RNA–Protein interactions for RNA: ENST00000324862.6

PRPF3-201, Transcript of pre-mRNA processing factor 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PRPF3, Length 2,433 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF3-201ENST00000324862 KLF1Q13351 362 aaPredicted RBP15.82■□□□□ 0.12
PRPF3-201ENST00000324862 ADAM15Q13444 863 aa15.82■□□□□ 0.12
PRPF3-201ENST00000324862 PPP2R5DQ14738 602 aa15.82■□□□□ 0.12
PRPF3-201ENST00000324862 ARL13BQ3SXY8 428 aa15.82■□□□□ 0.12
PRPF3-201ENST00000324862 ANKRD20A8PQ5CZ79 823 aa15.82■□□□□ 0.12
PRPF3-201ENST00000324862 RAP1GAP2Q684P5 730 aa15.82■□□□□ 0.12
PRPF3-201ENST00000324862 ANKRD54Q6NXT1 300 aa15.82■□□□□ 0.12
PRPF3-201ENST00000324862 KLHDC10Q6PID8 442 aa15.82■□□□□ 0.12
PRPF3-201ENST00000324862 RFX6Q8HWS3 928 aa15.82■□□□□ 0.12
PRPF3-201ENST00000324862 TP53INP2Q8IXH6 220 aa15.82■□□□□ 0.12
PRPF3-201ENST00000324862 SPATA4Q8NEY3 305 aa15.82■□□□□ 0.12
PRPF3-201ENST00000324862 C1orf54Q8WWF1 131 aa15.82■□□□□ 0.12
PRPF3-201ENST00000324862 TSC1Q92574 1164 aa15.82■□□□□ 0.12
PRPF3-201ENST00000324862 GCNAQ96QF7 691 aa15.82■□□□□ 0.12
PRPF3-201ENST00000324862 HINFPQ9BQA5 517 aa15.82■□□□□ 0.12
PRPF3-201ENST00000324862 C10orf88Q9H8K7 445 aa15.82■□□□□ 0.12
PRPF3-201ENST00000324862 BRWD1Q9NSI6 2320 aa15.81■□□□□ 0.12
PRPF3-201ENST00000324862 OBSL1O75147 1896 aa15.81■□□□□ 0.12
PRPF3-201ENST00000324862 SEMA3BQ13214 749 aa15.81■□□□□ 0.12
PRPF3-201ENST00000324862 CCDC85BQ15834 202 aaPredicted RBP15.81■□□□□ 0.12
PRPF3-201ENST00000324862 MS4A13Q5J8X5 152 aa15.81■□□□□ 0.12
PRPF3-201ENST00000324862 BRMS1LQ5PSV4 323 aa15.81■□□□□ 0.12
PRPF3-201ENST00000324862 RFWD3Q6PCD5 774 aa15.81■□□□□ 0.12
PRPF3-201ENST00000324862 RTL10Q7L3V2 364 aa15.81■□□□□ 0.12
PRPF3-201ENST00000324862 ZNF276Q8N554 614 aa15.81■□□□□ 0.12
PRPF3-201ENST00000324862 VANGL2Q9ULK5 521 aa15.81■□□□□ 0.12
PRPF3-201ENST00000324862 KRIT1O00522 736 aa15.8■□□□□ 0.12
PRPF3-201ENST00000324862 CES2O00748 559 aa15.8■□□□□ 0.12
PRPF3-201ENST00000324862 PECAM1P16284 738 aaPredicted RBP15.8■□□□□ 0.12
PRPF3-201ENST00000324862 CORO1AP31146 461 aaKnown RBP15.8■□□□□ 0.12
PRPF3-201ENST00000324862 PAFAH1B1P43034 410 aa15.8■□□□□ 0.12
PRPF3-201ENST00000324862 VCPP55072 806 aaKnown RBP15.8■□□□□ 0.12
PRPF3-201ENST00000324862 NAA30Q147X3 362 aaPredicted RBP15.8■□□□□ 0.12
PRPF3-201ENST00000324862 TAZQ16635 292 aa15.8■□□□□ 0.12
PRPF3-201ENST00000324862 TMEM184AQ6ZMB5 413 aa15.8■□□□□ 0.12
PRPF3-201ENST00000324862 TADA2BQ86TJ2 420 aa15.8■□□□□ 0.12
PRPF3-201ENST00000324862 CIR1Q86X95 450 aaPredicted RBP15.8■□□□□ 0.12
PRPF3-201ENST00000324862 FAM71BQ8TC56 605 aa15.8■□□□□ 0.12
PRPF3-201ENST00000324862 RNF157Q96PX1 679 aa15.8■□□□□ 0.12
PRPF3-201ENST00000324862 CDK5RAP1Q96SZ6 601 aaKnown RBP15.8■□□□□ 0.12
PRPF3-201ENST00000324862 NCAPGQ9BPX3 1015 aa15.8■□□□□ 0.12
PRPF3-201ENST00000324862 DDX47Q9H0S4 455 aaKnown RBP15.8■□□□□ 0.12
PRPF3-201ENST00000324862 EPC1Q9H2F5 836 aa15.8■□□□□ 0.12
PRPF3-201ENST00000324862 MPP6Q9NZW5 540 aa15.8■□□□□ 0.12
PRPF3-201ENST00000324862 NEU3Q9UQ49 428 aa15.8■□□□□ 0.12
PRPF3-201ENST00000324862 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP15.8■□□□□ 0.12
PRPF3-201ENST00000324862 GREM1O60565 184 aa15.8■□□□□ 0.12
PRPF3-201ENST00000324862 APOEP02649 317 aa15.8■□□□□ 0.12
PRPF3-201ENST00000324862 SLC6A4P31645 630 aa15.8■□□□□ 0.12
PRPF3-201ENST00000324862 SNX1Q13596 522 aa15.8■□□□□ 0.12
PRPF3-201ENST00000324862 RWDD4Q6NW29 188 aaKnown RBP15.8■□□□□ 0.12
PRPF3-201ENST00000324862 KLHL7Q8IXQ5 586 aa15.8■□□□□ 0.12
PRPF3-201ENST00000324862 CMTM8Q8IZV2 173 aa15.8■□□□□ 0.12
PRPF3-201ENST00000324862 PRELID2Q8N945 189 aa15.8■□□□□ 0.12
PRPF3-201ENST00000324862 MYLIPQ8WY64 445 aa15.8■□□□□ 0.12
PRPF3-201ENST00000324862 P2RY11Q96G91 374 aa15.8■□□□□ 0.12
PRPF3-201ENST00000324862 NDFIP2Q9NV92 336 aa15.8■□□□□ 0.12
PRPF3-201ENST00000324862 AGO1Q9UL18 857 aaKnown RBP15.8■□□□□ 0.12
PRPF3-201ENST00000324862 TRAV19A0A0A6YYK7 116 aa15.79■□□□□ 0.12
PRPF3-201ENST00000324862 EEF2KO00418 725 aaKnown RBP15.79■□□□□ 0.12
PRPF3-201ENST00000324862 NNTQ13423 1086 aa15.79■□□□□ 0.12
PRPF3-201ENST00000324862 PDK2Q15119 407 aa15.79■□□□□ 0.12
PRPF3-201ENST00000324862 C1orf228Q6PIY5 440 aa15.79■□□□□ 0.12
PRPF3-201ENST00000324862 RFX8Q6ZV50 586 aa15.79■□□□□ 0.12
PRPF3-201ENST00000324862 GET4Q7L5D6 327 aaPredicted RBP15.79■□□□□ 0.12
PRPF3-201ENST00000324862 GPR149Q86SP6 731 aa15.79■□□□□ 0.12
