RNA–Protein interactions for RNA: ENST00000313654.13

LAMA3-202, Transcript of laminin subunit alpha 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene LAMA3, Length 10,661 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LAMA3-202ENST00000313654 RGS19P49795 217 aa13.08□□□□□ -0.31
LAMA3-202ENST00000313654 GALK1P51570 392 aa13.08□□□□□ -0.31
LAMA3-202ENST00000313654 XIAPP98170 497 aa13.08□□□□□ -0.31
LAMA3-202ENST00000313654 MTMR1Q13613 665 aa13.08□□□□□ -0.31
LAMA3-202ENST00000313654 HKDC1Q2TB90 917 aa13.08□□□□□ -0.31
LAMA3-202ENST00000313654 FAM76BQ5HYJ3 339 aa13.08□□□□□ -0.31
LAMA3-202ENST00000313654 COMTD1Q86VU5 262 aa13.08□□□□□ -0.31
LAMA3-202ENST00000313654 OSCARQ8IYS5 282 aa13.08□□□□□ -0.31
LAMA3-202ENST00000313654 DMRTB1Q96MA1 342 aa13.08□□□□□ -0.31
LAMA3-202ENST00000313654 BCS1LQ9Y276 419 aa13.08□□□□□ -0.31
LAMA3-202ENST00000313654 USP12O75317 370 aa13.08□□□□□ -0.32
LAMA3-202ENST00000313654 UBA1P22314 1058 aaKnown RBP13.08□□□□□ -0.32
LAMA3-202ENST00000313654 USP7Q93009 1102 aa13.08□□□□□ -0.32
LAMA3-202ENST00000313654 TNKS2Q9H2K2 1166 aa13.08□□□□□ -0.32
LAMA3-202ENST00000313654 CATSPERBQ9H7T0 1116 aa13.08□□□□□ -0.32
LAMA3-202ENST00000313654 NADKO95544 446 aaPredicted RBP13.08□□□□□ -0.32
LAMA3-202ENST00000313654 C9P02748 559 aa13.08□□□□□ -0.32
LAMA3-202ENST00000313654 THRBP10828 461 aa13.08□□□□□ -0.32
LAMA3-202ENST00000313654 FDPSP14324 419 aaKnown RBP13.08□□□□□ -0.32
LAMA3-202ENST00000313654 OR52K2Q8NGK3 314 aa13.08□□□□□ -0.32
LAMA3-202ENST00000313654 RAPSNQ13702 412 aa13.08□□□□□ -0.32
LAMA3-202ENST00000313654 NT5DC4Q86YG4 428 aa13.08□□□□□ -0.32
LAMA3-202ENST00000313654 ADHFE1Q8IWW8 467 aa13.08□□□□□ -0.32
LAMA3-202ENST00000313654 PIH1D2Q8WWB5 315 aa13.08□□□□□ -0.32
LAMA3-202ENST00000313654 OXNAD1Q96HP4 312 aaPredicted RBP13.08□□□□□ -0.32
LAMA3-202ENST00000313654 ZNF471Q9BX82 626 aaPredicted RBP13.08□□□□□ -0.32
LAMA3-202ENST00000313654 STK33Q9BYT3 514 aa13.08□□□□□ -0.32
LAMA3-202ENST00000313654 COPRSQ9NQ92 184 aa13.08□□□□□ -0.32
LAMA3-202ENST00000313654 TRIM10Q9UDY6 481 aa13.08□□□□□ -0.32
LAMA3-202ENST00000313654 COG5Q9UP83 839 aa13.08□□□□□ -0.32
LAMA3-202ENST00000313654 DPYDQ12882 1025 aa13.08□□□□□ -0.32
LAMA3-202ENST00000313654 MED15Q96RN5 788 aa13.08□□□□□ -0.32
LAMA3-202ENST00000313654 IKZF3Q9UKT9 509 aa13.08□□□□□ -0.32
LAMA3-202ENST00000313654 RPS6KL1Q9Y6S9 549 aa13.08□□□□□ -0.32
LAMA3-202ENST00000313654 TMEM114B3SHH9 223 aa13.08□□□□□ -0.32
LAMA3-202ENST00000313654 PRR29P0C7W0 189 aa13.08□□□□□ -0.32
LAMA3-202ENST00000313654 NFKB1P19838 968 aa13.08□□□□□ -0.32
LAMA3-202ENST00000313654 ZNF790Q6PG37 636 aa13.08□□□□□ -0.32
LAMA3-202ENST00000313654 ZZZ3Q8IYH5 903 aa13.08□□□□□ -0.32
LAMA3-202ENST00000313654 ZNF276Q8N554 614 aa13.08□□□□□ -0.32
LAMA3-202ENST00000313654 FAM167AQ96KS9 214 aa13.08□□□□□ -0.32
LAMA3-202ENST00000313654 SLC38A2Q96QD8 506 aa13.08□□□□□ -0.32
LAMA3-202ENST00000313654 SCUBE2Q9NQ36 999 aa13.08□□□□□ -0.32
LAMA3-202ENST00000313654 CHST12Q9NRB3 414 aa13.08□□□□□ -0.32
LAMA3-202ENST00000313654 PTGFRNQ9P2B2 879 aa13.08□□□□□ -0.32
LAMA3-202ENST00000313654 NEURL1BA8MQ27 555 aa13.08□□□□□ -0.32
LAMA3-202ENST00000313654 PGRMC2O15173 223 aa13.08□□□□□ -0.32
LAMA3-202ENST00000313654 PMPCBO75439 489 aa13.08□□□□□ -0.32
LAMA3-202ENST00000313654 CYP2C8P10632 490 aa13.08□□□□□ -0.32
LAMA3-202ENST00000313654 TOMM20Q15388 145 aa13.08□□□□□ -0.32
LAMA3-202ENST00000313654 UBQLN1Q9UMX0 589 aaKnown RBP13.08□□□□□ -0.32
LAMA3-202ENST00000313654 SLC33A1O00400 549 aaPredicted RBP13.08□□□□□ -0.32
LAMA3-202ENST00000313654 PHC1P78364 1004 aa13.08□□□□□ -0.32
LAMA3-202ENST00000313654 CHRDL2Q6WN34 429 aa13.08□□□□□ -0.32
LAMA3-202ENST00000313654 INO80EQ8NBZ0 244 aaPredicted RBP13.08□□□□□ -0.32
LAMA3-202ENST00000313654 POF1BQ8WVV4 589 aa13.08□□□□□ -0.32
LAMA3-202ENST00000313654 PTPRHQ9HD43 1115 aa13.08□□□□□ -0.32
LAMA3-202ENST00000313654 ARHGAP28Q9P2N2 729 aa13.08□□□□□ -0.32
LAMA3-202ENST00000313654 PRG4Q92954 1404 aaPredicted RBP13.08□□□□□ -0.32
LAMA3-202ENST00000313654 BTBD19C9JJ37 291 aa13.07□□□□□ -0.32
LAMA3-202ENST00000313654 SERPINA1P01009 418 aa13.07□□□□□ -0.32
LAMA3-202ENST00000313654 FAM171BQ6P995 826 aa13.07□□□□□ -0.32
LAMA3-202ENST00000313654 DGKBQ9Y6T7 804 aa13.07□□□□□ -0.32
LAMA3-202ENST00000313654 OR2AT4A6NND4 320 aa13.07□□□□□ -0.32
LAMA3-202ENST00000313654 PTGER2P43116 358 aa13.07□□□□□ -0.32
LAMA3-202ENST00000313654 IL2P60568 153 aa13.07□□□□□ -0.32
LAMA3-202ENST00000313654 MRPS22P82650 360 aaKnown RBP13.07□□□□□ -0.32
LAMA3-202ENST00000313654 CARTPTQ16568 116 aa13.07□□□□□ -0.32
LAMA3-202ENST00000313654 CDHR2Q9BYE9 1310 aa13.07□□□□□ -0.32
LAMA3-202ENST00000313654 CYP4B1P13584 511 aa13.07□□□□□ -0.32
LAMA3-202ENST00000313654 SLC1A6P48664 564 aa13.07□□□□□ -0.32
LAMA3-202ENST00000313654 GGA2Q9UJY4 613 aa13.07□□□□□ -0.32
LAMA3-202ENST00000313654 ASCC3Q8N3C0 2202 aaKnown RBP13.07□□□□□ -0.32
LAMA3-202ENST00000313654 GSAPA4D1B5 854 aa13.07□□□□□ -0.32
LAMA3-202ENST00000313654 C2orf81A6NN90 581 aa13.07□□□□□ -0.32
LAMA3-202ENST00000313654 CCNT2O60583 730 aaKnown RBP13.07□□□□□ -0.32
LAMA3-202ENST00000313654 DHFRP00374 187 aa13.07□□□□□ -0.32
LAMA3-202ENST00000313654 HMBSP08397 361 aa13.07□□□□□ -0.32
LAMA3-202ENST00000313654 CD40LGP29965 261 aa13.07□□□□□ -0.32
LAMA3-202ENST00000313654 ADSSP30520 456 aa13.07□□□□□ -0.32
LAMA3-202ENST00000313654 PTPN5P54829 565 aa13.07□□□□□ -0.32
LAMA3-202ENST00000313654 DGLUCYQ7Z3D6 616 aa13.07□□□□□ -0.32
LAMA3-202ENST00000313654 LSM7Q9UK45 103 aaKnown RBP13.07□□□□□ -0.32
LAMA3-202ENST00000313654 MROH7-TTC4A0A0A0MT08 1334 aa13.07□□□□□ -0.32
LAMA3-202ENST00000313654 NCAPD2Q15021 1401 aa13.07□□□□□ -0.32
LAMA3-202ENST00000313654 TRIM64A6NGJ6 449 aa13.07□□□□□ -0.32
LAMA3-202ENST00000313654 DHX15O43143 795 aaKnown RBP13.07□□□□□ -0.32
LAMA3-202ENST00000313654 GLRA3O75311 464 aa13.07□□□□□ -0.32
LAMA3-202ENST00000313654 VCLP18206 1134 aa13.07□□□□□ -0.32
LAMA3-202ENST00000313654 ALDH1B1P30837 517 aa13.07□□□□□ -0.32
LAMA3-202ENST00000313654 MTAPQ13126 283 aa13.07□□□□□ -0.32
LAMA3-202ENST00000313654 PDK3Q15120 406 aa13.07□□□□□ -0.32
LAMA3-202ENST00000313654 AIFM3Q96NN9 605 aa13.07□□□□□ -0.32
LAMA3-202ENST00000313654 CROTQ9UKG9 612 aa13.07□□□□□ -0.32
LAMA3-202ENST00000313654 DDX52Q9Y2R4 599 aaKnown RBP eCLIP13.07□□□□□ -0.32
LAMA3-202ENST00000313654 MLLT6P55198 1093 aaPredicted RBP13.07□□□□□ -0.32
LAMA3-202ENST00000313654 CDH4P55283 916 aa13.07□□□□□ -0.32
LAMA3-202ENST00000313654 RPP38P78345 283 aaKnown RBP13.07□□□□□ -0.32
LAMA3-202ENST00000313654 DUOXA2Q1HG44 320 aa13.07□□□□□ -0.32
LAMA3-202ENST00000313654 USP17L2Q6R6M4 530 aa13.07□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms