RNA–Protein interactions for RNA: ENST00000314045.11

DDX54-202, Transcript of DEAD-box helicase 54, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene DDX54, Length 4,380 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX54-202ENST00000314045 CIPCQ9C0C6 399 aa14.06□□□□□ -0.16
DDX54-202ENST00000314045 NINJ2Q9NZG7 142 aa14.06□□□□□ -0.16
DDX54-202ENST00000314045 TLL2Q9Y6L7 1015 aa14.06□□□□□ -0.16
DDX54-202ENST00000314045 NRAPQ86VF7 1730 aa14.06□□□□□ -0.16
DDX54-202ENST00000314045 DDX60Q8IY21 1712 aaKnown RBP14.06□□□□□ -0.16
DDX54-202ENST00000314045 PAPPAQ13219 1627 aa14.05□□□□□ -0.16
DDX54-202ENST00000314045 ZWINTO95229 277 aa14.05□□□□□ -0.16
DDX54-202ENST00000314045 ASMTLO95671 621 aa14.05□□□□□ -0.16
DDX54-202ENST00000314045 UNGP13051 313 aaPredicted RBP14.05□□□□□ -0.16
DDX54-202ENST00000314045 CDH17Q12864 832 aa14.05□□□□□ -0.16
DDX54-202ENST00000314045 SLC26A9Q7LBE3 791 aa14.05□□□□□ -0.16
DDX54-202ENST00000314045 PRUNE1Q86TP1 453 aa14.05□□□□□ -0.16
DDX54-202ENST00000314045 ZC3H3Q8IXZ2 948 aaKnown RBP14.05□□□□□ -0.16
DDX54-202ENST00000314045 ZNF473Q8WTR7 871 aaKnown RBP14.05□□□□□ -0.16
DDX54-202ENST00000314045 FAM111AQ96PZ2 611 aa14.05□□□□□ -0.16
DDX54-202ENST00000314045 CREBZFQ9NS37 354 aa14.05□□□□□ -0.16
DDX54-202ENST00000314045 SUN2Q9UH99 717 aa14.05□□□□□ -0.16
DDX54-202ENST00000314045 ARL2BPQ9Y2Y0 163 aa14.05□□□□□ -0.16
DDX54-202ENST00000314045 CDY1Q9Y6F8 540 aa14.05□□□□□ -0.16
DDX54-202ENST00000314045 SCAMP3O14828 347 aaKnown RBP14.05□□□□□ -0.16
DDX54-202ENST00000314045 EOMESO95936 686 aa14.05□□□□□ -0.16
DDX54-202ENST00000314045 PPM1AP35813 382 aa14.05□□□□□ -0.16
DDX54-202ENST00000314045 GJA9P57773 515 aa14.05□□□□□ -0.16
DDX54-202ENST00000314045 RAP1GAP2Q684P5 730 aa14.05□□□□□ -0.16
DDX54-202ENST00000314045 VSTM1Q6UX27 236 aa14.05□□□□□ -0.16
DDX54-202ENST00000314045 FIZ1Q96SL8 496 aa14.05□□□□□ -0.16
DDX54-202ENST00000314045 WWP1Q9H0M0 922 aa14.05□□□□□ -0.16
DDX54-202ENST00000314045 CDHR5Q9HBB8 845 aa14.05□□□□□ -0.16
DDX54-202ENST00000314045 PCDH18Q9HCL0 1135 aa14.05□□□□□ -0.16
DDX54-202ENST00000314045 ADAM28Q9UKQ2 775 aa14.05□□□□□ -0.16
DDX54-202ENST00000314045 SPECC1L-ADORA2AF8WAN1 911 aa14.05□□□□□ -0.16
DDX54-202ENST00000314045 GYG2O15488 501 aa14.05□□□□□ -0.16
DDX54-202ENST00000314045 SASH3O75995 380 aa14.05□□□□□ -0.16
DDX54-202ENST00000314045 HDCP19113 662 aa14.05□□□□□ -0.16
DDX54-202ENST00000314045 CHRM3P20309 590 aa14.05□□□□□ -0.16
DDX54-202ENST00000314045 ADRA1BP35368 520 aa14.05□□□□□ -0.16
DDX54-202ENST00000314045 APLP1P51693 650 aa14.05□□□□□ -0.16
DDX54-202ENST00000314045 TLE2Q04725 743 aa14.05□□□□□ -0.16
DDX54-202ENST00000314045 MGAT5Q09328 741 aa14.05□□□□□ -0.16
DDX54-202ENST00000314045 KCTD19Q17RG1 926 aaPredicted RBP14.05□□□□□ -0.16
DDX54-202ENST00000314045 INTS6LQ5JSJ4 861 aaKnown RBP14.05□□□□□ -0.16
DDX54-202ENST00000314045 KDM7AQ6ZMT4 941 aa14.05□□□□□ -0.16
DDX54-202ENST00000314045 SERBP1Q8NC51 408 aaKnown RBP eCLIP14.05□□□□□ -0.16
DDX54-202ENST00000314045 PDZD8Q8NEN9 1154 aa14.05□□□□□ -0.16
DDX54-202ENST00000314045 TRIB2Q92519 343 aa14.05□□□□□ -0.16
DDX54-202ENST00000314045 SCUBE2Q9NQ36 999 aa14.05□□□□□ -0.16
DDX54-202ENST00000314045 IARS2Q9NSE4 1012 aaKnown RBP14.05□□□□□ -0.16
DDX54-202ENST00000314045 NR2E3Q9Y5X4 410 aa14.05□□□□□ -0.16
DDX54-202ENST00000314045 IGKV6D-21A0A0A0MT36 114 aa14.04□□□□□ -0.16
DDX54-202ENST00000314045 ARVCFO00192 962 aa14.04□□□□□ -0.16
DDX54-202ENST00000314045 EDIL3O43854 480 aa14.04□□□□□ -0.16
DDX54-202ENST00000314045 TLR5O60602 858 aa14.04□□□□□ -0.16
DDX54-202ENST00000314045 MYBL2P10244 700 aa14.04□□□□□ -0.16
DDX54-202ENST00000314045 DNAJC3Q13217 504 aa14.04□□□□□ -0.16
DDX54-202ENST00000314045 SOWAHAQ2M3V2 549 aa14.04□□□□□ -0.16
DDX54-202ENST00000314045 HABP4Q5JVS0 413 aaKnown RBP14.04□□□□□ -0.16
DDX54-202ENST00000314045 DUPD1Q68J44 220 aa14.04□□□□□ -0.16
DDX54-202ENST00000314045 ZCCHC9Q8N567 271 aaKnown RBP14.04□□□□□ -0.16
DDX54-202ENST00000314045 APBB2Q92870 758 aa14.04□□□□□ -0.16
DDX54-202ENST00000314045 PCED1BQ96HM7 432 aa14.04□□□□□ -0.16
DDX54-202ENST00000314045 SCLYQ96I15 445 aa14.04□□□□□ -0.16
DDX54-202ENST00000314045 MS4A4AQ96JQ5 239 aa14.04□□□□□ -0.16
DDX54-202ENST00000314045 ACBD6Q9BR61 282 aa14.04□□□□□ -0.16
DDX54-202ENST00000314045 ARHGAP39Q9C0H5 1083 aa14.04□□□□□ -0.16
DDX54-202ENST00000314045 TBC1D13Q9NVG8 400 aa14.04□□□□□ -0.16
DDX54-202ENST00000314045 SFMBT1Q9UHJ3 866 aa14.04□□□□□ -0.16
DDX54-202ENST00000314045 A0A0A0MRY4 1105 aa14.04□□□□□ -0.16
DDX54-202ENST00000314045 TIMM44O43615 452 aa14.04□□□□□ -0.16
DDX54-202ENST00000314045 MGAT1P26572 445 aa14.04□□□□□ -0.16
DDX54-202ENST00000314045 CTNNB1P35222 781 aa14.04□□□□□ -0.16
DDX54-202ENST00000314045 MPP3Q13368 585 aa14.04□□□□□ -0.16
DDX54-202ENST00000314045 CRELD2Q6UXH1 353 aaPredicted RBP14.04□□□□□ -0.16
DDX54-202ENST00000314045 RFX8Q6ZV50 586 aa14.04□□□□□ -0.16
DDX54-202ENST00000314045 STK32AQ8WU08 396 aa14.04□□□□□ -0.16
DDX54-202ENST00000314045 SGF29Q96ES7 293 aa14.04□□□□□ -0.16
DDX54-202ENST00000314045 SPATA13Q96N96 652 aa14.04□□□□□ -0.16
DDX54-202ENST00000314045 ETNK1Q9HBU6 452 aa14.04□□□□□ -0.16
DDX54-202ENST00000314045 SPG21Q9NZD8 308 aa14.04□□□□□ -0.16
DDX54-202ENST00000314045 GGT7Q9UJ14 662 aa14.04□□□□□ -0.16
DDX54-202ENST00000314045 CRLS1Q9UJA2 301 aa14.04□□□□□ -0.16
DDX54-202ENST00000314045 DNMT3LQ9UJW3 386 aa14.04□□□□□ -0.16
DDX54-202ENST00000314045 TRIM33Q9UPN9 1127 aa14.04□□□□□ -0.16
DDX54-202ENST00000314045 TNRC6CQ9HCJ0 1690 aaKnown RBP14.04□□□□□ -0.16
DDX54-202ENST00000314045 CFAP99D6REC4 459 aa14.04□□□□□ -0.16
DDX54-202ENST00000314045 FGF10O15520 208 aaPredicted RBP14.04□□□□□ -0.16
DDX54-202ENST00000314045 ANKRD20A2Q5SQ80 823 aa14.04□□□□□ -0.16
DDX54-202ENST00000314045 ANKRD20A1Q5TYW2 823 aa14.04□□□□□ -0.16
DDX54-202ENST00000314045 C17orf99Q6UX52 265 aa14.04□□□□□ -0.16
DDX54-202ENST00000314045 OTOP2Q7RTS6 562 aa14.04□□□□□ -0.16
DDX54-202ENST00000314045 STRA8Q7Z7C7 330 aa14.04□□□□□ -0.16
DDX54-202ENST00000314045 ECHDC2Q86YB7 292 aa14.04□□□□□ -0.16
DDX54-202ENST00000314045 RASGEF1CQ8N431 466 aa14.04□□□□□ -0.16
DDX54-202ENST00000314045 ALLCQ8N6M5 410 aa14.04□□□□□ -0.16
DDX54-202ENST00000314045 VCX3BQ9H321 246 aa14.04□□□□□ -0.16
DDX54-202ENST00000314045 NPHS2Q9NP85 383 aa14.04□□□□□ -0.16
DDX54-202ENST00000314045 USP15Q9Y4E8 981 aaPredicted RBP14.04□□□□□ -0.16
DDX54-202ENST00000314045 XYLBO75191 536 aa14.04□□□□□ -0.16
DDX54-202ENST00000314045 ITGAVP06756 1048 aa14.04□□□□□ -0.16
DDX54-202ENST00000314045 MYL2P10916 166 aa14.04□□□□□ -0.16
DDX54-202ENST00000314045 ZNF844Q08AG5 666 aa14.04□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 44.1 ms