PRPF3-201ENST00000324862 PLD5Q8N7P1 536 aa15.79■□□□□ 0.12
PRPF3-201ENST00000324862 IGSF8Q969P0 613 aa15.79■□□□□ 0.12
PRPF3-201ENST00000324862 ARHGEF4Q9NR80 690 aa15.79■□□□□ 0.12
PRPF3-201ENST00000324862 CFAP97Q9P2B7 532 aa15.79■□□□□ 0.12
PRPF3-201ENST00000324862 TTC7AQ9ULT0 858 aaPredicted RBP15.79■□□□□ 0.12
PRPF3-201ENST00000324862 HBS1LQ9Y450 684 aaKnown RBP15.79■□□□□ 0.12
PRPF3-201ENST00000324862 C2orf16Q68DN1 1984 aa15.79■□□□□ 0.12
PRPF3-201ENST00000324862 EPHB2P29323 1055 aa15.79■□□□□ 0.12
PRPF3-201ENST00000324862 AVPR1AP37288 418 aa15.79■□□□□ 0.12
PRPF3-201ENST00000324862 KCNJ1P48048 391 aa15.79■□□□□ 0.12
PRPF3-201ENST00000324862 SGSHP51688 502 aa15.79■□□□□ 0.12
PRPF3-201ENST00000324862 MLLT6P55198 1093 aaPredicted RBP15.79■□□□□ 0.12
PRPF3-201ENST00000324862 COG7P83436 770 aa15.79■□□□□ 0.12
PRPF3-201ENST00000324862 GBE1Q04446 702 aa15.79■□□□□ 0.12
PRPF3-201ENST00000324862 RING1Q06587 406 aa15.79■□□□□ 0.12
PRPF3-201ENST00000324862 AUHQ13825 339 aaKnown RBP15.79■□□□□ 0.12
PRPF3-201ENST00000324862 CTC1Q2NKJ3 1217 aa15.79■□□□□ 0.12
PRPF3-201ENST00000324862 FAM133BQ5BKY9 247 aaKnown RBP15.79■□□□□ 0.12
PRPF3-201ENST00000324862 MAP7D3Q8IWC1 876 aa15.79■□□□□ 0.12
PRPF3-201ENST00000324862 CFAP52Q8N1V2 620 aa15.79■□□□□ 0.12
PRPF3-201ENST00000324862 PPM1EQ8WY54 764 aa15.79■□□□□ 0.12
PRPF3-201ENST00000324862 USP13Q92995 863 aaPredicted RBP15.79■□□□□ 0.12
PRPF3-201ENST00000324862 BHMTQ93088 406 aa15.79■□□□□ 0.12
PRPF3-201ENST00000324862 BTN2A3PQ96KV6 586 aa15.79■□□□□ 0.12
PRPF3-201ENST00000324862 HAPLN3Q96S86 360 aa15.79■□□□□ 0.12
PRPF3-201ENST00000324862 ZNF670Q9BS34 389 aa15.79■□□□□ 0.12
PRPF3-201ENST00000324862 DZANK1Q9NVP4 752 aa15.79■□□□□ 0.12
PRPF3-201ENST00000324862 HEY1Q9Y5J3 304 aa15.79■□□□□ 0.12
PRPF3-201ENST00000324862 E9PAM4 449 aa15.78■□□□□ 0.12
PRPF3-201ENST00000324862 H3BQ06 376 aaPredicted RBP15.78■□□□□ 0.12
PRPF3-201ENST00000324862 CNTN5O94779 1100 aa15.78■□□□□ 0.12
PRPF3-201ENST00000324862 SP100P23497 879 aaPredicted RBP15.78■□□□□ 0.12
PRPF3-201ENST00000324862 ARL4AP40617 200 aa15.78■□□□□ 0.12
PRPF3-201ENST00000324862 HARS2P49590 506 aaKnown RBP15.78■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms