RNA–Protein interactions for RNA: ENST00000316763.7

VRK3-201, Transcript of vaccinia related kinase 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene VRK3, Length 1,938 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-201ENST00000316763 TMCO2Q7Z6W1 182 aaPredicted RBP14.65□□□□□ -0.06
VRK3-201ENST00000316763 NPAS4Q8IUM7 802 aa14.65□□□□□ -0.06
VRK3-201ENST00000316763 CDKL3Q8IVW4 592 aaPredicted RBP14.65□□□□□ -0.06
VRK3-201ENST00000316763 SCUBE3Q8IX30 993 aa14.65□□□□□ -0.06
VRK3-201ENST00000316763 RSPH1Q8WYR4 309 aa14.65□□□□□ -0.06
VRK3-201ENST00000316763 TOP1MTQ969P6 601 aa14.65□□□□□ -0.06
VRK3-201ENST00000316763 KLHL29Q96CT2 875 aa14.65□□□□□ -0.06
VRK3-201ENST00000316763 SUSD3Q96L08 255 aa14.65□□□□□ -0.06
VRK3-201ENST00000316763 RMDN2Q96LZ7 410 aa14.65□□□□□ -0.06
VRK3-201ENST00000316763 LPIN3Q9BQK8 851 aa14.65□□□□□ -0.06
VRK3-201ENST00000316763 WDR83Q9BRX9 315 aaKnown RBP14.65□□□□□ -0.06
VRK3-201ENST00000316763 SNRNP25Q9BV90 132 aaKnown RBP14.65□□□□□ -0.06
VRK3-201ENST00000316763 RAB6CQ9H0N0 254 aa14.65□□□□□ -0.06
VRK3-201ENST00000316763 CYLDQ9NQC7 956 aa14.65□□□□□ -0.06
VRK3-201ENST00000316763 GPATCH2LQ9NWQ4 482 aa14.65□□□□□ -0.06
VRK3-201ENST00000316763 HEY1Q9Y5J3 304 aa14.65□□□□□ -0.06
VRK3-201ENST00000316763 TEX264Q9Y6I9 313 aa14.65□□□□□ -0.06
VRK3-201ENST00000316763 FNDC1Q4ZHG4 1894 aaPredicted RBP14.65□□□□□ -0.06
VRK3-201ENST00000316763 PAPSS1O43252 624 aaPredicted RBP14.64□□□□□ -0.07
VRK3-201ENST00000316763 HOXA2O43364 376 aa14.64□□□□□ -0.07
VRK3-201ENST00000316763 AMHP03971 560 aa14.64□□□□□ -0.07
VRK3-201ENST00000316763 ITGB1P05556 798 aa14.64□□□□□ -0.07
VRK3-201ENST00000316763 ALADP13716 330 aa14.64□□□□□ -0.07
VRK3-201ENST00000316763 PTPN1P18031 435 aaKnown RBP14.64□□□□□ -0.07
VRK3-201ENST00000316763 IL4RP24394 825 aa14.64□□□□□ -0.07
VRK3-201ENST00000316763 ACADSBP45954 432 aa14.64□□□□□ -0.07
VRK3-201ENST00000316763 BCAT1P54687 386 aa14.64□□□□□ -0.07
VRK3-201ENST00000316763 BST2Q10589 180 aaKnown RBP14.64□□□□□ -0.07
VRK3-201ENST00000316763 RIPK1Q13546 671 aa14.64□□□□□ -0.07
VRK3-201ENST00000316763 KIAA0319Q5VV43 1072 aa14.64□□□□□ -0.07
VRK3-201ENST00000316763 PQLC3Q8N755 202 aa14.64□□□□□ -0.07
VRK3-201ENST00000316763 ANKRD52Q8NB46 1076 aa14.64□□□□□ -0.07
VRK3-201ENST00000316763 ZNF75CPQ92670 426 aaPredicted RBP14.64□□□□□ -0.07
VRK3-201ENST00000316763 HNRNPABQ99729 332 aaKnown RBP14.64□□□□□ -0.07
VRK3-201ENST00000316763 PNPLA8Q9NP80 782 aa14.64□□□□□ -0.07
VRK3-201ENST00000316763 TXLNGQ9NUQ3 528 aa14.64□□□□□ -0.07
VRK3-201ENST00000316763 DDX43Q9NXZ2 648 aaKnown RBP14.64□□□□□ -0.07
VRK3-201ENST00000316763 DSEQ9UL01 958 aa14.64□□□□□ -0.07
VRK3-201ENST00000316763 F8W810 466 aa14.64□□□□□ -0.07
VRK3-201ENST00000316763 GSTA2P09210 222 aa14.64□□□□□ -0.07
VRK3-201ENST00000316763 CCDC130P13994 396 aa14.64□□□□□ -0.07
VRK3-201ENST00000316763 RBL1P28749 1068 aa14.64□□□□□ -0.07
VRK3-201ENST00000316763 BRCC3P46736 316 aa14.64□□□□□ -0.07
VRK3-201ENST00000316763 PAN2Q504Q3 1202 aaKnown RBP14.64□□□□□ -0.07
VRK3-201ENST00000316763 C9orf50Q5SZB4 431 aa14.64□□□□□ -0.07
VRK3-201ENST00000316763 PDE4DIPQ5VU43 2346 aa14.64□□□□□ -0.07
VRK3-201ENST00000316763 ARCQ7LC44 396 aa14.64□□□□□ -0.07
VRK3-201ENST00000316763 ABI1Q8IZP0 508 aa14.64□□□□□ -0.07
VRK3-201ENST00000316763 BANPQ8N9N5 519 aa14.64□□□□□ -0.07
VRK3-201ENST00000316763 PCDH19Q8TAB3 1148 aa14.64□□□□□ -0.07
VRK3-201ENST00000316763 MZB1Q8WU39 189 aa14.64□□□□□ -0.07
VRK3-201ENST00000316763 SLC44A1Q8WWI5 657 aa14.64□□□□□ -0.07
VRK3-201ENST00000316763 KHSRPQ92945 711 aaKnown RBP eCLIP14.64□□□□□ -0.07
VRK3-201ENST00000316763 GDF15Q99988 308 aa14.64□□□□□ -0.07
VRK3-201ENST00000316763 VPS11Q9H270 941 aa14.64□□□□□ -0.07
VRK3-201ENST00000316763 GRID1Q9ULK0 1009 aa14.64□□□□□ -0.07
VRK3-201ENST00000316763 TIMM13Q9Y5L4 95 aaPredicted RBP14.64□□□□□ -0.07
VRK3-201ENST00000316763 TCRBV9S1A1TA0A576 114 aa14.63□□□□□ -0.07
VRK3-201ENST00000316763 I3L4J1 428 aa14.63□□□□□ -0.07
VRK3-201ENST00000316763 TRDMT1O14717 391 aaKnown RBP14.63□□□□□ -0.07
VRK3-201ENST00000316763 ATP6V1G2O95670 118 aa14.63□□□□□ -0.07
VRK3-201ENST00000316763 TYMPP19971 482 aa14.63□□□□□ -0.07
VRK3-201ENST00000316763 ACAT1P24752 427 aaKnown RBP14.63□□□□□ -0.07
VRK3-201ENST00000316763 CYP2F1P24903 491 aa14.63□□□□□ -0.07
VRK3-201ENST00000316763 NR2C2P49116 596 aa14.63□□□□□ -0.07
VRK3-201ENST00000316763 RPL34P49207 117 aaKnown RBP14.63□□□□□ -0.07
VRK3-201ENST00000316763 GATMP50440 423 aa14.63□□□□□ -0.07
VRK3-201ENST00000316763 PPP6R3Q5H9R7 873 aaPredicted RBP14.63□□□□□ -0.07
VRK3-201ENST00000316763 FAM117BQ6P1L5 589 aa14.63□□□□□ -0.07
VRK3-201ENST00000316763 SLC26A9Q7LBE3 791 aa14.63□□□□□ -0.07
VRK3-201ENST00000316763 SLC2A14Q8TDB8 520 aa14.63□□□□□ -0.07
VRK3-201ENST00000316763 TCP10LQ8TDR4 215 aa14.63□□□□□ -0.07
VRK3-201ENST00000316763 HASPINQ8TF76 798 aa14.63□□□□□ -0.07
VRK3-201ENST00000316763 LRRC39Q96DD0 335 aa14.63□□□□□ -0.07
VRK3-201ENST00000316763 RTP3Q9BQQ7 232 aa14.63□□□□□ -0.07
VRK3-201ENST00000316763 ADAM33Q9BZ11 813 aa14.63□□□□□ -0.07
VRK3-201ENST00000316763 NRDE2Q9H7Z3 1164 aa14.63□□□□□ -0.07
VRK3-201ENST00000316763 CRTAC1Q9NQ79 661 aa14.63□□□□□ -0.07
VRK3-201ENST00000316763 ETNK2Q9NVF9 386 aa14.63□□□□□ -0.07
VRK3-201ENST00000316763 DNAJB4Q9UDY4 337 aa14.63□□□□□ -0.07
VRK3-201ENST00000316763 CDH9Q9ULB4 789 aa14.63□□□□□ -0.07
VRK3-201ENST00000316763 ARHGEF37A1IGU5 675 aa14.62□□□□□ -0.07
VRK3-201ENST00000316763 TROVE2P10155 538 aaKnown RBP eCLIP14.62□□□□□ -0.07
VRK3-201ENST00000316763 PCSK1P29120 753 aa14.62□□□□□ -0.07
VRK3-201ENST00000316763 TKTP29401 623 aaKnown RBP14.62□□□□□ -0.07
VRK3-201ENST00000316763 MAGEA6P43360 314 aa14.62□□□□□ -0.07
VRK3-201ENST00000316763 NRLP54845 237 aa14.62□□□□□ -0.07
VRK3-201ENST00000316763 HDAC4P56524 1084 aa14.62□□□□□ -0.07
VRK3-201ENST00000316763 MGAT5Q09328 741 aa14.62□□□□□ -0.07
VRK3-201ENST00000316763 SHHQ15465 462 aa14.62□□□□□ -0.07
VRK3-201ENST00000316763 DPYSL2Q16555 572 aa14.62□□□□□ -0.07
VRK3-201ENST00000316763 LGSNQ5TDP6 509 aa14.62□□□□□ -0.07
VRK3-201ENST00000316763 RASIP1Q5U651 963 aa14.62□□□□□ -0.07
VRK3-201ENST00000316763 PAQR9Q6ZVX9 377 aa14.62□□□□□ -0.07
VRK3-201ENST00000316763 IGDCC3Q8IVU1 814 aa14.62□□□□□ -0.07
VRK3-201ENST00000316763 MCUQ8NE86 351 aa14.62□□□□□ -0.07
VRK3-201ENST00000316763 ZNF398Q8TD17 642 aa14.62□□□□□ -0.07
VRK3-201ENST00000316763 CFAP36Q96G28 342 aa14.62□□□□□ -0.07
VRK3-201ENST00000316763 FAM193BQ96PV7 902 aaPredicted RBP14.62□□□□□ -0.07
VRK3-201ENST00000316763 LRRC37BQ96QE4 947 aa14.62□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms