RNA–Protein interactions for RNA: ENST00000325110.10

HMGCS1-201, Transcript of 3-hydroxy-3-methylglutaryl-CoA synthase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HMGCS1, Length 3,506 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS1-201ENST00000325110 TRDMT1O14717 391 aaKnown RBP13.26□□□□□ -0.29
HMGCS1-201ENST00000325110 TCN1P20061 433 aaPredicted RBP13.26□□□□□ -0.29
HMGCS1-201ENST00000325110 IL4RP24394 825 aa13.26□□□□□ -0.29
HMGCS1-201ENST00000325110 GNL1P36915 607 aaPredicted RBP13.26□□□□□ -0.29
HMGCS1-201ENST00000325110 AVPR1AP37288 418 aa13.26□□□□□ -0.29
HMGCS1-201ENST00000325110 SOWAHAQ2M3V2 549 aa13.26□□□□□ -0.29
HMGCS1-201ENST00000325110 HSP90AA5PQ58FG0 334 aa13.26□□□□□ -0.29
HMGCS1-201ENST00000325110 LPCAT4Q643R3 524 aa13.26□□□□□ -0.29
HMGCS1-201ENST00000325110 KCTD15Q96SI1 283 aaPredicted RBP13.26□□□□□ -0.29
HMGCS1-201ENST00000325110 GBA2Q9HCG7 927 aaPredicted RBP13.26□□□□□ -0.29
HMGCS1-201ENST00000325110 SYBUQ9NX95 663 aa13.26□□□□□ -0.29
HMGCS1-201ENST00000325110 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP13.26□□□□□ -0.296e-14■■■■■ 27.6
HMGCS1-201ENST00000325110 PIN4Q9Y237 131 aaKnown RBP13.26□□□□□ -0.29
HMGCS1-201ENST00000325110 EVPLQ92817 2033 aa13.26□□□□□ -0.29
HMGCS1-201ENST00000325110 CLDN5O00501 218 aa13.26□□□□□ -0.29
HMGCS1-201ENST00000325110 MFSD11O43934 449 aa13.26□□□□□ -0.29
HMGCS1-201ENST00000325110 DDNO94850 711 aaPredicted RBP13.26□□□□□ -0.29
HMGCS1-201ENST00000325110 SORBS2O94875 1100 aaKnown RBP13.26□□□□□ -0.29
HMGCS1-201ENST00000325110 DHRS4L1P0CG22 281 aa13.26□□□□□ -0.29
HMGCS1-201ENST00000325110 DSG1Q02413 1049 aa13.26□□□□□ -0.29
HMGCS1-201ENST00000325110 DLG2Q15700 870 aa13.26□□□□□ -0.29
HMGCS1-201ENST00000325110 TRMT5Q32P41 509 aaKnown RBP13.26□□□□□ -0.29
HMGCS1-201ENST00000325110 PDPK2PQ6A1A2 396 aa13.26□□□□□ -0.29
HMGCS1-201ENST00000325110 IRGCQ6NXR0 463 aa13.26□□□□□ -0.29
HMGCS1-201ENST00000325110 CCNYL1Q8N7R7 359 aa13.26□□□□□ -0.29
HMGCS1-201ENST00000325110 TTC16Q8NEE8 873 aa13.26□□□□□ -0.29
HMGCS1-201ENST00000325110 SIGLEC10Q96LC7 697 aa13.26□□□□□ -0.29
HMGCS1-201ENST00000325110 PANX3Q96QZ0 392 aa13.26□□□□□ -0.29
HMGCS1-201ENST00000325110 FRMD8Q9BZ67 464 aaPredicted RBP13.26□□□□□ -0.29
HMGCS1-201ENST00000325110 PRDM12Q9H4Q4 367 aa13.26□□□□□ -0.29
HMGCS1-201ENST00000325110 PTPRHQ9HD43 1115 aa13.26□□□□□ -0.29
HMGCS1-201ENST00000325110 PAPOLBQ9NRJ5 636 aaKnown RBP13.26□□□□□ -0.29
HMGCS1-201ENST00000325110 DTLQ9NZJ0 730 aa13.26□□□□□ -0.29
HMGCS1-201ENST00000325110 ITGA11Q9UKX5 1188 aa13.26□□□□□ -0.29
HMGCS1-201ENST00000325110 H3BRB1 525 aa13.26□□□□□ -0.29
HMGCS1-201ENST00000325110 GLRA3O75311 464 aa13.26□□□□□ -0.29
HMGCS1-201ENST00000325110 MX2P20592 715 aa13.26□□□□□ -0.29
HMGCS1-201ENST00000325110 LMO2P25791 158 aa13.26□□□□□ -0.29
HMGCS1-201ENST00000325110 PITX1P78337 314 aaPredicted RBP13.26□□□□□ -0.29
HMGCS1-201ENST00000325110 IL31Q6EBC2 164 aa13.26□□□□□ -0.29
HMGCS1-201ENST00000325110 OLFML1Q6UWY5 402 aa13.26□□□□□ -0.29
HMGCS1-201ENST00000325110 PACS1Q6VY07 963 aa13.26□□□□□ -0.29
HMGCS1-201ENST00000325110 PLPPR4Q7Z2D5 763 aa13.26□□□□□ -0.29
HMGCS1-201ENST00000325110 STRA8Q7Z7C7 330 aa13.26□□□□□ -0.29
HMGCS1-201ENST00000325110 DPP9Q86TI2 863 aa13.26□□□□□ -0.29
HMGCS1-201ENST00000325110 TP53INP2Q8IXH6 220 aa13.26□□□□□ -0.29
HMGCS1-201ENST00000325110 RNF169Q8NCN4 708 aa13.26□□□□□ -0.29
HMGCS1-201ENST00000325110 DDX55Q8NHQ9 600 aaKnown RBP eCLIP13.26□□□□□ -0.294e-14■■■□□ 16.7
HMGCS1-201ENST00000325110 SGF29Q96ES7 293 aa13.26□□□□□ -0.29
HMGCS1-201ENST00000325110 ZNF670Q9BS34 389 aa13.26□□□□□ -0.29
HMGCS1-201ENST00000325110 TUT1Q9H6E5 874 aaKnown RBP13.26□□□□□ -0.29
HMGCS1-201ENST00000325110 ZNF112Q9UJU3 913 aa13.26□□□□□ -0.29
HMGCS1-201ENST00000325110 SLC39A10Q9ULF5 831 aa13.26□□□□□ -0.29
HMGCS1-201ENST00000325110 PCDHA11Q9Y5I1 949 aa13.26□□□□□ -0.29
HMGCS1-201ENST00000325110 C22orf31O95567 290 aa13.25□□□□□ -0.29
HMGCS1-201ENST00000325110 ITGA2BP08514 1039 aa13.25□□□□□ -0.29
HMGCS1-201ENST00000325110 TSHRP16473 764 aa13.25□□□□□ -0.29
HMGCS1-201ENST00000325110 ZFXP17010 805 aaPredicted RBP13.25□□□□□ -0.29
HMGCS1-201ENST00000325110 IREB2P48200 963 aaKnown RBP13.25□□□□□ -0.29
HMGCS1-201ENST00000325110 KRT72Q14CN4 511 aa13.25□□□□□ -0.29
HMGCS1-201ENST00000325110 AP1ARQ63HQ0 302 aa13.25□□□□□ -0.29
HMGCS1-201ENST00000325110 DPY19L2Q6NUT2 758 aa13.25□□□□□ -0.29
HMGCS1-201ENST00000325110 ARMCX2Q7L311 632 aa13.25□□□□□ -0.29
HMGCS1-201ENST00000325110 ADGRF2Q8IZF7 708 aa13.25□□□□□ -0.29
HMGCS1-201ENST00000325110 SLC7A14Q8TBB6 771 aa13.25□□□□□ -0.29
HMGCS1-201ENST00000325110 C7orf26Q96N11 449 aa13.25□□□□□ -0.29
HMGCS1-201ENST00000325110 ZCWPW1Q9H0M4 648 aa13.25□□□□□ -0.29
HMGCS1-201ENST00000325110 TMEM216Q9P0N5 145 aa13.25□□□□□ -0.29
HMGCS1-201ENST00000325110 POLBP06746 335 aa13.25□□□□□ -0.29
HMGCS1-201ENST00000325110 IRX1P78414 480 aaPredicted RBP13.25□□□□□ -0.29
HMGCS1-201ENST00000325110 OCRLQ01968 901 aa13.25□□□□□ -0.29
HMGCS1-201ENST00000325110 STILQ15468 1287 aa13.25□□□□□ -0.29
HMGCS1-201ENST00000325110 EFHC1Q5JVL4 640 aa13.25□□□□□ -0.29
HMGCS1-201ENST00000325110 P2RY11Q96G91 374 aa13.25□□□□□ -0.29
HMGCS1-201ENST00000325110 VPS33BQ9H267 617 aa13.25□□□□□ -0.29
HMGCS1-201ENST00000325110 NXF3Q9H4D5 531 aaKnown RBP13.25□□□□□ -0.29
HMGCS1-201ENST00000325110 BFARQ9NZS9 450 aa13.25□□□□□ -0.29
HMGCS1-201ENST00000325110 BCLAF3A2AJT9 711 aaKnown RBP13.25□□□□□ -0.29
HMGCS1-201ENST00000325110 TM7SF2O76062 418 aa13.25□□□□□ -0.29
HMGCS1-201ENST00000325110 CPA3P15088 417 aa13.25□□□□□ -0.29
HMGCS1-201ENST00000325110 PDE1CQ14123 709 aaPredicted RBP13.25□□□□□ -0.29
HMGCS1-201ENST00000325110 ZNF618Q5T7W0 954 aa13.25□□□□□ -0.29
HMGCS1-201ENST00000325110 CES4AQ5XG92 561 aa13.25□□□□□ -0.29
HMGCS1-201ENST00000325110 KBTBD2Q8IY47 623 aa13.25□□□□□ -0.29
HMGCS1-201ENST00000325110 MARK4Q96L34 752 aa13.25□□□□□ -0.29
HMGCS1-201ENST00000325110 ANKRD27Q96NW4 1050 aa13.25□□□□□ -0.29
HMGCS1-201ENST00000325110 EIF2AQ9BY44 585 aaKnown RBP13.25□□□□□ -0.29
HMGCS1-201ENST00000325110 SIK2Q9H0K1 926 aa13.25□□□□□ -0.29
HMGCS1-201ENST00000325110 CACNG4Q9UBN1 327 aa13.25□□□□□ -0.29
HMGCS1-201ENST00000325110 ZNF212Q9UDV6 495 aa13.25□□□□□ -0.29
HMGCS1-201ENST00000325110 PLA2G4CQ9UP65 541 aa13.25□□□□□ -0.29
HMGCS1-201ENST00000325110 TIMM13Q9Y5L4 95 aaPredicted RBP13.25□□□□□ -0.29
HMGCS1-201ENST00000325110 EEF2KO00418 725 aaKnown RBP13.24□□□□□ -0.29
HMGCS1-201ENST00000325110 HUS1O60921 280 aa13.24□□□□□ -0.29
HMGCS1-201ENST00000325110 ENO3P13929 434 aaPredicted RBP13.24□□□□□ -0.29
HMGCS1-201ENST00000325110 L1CAMP32004 1257 aa13.24□□□□□ -0.29
HMGCS1-201ENST00000325110 DEUP1Q05D60 604 aa13.24□□□□□ -0.29
HMGCS1-201ENST00000325110 SPDYAQ5MJ70 313 aa13.24□□□□□ -0.29
HMGCS1-201ENST00000325110 RWDD4Q6NW29 188 aaKnown RBP13.24□□□□□ -0.29
HMGCS1-201ENST00000325110 CTU1Q7Z7A3 348 aaKnown RBP13.24□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms