RNA–Protein interactions for RNA: ENST00000312438.7

CLCF1-201, Transcript of cardiotrophin like cytokine factor 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CLCF1, Length 1,844 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCF1-201ENST00000312438 TMCO2Q7Z6W1 182 aaPredicted RBP17.27■□□□□ 0.36
CLCF1-201ENST00000312438 HTR3CQ8WXA8 447 aa17.27■□□□□ 0.36
CLCF1-201ENST00000312438 CENPHQ9H3R5 247 aa17.27■□□□□ 0.36
CLCF1-201ENST00000312438 SAYSD1Q9NPB0 183 aa17.27■□□□□ 0.36
CLCF1-201ENST00000312438 NINJ2Q9NZG7 142 aa17.27■□□□□ 0.36
CLCF1-201ENST00000312438 COL4A4P53420 1690 aaPredicted RBP17.27■□□□□ 0.35
CLCF1-201ENST00000312438 NLRC5Q86WI3 1866 aa17.26■□□□□ 0.35
CLCF1-201ENST00000312438 PPP1R12AO14974 1030 aaPredicted RBP17.26■□□□□ 0.35
CLCF1-201ENST00000312438 CHADO15335 359 aa17.26■□□□□ 0.35
CLCF1-201ENST00000312438 EIF3HO15372 352 aaKnown RBP eCLIP17.26■□□□□ 0.35
CLCF1-201ENST00000312438 ADAM12O43184 909 aa17.26■□□□□ 0.35
CLCF1-201ENST00000312438 LRIG2O94898 1065 aa17.26■□□□□ 0.35
CLCF1-201ENST00000312438 ACSL3O95573 720 aa17.26■□□□□ 0.35
CLCF1-201ENST00000312438 SLC2A3P11169 496 aa17.26■□□□□ 0.35
CLCF1-201ENST00000312438 EPHB2P29323 1055 aa17.26■□□□□ 0.35
CLCF1-201ENST00000312438 HTR7P34969 479 aa17.26■□□□□ 0.35
CLCF1-201ENST00000312438 DSG1Q02413 1049 aa17.26■□□□□ 0.35
CLCF1-201ENST00000312438 TAF10Q12962 218 aa17.26■□□□□ 0.35
CLCF1-201ENST00000312438 TERF2Q15554 542 aa17.26■□□□□ 0.35
CLCF1-201ENST00000312438 HIF1AQ16665 826 aa17.26■□□□□ 0.35
CLCF1-201ENST00000312438 C6orf118Q5T5N4 469 aa17.26■□□□□ 0.35
CLCF1-201ENST00000312438 ANKRD22Q5VYY1 191 aa17.26■□□□□ 0.35
CLCF1-201ENST00000312438 EXOC4Q96A65 974 aa17.26■□□□□ 0.35
CLCF1-201ENST00000312438 TTC25Q96NG3 672 aa17.26■□□□□ 0.35
CLCF1-201ENST00000312438 KLC2Q9H0B6 622 aa17.26■□□□□ 0.35
CLCF1-201ENST00000312438 IL23AQ9NPF7 189 aa17.26■□□□□ 0.35
CLCF1-201ENST00000312438 RAB6BQ9NRW1 208 aa17.26■□□□□ 0.35
CLCF1-201ENST00000312438 OLA1Q9NTK5 396 aaKnown RBP17.26■□□□□ 0.35
CLCF1-201ENST00000312438 SPG21Q9NZD8 308 aa17.26■□□□□ 0.35
CLCF1-201ENST00000312438 HSFX1Q9UBD0 423 aa17.26■□□□□ 0.35
CLCF1-201ENST00000312438 XPO7Q9UIA9 1087 aaKnown RBP17.26■□□□□ 0.35
CLCF1-201ENST00000312438 NUDT5Q9UKK9 219 aa17.26■□□□□ 0.35
CLCF1-201ENST00000312438 TLR6Q9Y2C9 796 aa17.26■□□□□ 0.35
CLCF1-201ENST00000312438 KCNU1A8MYU2 1149 aa17.26■□□□□ 0.35
CLCF1-201ENST00000312438 MSI1O43347 362 aaKnown RBP17.26■□□□□ 0.35
CLCF1-201ENST00000312438 RPL17P18621 184 aaKnown RBP17.26■□□□□ 0.35
CLCF1-201ENST00000312438 GLUD2P49448 558 aa17.26■□□□□ 0.35
CLCF1-201ENST00000312438 UBAP2Q5T6F2 1119 aaKnown RBP17.26■□□□□ 0.35
CLCF1-201ENST00000312438 PPP1R21Q6ZMI0 780 aa17.26■□□□□ 0.35
CLCF1-201ENST00000312438 TAB3Q8N5C8 712 aaPredicted RBP17.26■□□□□ 0.35
CLCF1-201ENST00000312438 ZNF461Q8TAF7 563 aa17.26■□□□□ 0.35
CLCF1-201ENST00000312438 UHMK1Q8TAS1 419 aaKnown RBP17.26■□□□□ 0.35
CLCF1-201ENST00000312438 CCDC110Q8TBZ0 833 aa17.26■□□□□ 0.35
CLCF1-201ENST00000312438 LRRN4Q8WUT4 740 aa17.26■□□□□ 0.35
CLCF1-201ENST00000312438 C9orf72Q96LT7 481 aa17.26■□□□□ 0.35
CLCF1-201ENST00000312438 LGMNQ99538 433 aa17.26■□□□□ 0.35
CLCF1-201ENST00000312438 CLSTN3Q9BQT9 956 aa17.26■□□□□ 0.35
CLCF1-201ENST00000312438 BRD8Q9H0E9 1235 aa17.26■□□□□ 0.35
CLCF1-201ENST00000312438 SIK2Q9H0K1 926 aa17.26■□□□□ 0.35
CLCF1-201ENST00000312438 AFF4Q9UHB7 1163 aaKnown RBP17.26■□□□□ 0.35
CLCF1-201ENST00000312438 MRPL42Q9Y6G3 142 aaKnown RBP17.26■□□□□ 0.35
CLCF1-201ENST00000312438 SLC38A8A6NNN8 435 aa17.25■□□□□ 0.35
CLCF1-201ENST00000312438 GOLGA8MH3BSY2 632 aa17.25■□□□□ 0.35
CLCF1-201ENST00000312438 C2CD2LO14523 706 aa17.25■□□□□ 0.35
CLCF1-201ENST00000312438 PAGE1O75459 146 aa17.25■□□□□ 0.35
CLCF1-201ENST00000312438 SERPINB6P35237 376 aa17.25■□□□□ 0.35
CLCF1-201ENST00000312438 PDIA2Q13087 525 aaKnown RBP17.25■□□□□ 0.35
CLCF1-201ENST00000312438 PRKD1Q15139 912 aaPredicted RBP17.25■□□□□ 0.35
CLCF1-201ENST00000312438 TPGS2Q68CL5 300 aa17.25■□□□□ 0.35
CLCF1-201ENST00000312438 DDX53Q86TM3 631 aaKnown RBP17.25■□□□□ 0.35
CLCF1-201ENST00000312438 PDIK1LQ8N165 341 aa17.25■□□□□ 0.35
CLCF1-201ENST00000312438 CCDC33Q8N5R6 958 aa17.25■□□□□ 0.35
CLCF1-201ENST00000312438 COLGALT1Q8NBJ5 622 aa17.25■□□□□ 0.35
CLCF1-201ENST00000312438 CCNYQ8ND76 341 aa17.25■□□□□ 0.35
CLCF1-201ENST00000312438 PGM2Q96G03 612 aa17.25■□□□□ 0.35
CLCF1-201ENST00000312438 C1orf74Q96LT6 269 aa17.25■□□□□ 0.35
CLCF1-201ENST00000312438 YME1L1Q96TA2 773 aa17.25■□□□□ 0.35
CLCF1-201ENST00000312438 CCDC77Q9BR77 488 aa17.25■□□□□ 0.35
CLCF1-201ENST00000312438 HERC2P3Q9BVR0 1158 aa17.25■□□□□ 0.35
CLCF1-201ENST00000312438 FRMD8Q9BZ67 464 aaPredicted RBP17.25■□□□□ 0.35
CLCF1-201ENST00000312438 PRDM12Q9H4Q4 367 aa17.25■□□□□ 0.35
CLCF1-201ENST00000312438 MTPAPQ9NVV4 582 aaKnown RBP eCLIP17.25■□□□□ 0.35
CLCF1-201ENST00000312438 BCCIPQ9P287 314 aaKnown RBP eCLIP17.25■□□□□ 0.35
CLCF1-201ENST00000312438 SNX10Q9Y5X0 201 aa17.25■□□□□ 0.35
CLCF1-201ENST00000312438 TCRBV7S3A2A0A539 114 aa17.24■□□□□ 0.35
CLCF1-201ENST00000312438 TLDC2A0PJX2 215 aa17.24■□□□□ 0.35
CLCF1-201ENST00000312438 RASGRF2O14827 1237 aa17.24■□□□□ 0.35
CLCF1-201ENST00000312438 STK10O94804 968 aaKnown RBP17.24■□□□□ 0.35
CLCF1-201ENST00000312438 ABLIM3O94929 683 aa17.24■□□□□ 0.35
CLCF1-201ENST00000312438 SRGAP2BP0DMP2 458 aa17.24■□□□□ 0.35
CLCF1-201ENST00000312438 MX2P20592 715 aa17.24■□□□□ 0.35
CLCF1-201ENST00000312438 AP1B1Q10567 949 aa17.24■□□□□ 0.35
CLCF1-201ENST00000312438 KCNJ11Q14654 390 aa17.24■□□□□ 0.35
CLCF1-201ENST00000312438 RASIP1Q5U651 963 aa17.24■□□□□ 0.35
CLCF1-201ENST00000312438 OTOP2Q7RTS6 562 aa17.24■□□□□ 0.35
CLCF1-201ENST00000312438 ZBED8Q8IZ13 594 aa17.24■□□□□ 0.35
CLCF1-201ENST00000312438 VPS52Q8N1B4 723 aa17.24■□□□□ 0.35
CLCF1-201ENST00000312438 GIPC2Q8TF65 315 aa17.24■□□□□ 0.35
CLCF1-201ENST00000312438 P2RY11Q96G91 374 aa17.24■□□□□ 0.35
CLCF1-201ENST00000312438 SLC39A13Q96H72 371 aa17.24■□□□□ 0.35
CLCF1-201ENST00000312438 FCRL2Q96LA5 508 aaPredicted RBP17.24■□□□□ 0.35
CLCF1-201ENST00000312438 TTLL2Q9BWV7 592 aa17.24■□□□□ 0.35
CLCF1-201ENST00000312438 ETNK1Q9HBU6 452 aa17.24■□□□□ 0.35
CLCF1-201ENST00000312438 PTPRDP23468 1912 aa17.24■□□□□ 0.35
CLCF1-201ENST00000312438 FNDC1Q4ZHG4 1894 aaPredicted RBP17.24■□□□□ 0.35
CLCF1-201ENST00000312438 A0A0A0MRY4 1105 aa17.24■□□□□ 0.35
CLCF1-201ENST00000312438 E7ESA3 106 aa17.24■□□□□ 0.35
CLCF1-201ENST00000312438 TMEM63AO94886 807 aa17.24■□□□□ 0.35
CLCF1-201ENST00000312438 ABHD2P08910 425 aa17.24■□□□□ 0.35
CLCF1-201ENST00000312438 ZDHHC11BP0C7U3 371 aa17.24■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms