O76011 436 aa11.58□□□□□ -0.55
GINS3-202ENST00000328514 TOP3BO95985 862 aaKnown RBP11.58□□□□□ -0.55
GINS3-202ENST00000328514 PSAPP07602 524 aa11.58□□□□□ -0.55
GINS3-202ENST00000328514 EIF2AK2P19525 551 aaKnown RBP11.58□□□□□ -0.55
GINS3-202ENST00000328514 ACADVLP49748 655 aa11.58□□□□□ -0.55
GINS3-202ENST00000328514 CDH6P55285 790 aa11.58□□□□□ -0.55
GINS3-202ENST00000328514 TUBA4AP68366 448 aa11.58□□□□□ -0.55
GINS3-202ENST00000328514 MMRN1Q13201 1228 aa11.58□□□□□ -0.55
GINS3-202ENST00000328514 SLC9A4Q6AI14 798 aa11.58□□□□□ -0.55
GINS3-202ENST00000328514 TSHZ1Q6ZSZ6 1077 aa11.58□□□□□ -0.55
GINS3-202ENST00000328514 TRMT1LQ7Z2T5 733 aaKnown RBP11.58□□□□□ -0.55
GINS3-202ENST00000328514 C10orf107Q8IVU9 208 aa11.58□□□□□ -0.55
GINS3-202ENST00000328514 LILRA2Q8N149 483 aa11.58□□□□□ -0.55
GINS3-202ENST00000328514 ZBTB8BQ8NAP8 495 aaPredicted RBP11.58□□□□□ -0.55
GINS3-202ENST00000328514 KYQ8NBH2 561 aa11.58□□□□□ -0.55
GINS3-202ENST00000328514 DEPDC1BQ8WUY9 529 aa11.58□□□□□ -0.55
GINS3-202ENST00000328514 HSPH1Q92598 858 aa11.58□□□□□ -0.55
GINS3-202ENST00000328514 ISL2Q96A47 359 aa11.58□□□□□ -0.55
GINS3-202ENST00000328514 ZBTB45Q96K62 511 aaPredicted RBP11.58□□□□□ -0.55
GINS3-202ENST00000328514 PEBP4Q96S96 227 aa11.58□□□□□ -0.55
GINS3-202ENST00000328514 CPXM1Q96SM3 734 aa11.58□□□□□ -0.55
GINS3-202ENST00000328514 PORCNQ9H237 461 aa11.58□□□□□ -0.55
GINS3-202ENST00000328514 DBNDD1Q9H9R9 158 aa11.58□□□□□ -0.55
GINS3-202ENST00000328514 IFT122Q9HBG6 1241 aa11.58□□□□□ -0.55
GINS3-202ENST00000328514 PCDH18Q9HCL0 1135 aa11.58□□□□□ -0.55
GINS3-202ENST00000328514 PXMP2Q9NR77 195 aa11.58□□□□□ -0.55
GINS3-202ENST00000328514 SCN9AQ15858 1988 aa11.58□□□□□ -0.56
GINS3-202ENST00000328514 RGSL1A5PLK6 1076 aa11.58□□□□□ -0.56
GINS3-202ENST00000328514 TMEM114B3SHH9 223 aa11.58□□□□□ -0.56
GINS3-202ENST00000328514 H3BSA7 217 aa11.58□□□□□ -0.56
GINS3-202ENST00000328514 K7ERI5 159 aa11.58□□□□□ -0.56
GINS3-202ENST00000328514 ZNF701M0R085 212 aaPredicted RBP11.58□□□□□ -0.56
GINS3-202ENST00000328514 TBC1D12O60347 775 aa11.58□□□□□ -0.56
GINS3-202ENST00000328514 BCAS2O75934 225 aaPredicted RBP11.58□□□□□ -0.56
GINS3-202ENST00000328514 ZBED1O96006 694 aa11.58□□□□□ -0.56
GINS3-202ENST00000328514 RALBP11234 206 aa11.58□□□□□ -0.56
GINS3-202ENST00000328514 MLNP12872 115 aa11.58□□□□□ -0.56
GINS3-202ENST00000328514 ATP6V1B1P15313 513 aa11.58□□□□□ -0.56
GINS3-202ENST00000328514 NCF2P19878 526 aaPredicted RBP11.58□□□□□ -0.56
GINS3-202ENST00000328514 IL4RP24394 825 aa11.58□□□□□ -0.56
GINS3-202ENST00000328514 ALDH1B1P30837 517 aa11.58□□□□□ -0.56
GINS3-202ENST00000328514 ARL2P36404 184 aa11.58□□□□□ -0.56
GINS3-202ENST00000328514 ASPAP45381 313 aa11.58□□□□□ -0.56
GINS3-202ENST00000328514 GALK1P51570 392 aa11.58□□□□□ -0.56
GINS3-202ENST00000328514 HK2P52789 917 aa11.58□□□□□ -0.56
GINS3-202ENST00000328514 MYL6P60660 151 aa11.58□□□□□ -0.56
GINS3-202ENST00000328514 RPS6P62753 249 aaKnown RBP11.58□□□□□ -0.56
GINS3-202ENST00000328514 FLOT2Q14254 428 aa11.58□□□□□ -0.56
GINS3-202ENST00000328514 RFTN1Q14699 578 aaPredicted RBP11.58□□□□□ -0.56
GINS3-202ENST00000328514 EMC2Q15006 297 aa11.58□□□□□ -0.56
GINS3-202ENST00000328514 HERC3Q15034 1050 aa11.58□□□□□ -0.56
GINS3-202ENST00000328514 CCDC153Q494R4 210 aa11.58□□□□□ -0.56
GINS3-202ENST00000328514 SCARA3Q6AZY7 606 aa11.58□□□□□ -0.56
GINS3-202ENST00000328514 C16orf46Q6P387 395 aa11.58□□□□□ -0.56
GINS3-202ENST00000328514 SETD3Q86TU7 594 aaPredicted RBP11.58□□□□□ -0.56
GINS3-202ENST00000328514 CPSF7Q8N684 471 aaKnown RBP11.58□□□□□ -0.56
GINS3-202ENST00000328514 EMC1Q8N766 993 aa11.58□□□□□ -0.56
GINS3-202ENST00000328514 TMEM102Q8N9M5 508 aaPredicted RBP11.58□□□□□ -0.56
GINS3-202ENST00000328514 RP9Q8TA86 221 aaKnown RBP11.58□□□□□ -0.56
GINS3-202ENST00000328514 CNBD2Q96M20 576 aa11.58□□□□□ -0.56
GINS3-202ENST00000328514 CNPY3Q9BT09 278 aa11.58□□□□□ -0.56
GINS3-202ENST00000328514 CDH19Q9H159 772 aa11.58□□□□□ -0.56
GINS3-202ENST00000328514 STAU2Q9NUL3 570 aaKnown RBP eCLIP11.58□□□□□ -0.56
GINS3-202ENST00000328514 TJP2Q9UDY2 1190 aa11.58□□□□□ -0.56
GINS3-202ENST00000328514 APPL1Q9UKG1 709 aa11.58□□□□□ -0.56
GINS3-202ENST00000328514 ZBTB12Q9Y330 459 aaPredicted RBP11.58□□□□□ -0.56
GINS3-202ENST00000328514 KAT6AQ92794 2004 aa11.57□□□□□ -0.56
GINS3-202ENST00000328514 TPP1O14773 563 aa11.57□□□□□ -0.56
GINS3-202ENST00000328514 ERBB2P04626 1255 aa11.57□□□□□ -0.56
GINS3-202ENST00000328514 C8BP07358 591 aa11.57□□□□□ -0.56
GINS3-202ENST00000328514 HNRNPCP07910 306 aaKnown RBP eCLIP11.57□□□□□ -0.56
GINS3-202ENST00000328514 KCNA2P16389 499 aa11.57□□□□□ -0.56
GINS3-202ENST00000328514 ZNF26P17031 533 aaPredicted RBP11.57□□□□□ -0.56
GINS3-202ENST00000328514 MX2P20592 715 aa11.57□□□□□ -0.56
GINS3-202ENST00000328514 RBL1P28749 1068 aa11.57□□□□□ -0.56
GINS3-202ENST00000328514 MAGEA12P43365 314 aa11.57□□□□□ -0.56
GINS3-202ENST00000328514 PHEXP78562 749 aa11.57□□□□□ -0.56
GINS3-202ENST00000328514 CDKL1Q00532 357 aa11.57□□□□□ -0.56
GINS3-202ENST00000328514 PRKCEQ02156 737 aa11.57□□□□□ -0.56
GINS3-202ENST00000328514 SEMA5AQ13591 1074 aa11.57□□□□□ -0.56
GINS3-202ENST00000328514 DPYSQ14117 519 aa11.57□□□□□ -0.56
GINS3-202ENST00000328514 SPIDRQ14159 915 aa11.57□□□□□ -0.56
GINS3-202ENST00000328514 GK3PQ14409 553 aa11.57□□□□□ -0.56
GINS3-202ENST00000328514 SURF1Q15526 300 aa11.57□□□□□ -0.56
GINS3-202ENST00000328514 XKR3Q5GH77 459 aa11.57□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms