RNA–Protein interactions for RNA: ENST00000320280.8

SCAMP1-201, Transcript of secretory carrier membrane protein 1, humanhuman

TSL 3

Gene SCAMP1, Length 3,766 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP1-201ENST00000320280 ZMIZ2Q8NF64 920 aa3.43□□□□□ -1.86
SCAMP1-201ENST00000320280 WFIKKN2Q8TEU8 576 aa3.43□□□□□ -1.86
SCAMP1-201ENST00000320280 ACSF2Q96CM8 615 aaPredicted RBP3.43□□□□□ -1.86
SCAMP1-201ENST00000320280 TWNKQ96RR1 684 aa3.43□□□□□ -1.86
SCAMP1-201ENST00000320280 NAP1L3Q99457 506 aaPredicted RBP3.43□□□□□ -1.86
SCAMP1-201ENST00000320280 NPY6RQ99463 290 aa3.43□□□□□ -1.86
SCAMP1-201ENST00000320280 C19orf43Q9BQ61 176 aa3.43□□□□□ -1.86
SCAMP1-201ENST00000320280 CRACR2AQ9BSW2 395 aa3.43□□□□□ -1.86
SCAMP1-201ENST00000320280 FAM129AQ9BZQ8 928 aa3.43□□□□□ -1.86
SCAMP1-201ENST00000320280 NLRC4Q9NPP4 1024 aa3.43□□□□□ -1.86
SCAMP1-201ENST00000320280 HOMER3Q9NSC5 361 aa3.43□□□□□ -1.86
SCAMP1-201ENST00000320280 MTPAPQ9NVV4 582 aaKnown RBP eCLIP3.43□□□□□ -1.86
SCAMP1-201ENST00000320280 TTC7AQ9ULT0 858 aaPredicted RBP3.43□□□□□ -1.86
SCAMP1-201ENST00000320280 NME7Q9Y5B8 376 aa3.43□□□□□ -1.86
SCAMP1-201ENST00000320280 PCDHA13Q9Y5I0 950 aa3.43□□□□□ -1.86
SCAMP1-201ENST00000320280 CEP350Q5VT06 3117 aa3.43□□□□□ -1.86
SCAMP1-201ENST00000320280 TMEM191CA6NGB0 347 aa3.42□□□□□ -1.86
SCAMP1-201ENST00000320280 C2CD4BA6NLJ0 364 aa3.42□□□□□ -1.86
SCAMP1-201ENST00000320280 ANHXE9PGG2 379 aa3.42□□□□□ -1.86
SCAMP1-201ENST00000320280 EPHB6O15197 1021 aa3.42□□□□□ -1.86
SCAMP1-201ENST00000320280 AP5Z1O43299 807 aa3.42□□□□□ -1.86
SCAMP1-201ENST00000320280 PROSCO94903 275 aa3.42□□□□□ -1.86
SCAMP1-201ENST00000320280 ATF6P18850 670 aa3.42□□□□□ -1.86
SCAMP1-201ENST00000320280 CD58P19256 250 aa3.42□□□□□ -1.86
SCAMP1-201ENST00000320280 BRD2P25440 801 aaKnown RBP3.42□□□□□ -1.86
SCAMP1-201ENST00000320280 AFF1P51825 1210 aaKnown RBP3.42□□□□□ -1.86
SCAMP1-201ENST00000320280 RABGGTBP53611 331 aa3.42□□□□□ -1.86
SCAMP1-201ENST00000320280 GEMIN4P57678 1058 aaKnown RBP3.42□□□□□ -1.86
SCAMP1-201ENST00000320280 CYP27A1Q02318 531 aa3.42□□□□□ -1.86
SCAMP1-201ENST00000320280 PLAURQ03405 335 aa3.42□□□□□ -1.86
SCAMP1-201ENST00000320280 TAF12Q16514 161 aa3.42□□□□□ -1.86
SCAMP1-201ENST00000320280 ARHGAP29Q52LW3 1261 aa3.42□□□□□ -1.86
SCAMP1-201ENST00000320280 CCDC122Q5T0U0 273 aa3.42□□□□□ -1.86
SCAMP1-201ENST00000320280 BTBD8Q5XKL5 378 aa3.42□□□□□ -1.86
SCAMP1-201ENST00000320280 HTR3DQ70Z44 454 aa3.42□□□□□ -1.86
SCAMP1-201ENST00000320280 TMEM173Q86WV6 379 aaPredicted RBP3.42□□□□□ -1.86
SCAMP1-201ENST00000320280 AGGF1Q8N302 714 aaeCLIP3.42□□□□□ -1.86
SCAMP1-201ENST00000320280 DDX51Q8N8A6 666 aaKnown RBP eCLIP3.42□□□□□ -1.86
SCAMP1-201ENST00000320280 TFAP2BQ92481 460 aa3.42□□□□□ -1.86
SCAMP1-201ENST00000320280 FBXO32Q969P5 355 aa3.42□□□□□ -1.86
SCAMP1-201ENST00000320280 ZNF707Q96C28 371 aaPredicted RBP3.42□□□□□ -1.86
SCAMP1-201ENST00000320280 SLC39A13Q96H72 371 aa3.42□□□□□ -1.86
SCAMP1-201ENST00000320280 RBM41Q96IZ5 413 aaKnown RBP3.42□□□□□ -1.86
SCAMP1-201ENST00000320280 OSBPL6Q9BZF3 934 aa3.42□□□□□ -1.86
SCAMP1-201ENST00000320280 C8orf33Q9H7E9 229 aaPredicted RBP3.42□□□□□ -1.86
SCAMP1-201ENST00000320280 CYP4F11Q9HBI6 524 aa3.42□□□□□ -1.86
SCAMP1-201ENST00000320280 SLC2A4RGQ9NR83 387 aa3.42□□□□□ -1.86
SCAMP1-201ENST00000320280 THG1LQ9NWX6 298 aaKnown RBP3.42□□□□□ -1.86
SCAMP1-201ENST00000320280 MTMR10Q9NXD2 777 aa3.42□□□□□ -1.86
SCAMP1-201ENST00000320280 AJAP1Q9UKB5 411 aaPredicted RBP3.42□□□□□ -1.86
SCAMP1-201ENST00000320280 CDH7Q9ULB5 785 aa3.42□□□□□ -1.86
SCAMP1-201ENST00000320280 HCFC2Q9Y5Z7 792 aa3.42□□□□□ -1.86
SCAMP1-201ENST00000320280 NCAM2O15394 837 aa3.42□□□□□ -1.86
SCAMP1-201ENST00000320280 RNF8O76064 485 aa3.42□□□□□ -1.86
SCAMP1-201ENST00000320280 APOEP02649 317 aa3.42□□□□□ -1.86
SCAMP1-201ENST00000320280 MMEP08473 750 aa3.42□□□□□ -1.86
SCAMP1-201ENST00000320280 DNAJB1P25685 340 aa3.42□□□□□ -1.86
SCAMP1-201ENST00000320280 LMO2P25791 158 aa3.42□□□□□ -1.86
SCAMP1-201ENST00000320280 SDC4P31431 198 aa3.42□□□□□ -1.86
SCAMP1-201ENST00000320280 ATP5C1P36542 298 aaKnown RBP3.42□□□□□ -1.86
SCAMP1-201ENST00000320280 MAGEA1P43355 309 aa3.42□□□□□ -1.86
SCAMP1-201ENST00000320280 RAP1GAPP47736 663 aa3.42□□□□□ -1.86
SCAMP1-201ENST00000320280 MAPKAPK2P49137 400 aa3.42□□□□□ -1.86
SCAMP1-201ENST00000320280 CXCR3P49682 368 aa3.42□□□□□ -1.86
SCAMP1-201ENST00000320280 TKTL1P51854 596 aa3.42□□□□□ -1.86
SCAMP1-201ENST00000320280 TWF1Q12792 350 aa3.42□□□□□ -1.86
SCAMP1-201ENST00000320280 SMAD2Q15796 467 aaKnown RBP3.42□□□□□ -1.86
SCAMP1-201ENST00000320280 TAZQ16635 292 aa3.42□□□□□ -1.86
SCAMP1-201ENST00000320280 MGAT5BQ3V5L5 792 aa3.42□□□□□ -1.86
SCAMP1-201ENST00000320280 PTPN20Q4JDL3 420 aa3.42□□□□□ -1.86
SCAMP1-201ENST00000320280 DENND1BQ6P3S1 775 aa3.42□□□□□ -1.86
SCAMP1-201ENST00000320280 PRSS55Q6UWB4 352 aaPredicted RBP3.42□□□□□ -1.86
SCAMP1-201ENST00000320280 BHLHA9Q7RTU4 235 aa3.42□□□□□ -1.86
SCAMP1-201ENST00000320280 LRRTM3Q86VH5 581 aa3.42□□□□□ -1.86
SCAMP1-201ENST00000320280 CEP57Q86XR8 500 aa3.42□□□□□ -1.86
SCAMP1-201ENST00000320280 MAP7D3Q8IWC1 876 aa3.42□□□□□ -1.86
SCAMP1-201ENST00000320280 UBALD2Q8IYN6 164 aa3.42□□□□□ -1.86
SCAMP1-201ENST00000320280 SYNPOQ8N3V7 929 aa3.42□□□□□ -1.86
SCAMP1-201ENST00000320280 RNF139Q8WU17 664 aa3.42□□□□□ -1.86
SCAMP1-201ENST00000320280 ARNTL2Q8WYA1 636 aa3.42□□□□□ -1.86
SCAMP1-201ENST00000320280 RPGRIP1Q96KN7 1286 aa3.42□□□□□ -1.86
SCAMP1-201ENST00000320280 BTN2A3PQ96KV6 586 aa3.42□□□□□ -1.86
SCAMP1-201ENST00000320280 ARID3AQ99856 593 aa3.42□□□□□ -1.86
SCAMP1-201ENST00000320280 ZNF670Q9BS34 389 aa3.42□□□□□ -1.86
SCAMP1-201ENST00000320280 CXCL16Q9H2A7 254 aa3.42□□□□□ -1.86
SCAMP1-201ENST00000320280 TTYH1Q9H313 450 aaPredicted RBP3.42□□□□□ -1.86
SCAMP1-201ENST00000320280 DPEP3Q9H4B8 488 aa3.42□□□□□ -1.86
SCAMP1-201ENST00000320280 SYNCQ9H7C4 482 aa3.42□□□□□ -1.86
SCAMP1-201ENST00000320280 UBE2ZQ9H832 354 aaPredicted RBP3.42□□□□□ -1.86
SCAMP1-201ENST00000320280 ABI2Q9NYB9 513 aaPredicted RBP3.42□□□□□ -1.86
SCAMP1-201ENST00000320280 IGLV3-10A0A075B6K4 115 aa3.42□□□□□ -1.86
SCAMP1-201ENST00000320280 TYW5A2RUC4 315 aaKnown RBP3.42□□□□□ -1.86
SCAMP1-201ENST00000320280 GRID2IPA4D2P6 1211 aa3.42□□□□□ -1.86
SCAMP1-201ENST00000320280 ZNF840PA6NDX5 716 aa3.42□□□□□ -1.86
SCAMP1-201ENST00000320280 ZSCAN5CA6NGD5 496 aaPredicted RBP3.42□□□□□ -1.86
SCAMP1-201ENST00000320280 GFRA2O00451 464 aa3.42□□□□□ -1.86
SCAMP1-201ENST00000320280 HOXC11O43248 304 aaPredicted RBP3.42□□□□□ -1.86
SCAMP1-201ENST00000320280 LRRN2O75325 713 aa3.42□□□□□ -1.86
SCAMP1-201ENST00000320280 PTMAP06454 111 aaKnown RBP3.42□□□□□ -1.86
SCAMP1-201ENST00000320280 KRT3P12035 628 aa3.42□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms