RNA–Protein interactions for RNA: ENST00000320516.4

CCDC65-202, Transcript of coiled-coil domain containing 65, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCDC65, Length 1,775 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC65-202ENST00000320516 USP18Q9UMW8 372 aa10.31□□□□□ -0.76
CCDC65-202ENST00000320516 PCDHGA5Q9Y5G8 931 aa10.31□□□□□ -0.76
CCDC65-202ENST00000320516 STON1Q9Y6Q2 735 aa10.31□□□□□ -0.76
CCDC65-202ENST00000320516 ABCA7Q8IZY2 2146 aa10.31□□□□□ -0.76
CCDC65-202ENST00000320516 LGALS16A8MUM7 142 aa10.31□□□□□ -0.76
CCDC65-202ENST00000320516 HSF2BPO75031 334 aa10.31□□□□□ -0.76
CCDC65-202ENST00000320516 RHOBTB1O94844 696 aa10.31□□□□□ -0.76
CCDC65-202ENST00000320516 GABRB2P47870 512 aa10.31□□□□□ -0.76
CCDC65-202ENST00000320516 ID4P47928 161 aa10.31□□□□□ -0.76
CCDC65-202ENST00000320516 SLC6A3Q01959 620 aa10.31□□□□□ -0.76
CCDC65-202ENST00000320516 LMNB2Q03252 620 aa10.31□□□□□ -0.76
CCDC65-202ENST00000320516 ELF2Q15723 593 aa10.31□□□□□ -0.76
CCDC65-202ENST00000320516 DCAF6Q58WW2 860 aa10.31□□□□□ -0.76
CCDC65-202ENST00000320516 ZC3H12AQ5D1E8 599 aaKnown RBP10.31□□□□□ -0.76
CCDC65-202ENST00000320516 MS4A13Q5J8X5 152 aa10.31□□□□□ -0.76
CCDC65-202ENST00000320516 FKBP15Q5T1M5 1219 aa10.31□□□□□ -0.76
CCDC65-202ENST00000320516 SDE2Q6IQ49 451 aa10.31□□□□□ -0.76
CCDC65-202ENST00000320516 PRR23CQ6ZRP0 262 aa10.31□□□□□ -0.76
CCDC65-202ENST00000320516 SLC26A9Q7LBE3 791 aa10.31□□□□□ -0.76
CCDC65-202ENST00000320516 ADIPOR2Q86V24 386 aa10.31□□□□□ -0.76
CCDC65-202ENST00000320516 TMEM35BQ8NCS4 154 aa10.31□□□□□ -0.76
CCDC65-202ENST00000320516 ZNF397Q8NF99 534 aaPredicted RBP10.31□□□□□ -0.76
CCDC65-202ENST00000320516 RLN3Q8WXF3 142 aa10.31□□□□□ -0.76
CCDC65-202ENST00000320516 NUCKS1Q9H1E3 243 aaKnown RBP10.31□□□□□ -0.76
CCDC65-202ENST00000320516 CALCOCO1Q9P1Z2 691 aa10.31□□□□□ -0.76
CCDC65-202ENST00000320516 BCCIPQ9P287 314 aaKnown RBP eCLIP10.31□□□□□ -0.76
CCDC65-202ENST00000320516 MBD1Q9UIS9 605 aaPredicted RBP10.31□□□□□ -0.76
CCDC65-202ENST00000320516 RAD54BQ9Y620 910 aa10.31□□□□□ -0.76
CCDC65-202ENST00000320516 DYNC1LI1Q9Y6G9 523 aaKnown RBP10.31□□□□□ -0.76
CCDC65-202ENST00000320516 PLXND1Q9Y4D7 1925 aa10.31□□□□□ -0.76
CCDC65-202ENST00000320516 KCNU1A8MYU2 1149 aa10.3□□□□□ -0.76
CCDC65-202ENST00000320516 PRR5-ARHGAP8B1AHC4 643 aa10.3□□□□□ -0.76
CCDC65-202ENST00000320516 TIMM44O43615 452 aa10.3□□□□□ -0.76
CCDC65-202ENST00000320516 TBL1XO60907 577 aa10.3□□□□□ -0.76
CCDC65-202ENST00000320516 GRAP2O75791 330 aa10.3□□□□□ -0.76
CCDC65-202ENST00000320516 TPM2P07951 284 aa10.3□□□□□ -0.76
CCDC65-202ENST00000320516 ZNF806P0C7X5 589 aa10.3□□□□□ -0.76
CCDC65-202ENST00000320516 NDUFV2P19404 249 aa10.3□□□□□ -0.76
CCDC65-202ENST00000320516 POLR2FP61218 127 aaKnown RBP10.3□□□□□ -0.76
CCDC65-202ENST00000320516 RPS24P62847 133 aaKnown RBP10.3□□□□□ -0.76
CCDC65-202ENST00000320516 ARHGAP8P85298 464 aa10.3□□□□□ -0.76
CCDC65-202ENST00000320516 ZNF234Q14588 700 aa10.3□□□□□ -0.76
CCDC65-202ENST00000320516 SYCP1Q15431 976 aa10.3□□□□□ -0.76
CCDC65-202ENST00000320516 ANO6Q4KMQ2 910 aa10.3□□□□□ -0.76
CCDC65-202ENST00000320516 OTUD1Q5VV17 481 aaPredicted RBP10.3□□□□□ -0.76
CCDC65-202ENST00000320516 TAF3Q5VWG9 929 aa10.3□□□□□ -0.76
CCDC65-202ENST00000320516 OR6B2Q6IFH4 312 aa10.3□□□□□ -0.76
CCDC65-202ENST00000320516 ZDHHC17Q8IUH5 632 aa10.3□□□□□ -0.76
CCDC65-202ENST00000320516 HJURPQ8NCD3 748 aaPredicted RBP10.3□□□□□ -0.76
CCDC65-202ENST00000320516 WFIKKN2Q8TEU8 576 aa10.3□□□□□ -0.76
CCDC65-202ENST00000320516 UCMAQ8WVF2 138 aa10.3□□□□□ -0.76
CCDC65-202ENST00000320516 SORCS1Q8WY21 1168 aa10.3□□□□□ -0.76
CCDC65-202ENST00000320516 MRGPRX1Q96LB2 322 aa10.3□□□□□ -0.76
CCDC65-202ENST00000320516 ERGIC2Q96RQ1 377 aa10.3□□□□□ -0.76
CCDC65-202ENST00000320516 DDX50Q9BQ39 737 aaKnown RBP10.3□□□□□ -0.76
CCDC65-202ENST00000320516 BPIFA3Q9BQP9 254 aa10.3□□□□□ -0.76
CCDC65-202ENST00000320516 FAM207AQ9NSI2 230 aaPredicted RBP10.3□□□□□ -0.76
CCDC65-202ENST00000320516 ABCB8Q9NUT2 735 aa10.3□□□□□ -0.76
CCDC65-202ENST00000320516 SLTMQ9NWH9 1034 aaKnown RBP eCLIP10.3□□□□□ -0.76
CCDC65-202ENST00000320516 NOCTQ9UK39 431 aaKnown RBP10.3□□□□□ -0.76
CCDC65-202ENST00000320516 DAAM1Q9Y4D1 1078 aa10.3□□□□□ -0.76
CCDC65-202ENST00000320516 CEP83Q9Y592 693 aa10.3□□□□□ -0.76
CCDC65-202ENST00000320516 MUC22E2RYF6 1773 aaPredicted RBP10.29□□□□□ -0.76
CCDC65-202ENST00000320516 BCLAF3A2AJT9 711 aaKnown RBP10.29□□□□□ -0.76
CCDC65-202ENST00000320516 DAB1O75553 588 aa10.29□□□□□ -0.76
CCDC65-202ENST00000320516 LSM8O95777 96 aaKnown RBP10.29□□□□□ -0.76
CCDC65-202ENST00000320516 MOCS2O96007 188 aaPredicted RBP10.29□□□□□ -0.76
CCDC65-202ENST00000320516 APOEP02649 317 aa10.29□□□□□ -0.76
CCDC65-202ENST00000320516 MMEP08473 750 aa10.29□□□□□ -0.76
CCDC65-202ENST00000320516 C7P10643 843 aa10.29□□□□□ -0.76
CCDC65-202ENST00000320516 PABPC1P11940 636 aaKnown RBP10.29□□□□□ -0.76
CCDC65-202ENST00000320516 ATP1A3P13637 1013 aa10.29□□□□□ -0.76
CCDC65-202ENST00000320516 PRKCHP24723 683 aa10.29□□□□□ -0.76
CCDC65-202ENST00000320516 GBP1P32455 592 aa10.29□□□□□ -0.76
CCDC65-202ENST00000320516 CD70P32970 193 aa10.29□□□□□ -0.76
CCDC65-202ENST00000320516 SOX5P35711 763 aa10.29□□□□□ -0.76
CCDC65-202ENST00000320516 SCNN1AP37088 669 aa10.29□□□□□ -0.76
CCDC65-202ENST00000320516 MPLP40238 635 aa10.29□□□□□ -0.76
CCDC65-202ENST00000320516 SNX16P57768 344 aa10.29□□□□□ -0.76
CCDC65-202ENST00000320516 NOMO3P69849 1222 aa10.29□□□□□ -0.76
CCDC65-202ENST00000320516 CDK17Q00537 523 aa10.29□□□□□ -0.76
CCDC65-202ENST00000320516 PTPRNQ16849 979 aa10.29□□□□□ -0.76
CCDC65-202ENST00000320516 RSPO4Q2I0M5 234 aaPredicted RBP10.29□□□□□ -0.76
CCDC65-202ENST00000320516 CAVIN1Q6NZI2 390 aaKnown RBP10.29□□□□□ -0.76
CCDC65-202ENST00000320516 CHST9Q7L1S5 443 aa10.29□□□□□ -0.76
CCDC65-202ENST00000320516 ZNF677Q86XU0 584 aa10.29□□□□□ -0.76
CCDC65-202ENST00000320516 DHX40Q8IX18 779 aaKnown RBP10.29□□□□□ -0.76
CCDC65-202ENST00000320516 AHI1Q8N157 1196 aa10.29□□□□□ -0.76
CCDC65-202ENST00000320516 PGBD3Q8N328 593 aa10.29□□□□□ -0.76
CCDC65-202ENST00000320516 AOPEPQ8N6M6 819 aa10.29□□□□□ -0.76
CCDC65-202ENST00000320516 FIBINQ8TAL6 211 aa10.29□□□□□ -0.76
CCDC65-202ENST00000320516 C18orf8Q96DM3 657 aa10.29□□□□□ -0.76
CCDC65-202ENST00000320516 BTN2A3PQ96KV6 586 aa10.29□□□□□ -0.76
CCDC65-202ENST00000320516 PRMT1Q99873 361 aaKnown RBP10.29□□□□□ -0.76
CCDC65-202ENST00000320516 FUCA2Q9BTY2 467 aa10.29□□□□□ -0.76
CCDC65-202ENST00000320516 ADAM33Q9BZ11 813 aa10.29□□□□□ -0.76
CCDC65-202ENST00000320516 CIPCQ9C0C6 399 aa10.29□□□□□ -0.76
CCDC65-202ENST00000320516 NLRC4Q9NPP4 1024 aa10.29□□□□□ -0.76
CCDC65-202ENST00000320516 GGA2Q9UJY4 613 aa10.29□□□□□ -0.76
CCDC65-202ENST00000320516 CACNA1AO00555 2505 aa10.29□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms