RNA–Protein interactions for RNA: ENST00000324444.7

SYNE4-201, Transcript of spectrin repeat containing nuclear envelope family member 4, humanhuman

APPRIS P3 TSL 5 BASIC

Gene SYNE4, Length 1,354 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE4-201ENST00000324444 TRIP4Q15650 581 aaPredicted RBP18.68■□□□□ 0.58
SYNE4-201ENST00000324444 CCNG2Q16589 344 aa18.68■□□□□ 0.58
SYNE4-201ENST00000324444 C10orf120Q5SQS8 335 aa18.68■□□□□ 0.58
SYNE4-201ENST00000324444 OTUD1Q5VV17 481 aaPredicted RBP18.68■□□□□ 0.58
SYNE4-201ENST00000324444 BBS12Q6ZW61 710 aa18.68■□□□□ 0.58
SYNE4-201ENST00000324444 RFX6Q8HWS3 928 aa18.68■□□□□ 0.58
SYNE4-201ENST00000324444 UNC45BQ8IWX7 931 aa18.68■□□□□ 0.58
SYNE4-201ENST00000324444 ATP6V0D2Q8N8Y2 350 aa18.68■□□□□ 0.58
SYNE4-201ENST00000324444 C12orf50Q8NA57 414 aaPredicted RBP18.68■□□□□ 0.58
SYNE4-201ENST00000324444 MAGOHBQ96A72 148 aaKnown RBP18.68■□□□□ 0.58
SYNE4-201ENST00000324444 NECTIN4Q96NY8 510 aa18.68■□□□□ 0.58
SYNE4-201ENST00000324444 RNF157Q96PX1 679 aa18.68■□□□□ 0.58
SYNE4-201ENST00000324444 EPAS1Q99814 870 aa18.68■□□□□ 0.58
SYNE4-201ENST00000324444 AP1M1Q9BXS5 423 aa18.68■□□□□ 0.58
SYNE4-201ENST00000324444 LRRC19Q9H756 370 aa18.68■□□□□ 0.58
SYNE4-201ENST00000324444 ARHGEF38Q9NXL2 777 aa18.68■□□□□ 0.58
SYNE4-201ENST00000324444 DONSONQ9NYP3 566 aa18.68■□□□□ 0.58
SYNE4-201ENST00000324444 MARCH2Q9P0N8 246 aa18.68■□□□□ 0.58
SYNE4-201ENST00000324444 STIM2Q9P246 746 aa18.68■□□□□ 0.58
SYNE4-201ENST00000324444 UQCRHLA0A096LP55 91 aa18.67■□□□□ 0.58
SYNE4-201ENST00000324444 ZNF840PA6NDX5 716 aa18.67■□□□□ 0.58
SYNE4-201ENST00000324444 SOBPA7XYQ1 873 aa18.67■□□□□ 0.58
SYNE4-201ENST00000324444 UQCRHP07919 91 aa18.67■□□□□ 0.58
SYNE4-201ENST00000324444 TGM2P21980 687 aa18.67■□□□□ 0.58
SYNE4-201ENST00000324444 CDC25CP30307 473 aa18.67■□□□□ 0.58
SYNE4-201ENST00000324444 TBX4P57082 545 aa18.67■□□□□ 0.58
SYNE4-201ENST00000324444 KAZNQ674X7 775 aa18.67■□□□□ 0.58
SYNE4-201ENST00000324444 NUGGCQ68CJ6 796 aa18.67■□□□□ 0.58
SYNE4-201ENST00000324444 AADACL2Q6P093 401 aa18.67■□□□□ 0.58
SYNE4-201ENST00000324444 DRICH1Q6PGQ1 229 aaPredicted RBP18.67■□□□□ 0.58
SYNE4-201ENST00000324444 SYDE1Q6ZW31 735 aaPredicted RBP18.67■□□□□ 0.58
SYNE4-201ENST00000324444 PDZD4Q76G19 769 aaPredicted RBP18.67■□□□□ 0.58
SYNE4-201ENST00000324444 CCDC185Q8N715 623 aa18.67■□□□□ 0.58
SYNE4-201ENST00000324444 ADAM32Q8TC27 787 aa18.67■□□□□ 0.58
SYNE4-201ENST00000324444 HEMGNQ9BXL5 484 aa18.67■□□□□ 0.58
SYNE4-201ENST00000324444 TKTL2Q9H0I9 626 aa18.67■□□□□ 0.58
SYNE4-201ENST00000324444 SFXN1Q9H9B4 322 aa18.67■□□□□ 0.58
SYNE4-201ENST00000324444 KLHL11Q9NVR0 708 aa18.67■□□□□ 0.58
SYNE4-201ENST00000324444 ZDHHC7Q9NXF8 308 aa18.67■□□□□ 0.58
SYNE4-201ENST00000324444 ZMYM5Q9UJ78 669 aa18.67■□□□□ 0.58
SYNE4-201ENST00000324444 RASAL2Q9UJF2 1139 aa18.67■□□□□ 0.58
SYNE4-201ENST00000324444 APOL1O14791 398 aa18.66■□□□□ 0.58
SYNE4-201ENST00000324444 ZMYND10O75800 440 aa18.66■□□□□ 0.58
SYNE4-201ENST00000324444 PAPLNO95428 1278 aa18.66■□□□□ 0.58
SYNE4-201ENST00000324444 SPATA31D3P0C874 917 aa18.66■□□□□ 0.58
SYNE4-201ENST00000324444 PITX1P78337 314 aaPredicted RBP18.66■□□□□ 0.58
SYNE4-201ENST00000324444 EFEMP1Q12805 493 aa18.66■□□□□ 0.58
SYNE4-201ENST00000324444 ZC3H12AQ5D1E8 599 aaKnown RBP18.66■□□□□ 0.58
SYNE4-201ENST00000324444 PPP6R3Q5H9R7 873 aaPredicted RBP18.66■□□□□ 0.58
SYNE4-201ENST00000324444 SPATA31D4Q6ZUB0 917 aa18.66■□□□□ 0.58
SYNE4-201ENST00000324444 MRPS31Q92665 395 aaKnown RBP18.66■□□□□ 0.58
SYNE4-201ENST00000324444 FAF2Q96CS3 445 aa18.66■□□□□ 0.58
SYNE4-201ENST00000324444 C1orf74Q96LT6 269 aa18.66■□□□□ 0.58
SYNE4-201ENST00000324444 RIPOR3Q96MK2 946 aa18.66■□□□□ 0.58
SYNE4-201ENST00000324444 KRT12Q99456 494 aa18.66■□□□□ 0.58
SYNE4-201ENST00000324444 POMKQ9H5K3 350 aa18.66■□□□□ 0.58
SYNE4-201ENST00000324444 MAN1C1Q9NR34 630 aa18.66■□□□□ 0.58
SYNE4-201ENST00000324444 OSER1Q9NX31 292 aa18.66■□□□□ 0.58
SYNE4-201ENST00000324444 SMARCAL1Q9NZC9 954 aa18.66■□□□□ 0.58
SYNE4-201ENST00000324444 DENND4CQ5VZ89 1909 aa18.65■□□□□ 0.58
SYNE4-201ENST00000324444 FAM187AA6NFU0 413 aa18.65■□□□□ 0.58
SYNE4-201ENST00000324444 APOC4-APOC2K7ER74 178 aa18.65■□□□□ 0.58
SYNE4-201ENST00000324444 DAPK3O43293 454 aa18.65■□□□□ 0.58
SYNE4-201ENST00000324444 CST8O60676 142 aa18.65■□□□□ 0.58
SYNE4-201ENST00000324444 APOC2P02655 101 aa18.65■□□□□ 0.58
SYNE4-201ENST00000324444 MTHFRP42898 656 aa18.65■□□□□ 0.58
SYNE4-201ENST00000324444 NR2C2P49116 596 aa18.65■□□□□ 0.58
SYNE4-201ENST00000324444 ATXN1P54253 815 aaKnown RBP18.65■□□□□ 0.58
SYNE4-201ENST00000324444 ANKRD20A8PQ5CZ79 823 aa18.65■□□□□ 0.58
SYNE4-201ENST00000324444 TMC5Q6UXY8 1006 aa18.65■□□□□ 0.58
SYNE4-201ENST00000324444 KLHL7Q8IXQ5 586 aa18.65■□□□□ 0.58
SYNE4-201ENST00000324444 PRELID2Q8N945 189 aa18.65■□□□□ 0.58
SYNE4-201ENST00000324444 ACSF2Q96CM8 615 aaPredicted RBP18.65■□□□□ 0.58
SYNE4-201ENST00000324444 SLC39A13Q96H72 371 aa18.65■□□□□ 0.58
SYNE4-201ENST00000324444 ADAM33Q9BZ11 813 aa18.65■□□□□ 0.58
SYNE4-201ENST00000324444 RAB17Q9H0T7 212 aa18.65■□□□□ 0.58
SYNE4-201ENST00000324444 ASAH2Q9NR71 780 aa18.65■□□□□ 0.58
SYNE4-201ENST00000324444 CALCOCO1Q9P1Z2 691 aa18.65■□□□□ 0.58
SYNE4-201ENST00000324444 PCYOX1Q9UHG3 505 aa18.65■□□□□ 0.58
SYNE4-201ENST00000324444 SFMBT1Q9UHJ3 866 aa18.65■□□□□ 0.58
SYNE4-201ENST00000324444 HCN4Q9Y3Q4 1203 aa18.65■□□□□ 0.58
SYNE4-201ENST00000324444 RAD54BQ9Y620 910 aa18.65■□□□□ 0.58
SYNE4-201ENST00000324444 ANAPC1Q9H1A4 1944 aa18.65■□□□□ 0.58
SYNE4-201ENST00000324444 EEF2KO00418 725 aaKnown RBP18.64■□□□□ 0.57
SYNE4-201ENST00000324444 GAS8O95995 478 aa18.64■□□□□ 0.57
SYNE4-201ENST00000324444 KRT10P13645 584 aa18.64■□□□□ 0.57
SYNE4-201ENST00000324444 PTPN2P17706 415 aa18.64■□□□□ 0.57
SYNE4-201ENST00000324444 DDX6P26196 483 aaKnown RBP eCLIP18.64■□□□□ 0.57
SYNE4-201ENST00000324444 NRG1Q02297 640 aaPredicted RBP18.64■□□□□ 0.57
SYNE4-201ENST00000324444 ERCC6LQ2NKX8 1250 aa18.64■□□□□ 0.57
SYNE4-201ENST00000324444 RAB6CQ53S08 254 aa18.64■□□□□ 0.57
SYNE4-201ENST00000324444 ATAT1Q5SQI0 421 aa18.64■□□□□ 0.57
SYNE4-201ENST00000324444 CCDC137Q6PK04 289 aaKnown RBP18.64■□□□□ 0.57
SYNE4-201ENST00000324444 ADAT2Q7Z6V5 191 aaKnown RBP18.64■□□□□ 0.57
SYNE4-201ENST00000324444 CCDC105Q8IYK2 499 aa18.64■□□□□ 0.57
SYNE4-201ENST00000324444 NOA1Q8NC60 698 aaKnown RBP18.64■□□□□ 0.57
SYNE4-201ENST00000324444 ATL2Q8NHH9 583 aa18.64■□□□□ 0.57
SYNE4-201ENST00000324444 CCHCR1Q8TD31 782 aa18.64■□□□□ 0.57
SYNE4-201ENST00000324444 TSC1Q92574 1164 aa18.64■□□□□ 0.57
SYNE4-201ENST00000324444 P3H4Q92791 437 aa18.64■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms