RNA–Protein interactions for RNA: ENST00000310441.11

HCFC1-201, Transcript of host cell factor C1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene HCFC1, Length 8,869 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC1-201ENST00000310441 MYL6P60660 151 aa15.83■□□□□ 0.13
HCFC1-201ENST00000310441 TMEM143Q96AN5 459 aa15.83■□□□□ 0.13
HCFC1-201ENST00000310441 CAPN10Q9HC96 672 aa15.83■□□□□ 0.13
HCFC1-201ENST00000310441 GPAMQ9HCL2 828 aa15.83■□□□□ 0.13
HCFC1-201ENST00000310441 NPHP4O75161 1426 aaPredicted RBP15.83■□□□□ 0.13
HCFC1-201ENST00000310441 MED14O60244 1454 aa15.83■□□□□ 0.12
HCFC1-201ENST00000310441 GPR182O15218 404 aa15.83■□□□□ 0.12
HCFC1-201ENST00000310441 NMT2O60551 498 aa15.83■□□□□ 0.12
HCFC1-201ENST00000310441 PAX3P23760 479 aa15.83■□□□□ 0.12
HCFC1-201ENST00000310441 FAUP35544 74 aaKnown RBP15.83■□□□□ 0.12
HCFC1-201ENST00000310441 RFX3P48380 749 aa15.83■□□□□ 0.12
HCFC1-201ENST00000310441 SLC1A6P48664 564 aa15.83■□□□□ 0.12
HCFC1-201ENST00000310441 DDX39BQ13838 428 aaKnown RBP15.83■□□□□ 0.12
HCFC1-201ENST00000310441 FAM187BQ17R55 369 aa15.83■□□□□ 0.12
HCFC1-201ENST00000310441 REEP1Q9H902 201 aa15.83■□□□□ 0.12
HCFC1-201ENST00000310441 UBQLN1Q9UMX0 589 aaKnown RBP15.83■□□□□ 0.12
HCFC1-201ENST00000310441 LRRC7Q96NW7 1537 aa15.83■□□□□ 0.12
HCFC1-201ENST00000310441 SNAP91O60641 907 aa15.83■□□□□ 0.12
HCFC1-201ENST00000310441 ZNF543Q08ER8 600 aa15.83■□□□□ 0.12
HCFC1-201ENST00000310441 BTN2A1Q7KYR7 527 aa15.83■□□□□ 0.12
HCFC1-201ENST00000310441 ARHGEF19Q8IW93 802 aa15.83■□□□□ 0.12
HCFC1-201ENST00000310441 TNPO3Q9Y5L0 923 aaKnown RBP15.83■□□□□ 0.12
HCFC1-201ENST00000310441 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP15.83■□□□□ 0.128e-7■■■□□ 18.5
HCFC1-201ENST00000310441 A0A087WZ62 844 aa15.83■□□□□ 0.12
HCFC1-201ENST00000310441 A0A0X1KG70 313 aa15.83■□□□□ 0.12
HCFC1-201ENST00000310441 KCNMA1Q12791 1236 aa15.83■□□□□ 0.12
HCFC1-201ENST00000310441 MSLNQ13421 630 aaPredicted RBP15.83■□□□□ 0.12
HCFC1-201ENST00000310441 OR7A2PQ8NGA2 310 aa15.83■□□□□ 0.12
HCFC1-201ENST00000310441 TMEM159Q96B96 161 aa15.83■□□□□ 0.12
HCFC1-201ENST00000310441 PANX3Q96QZ0 392 aa15.83■□□□□ 0.12
HCFC1-201ENST00000310441 SMAD5Q99717 465 aaKnown RBP15.83■□□□□ 0.12
HCFC1-201ENST00000310441 SGTAO43765 313 aa15.83■□□□□ 0.12
HCFC1-201ENST00000310441 GYPCP04921 128 aa15.83■□□□□ 0.12
HCFC1-201ENST00000310441 ALOX12P18054 663 aa15.83■□□□□ 0.12
HCFC1-201ENST00000310441 SOX11P35716 441 aa15.83■□□□□ 0.12
HCFC1-201ENST00000310441 B3GNT6Q6ZMB0 384 aa15.83■□□□□ 0.12
HCFC1-201ENST00000310441 OR56A4Q8NGH8 313 aa15.83■□□□□ 0.12
HCFC1-201ENST00000310441 OTUD5Q96G74 571 aa15.83■□□□□ 0.12
HCFC1-201ENST00000310441 RGS14O43566 566 aa15.83■□□□□ 0.12
HCFC1-201ENST00000310441 S100A1P23297 94 aa15.83■□□□□ 0.12
HCFC1-201ENST00000310441 KLHDC7AQ5VTJ3 777 aa15.83■□□□□ 0.12
HCFC1-201ENST00000310441 MRPS31Q92665 395 aaKnown RBP15.83■□□□□ 0.12
HCFC1-201ENST00000310441 PHF11Q9UIL8 331 aa15.83■□□□□ 0.12
HCFC1-201ENST00000310441 TSPAN9O75954 239 aa15.82■□□□□ 0.12
HCFC1-201ENST00000310441 GHRP10912 638 aa15.82■□□□□ 0.12
HCFC1-201ENST00000310441 ATP1A4Q13733 1029 aa15.82■□□□□ 0.12
HCFC1-201ENST00000310441 FBXO36Q8NEA4 188 aa15.82■□□□□ 0.12
HCFC1-201ENST00000310441 KBTBD8Q8NFY9 601 aa15.82■□□□□ 0.12
HCFC1-201ENST00000310441 FBXO32Q969P5 355 aa15.82■□□□□ 0.12
HCFC1-201ENST00000310441 PRDM8Q9NQV8 689 aa15.82■□□□□ 0.12
HCFC1-201ENST00000310441 POLRMTO00411 1230 aaKnown RBP15.82■□□□□ 0.12
HCFC1-201ENST00000310441 S100A6P06703 90 aa15.82■□□□□ 0.12
HCFC1-201ENST00000310441 GSTM5P46439 218 aa15.82■□□□□ 0.12
HCFC1-201ENST00000310441 CPA2P48052 419 aa15.82■□□□□ 0.12
HCFC1-201ENST00000310441 MMP14P50281 582 aa15.82■□□□□ 0.12
HCFC1-201ENST00000310441 IL2P60568 153 aa15.82■□□□□ 0.12
HCFC1-201ENST00000310441 PPIL2Q13356 520 aa15.82■□□□□ 0.12
HCFC1-201ENST00000310441 AGKQ53H12 422 aa15.82■□□□□ 0.12
HCFC1-201ENST00000310441 MTDHQ86UE4 582 aaKnown RBP15.82■□□□□ 0.12
HCFC1-201ENST00000310441 DEPDC4Q8N2C3 294 aa15.82■□□□□ 0.12
HCFC1-201ENST00000310441 PCDHGC5Q9Y5F6 944 aa15.82■□□□□ 0.12
HCFC1-201ENST00000310441 CCDC88CQ9P219 2028 aa15.82■□□□□ 0.12
HCFC1-201ENST00000310441 SERPINE1P05121 402 aa15.82■□□□□ 0.12
HCFC1-201ENST00000310441 NPY2RP49146 381 aa15.82■□□□□ 0.12
HCFC1-201ENST00000310441 BICRALQ6AI39 1079 aa15.82■□□□□ 0.12
HCFC1-201ENST00000310441 PAFAH2Q99487 392 aa15.82■□□□□ 0.12
HCFC1-201ENST00000310441 M0QYT0 321 aa15.82■□□□□ 0.12
HCFC1-201ENST00000310441 SLC34A1Q06495 639 aa15.82■□□□□ 0.12
HCFC1-201ENST00000310441 TAF8Q7Z7C8 310 aa15.82■□□□□ 0.12
HCFC1-201ENST00000310441 ROGDIQ9GZN7 287 aa15.82■□□□□ 0.12
HCFC1-201ENST00000310441 LINC00854A0A1B0GVQ3 168 aa15.82■□□□□ 0.12
HCFC1-201ENST00000310441 PRKAR1AP10644 381 aa15.82■□□□□ 0.12
HCFC1-201ENST00000310441 MTF1Q14872 753 aa15.82■□□□□ 0.12
HCFC1-201ENST00000310441 EFCAB12Q6NXP0 572 aa15.82■□□□□ 0.12
HCFC1-201ENST00000310441 CAVIN3Q969G5 261 aa15.82■□□□□ 0.12
HCFC1-201ENST00000310441 TPD52L3Q96J77 140 aa15.82■□□□□ 0.12
HCFC1-201ENST00000310441 BTBD10Q9BSF8 475 aa15.82■□□□□ 0.12
HCFC1-201ENST00000310441 MTMR4Q9NYA4 1195 aa15.82■□□□□ 0.12
HCFC1-201ENST00000310441 TAS2R13Q9NYV9 303 aa15.82■□□□□ 0.12
HCFC1-201ENST00000310441 CNOT7Q9UIV1 285 aaKnown RBP15.82■□□□□ 0.12
HCFC1-201ENST00000310441 HMBSP08397 361 aa15.82■□□□□ 0.12
HCFC1-201ENST00000310441 OR1G1P47890 313 aa15.82■□□□□ 0.12
HCFC1-201ENST00000310441 BIKQ13323 160 aa15.82■□□□□ 0.12
HCFC1-201ENST00000310441 TTC23Q5W5X9 447 aa15.82■□□□□ 0.12
HCFC1-201ENST00000310441 RPTNQ6XPR3 784 aa15.82■□□□□ 0.12
HCFC1-201ENST00000310441 DSG4Q86SJ6 1040 aa15.82■□□□□ 0.12
HCFC1-201ENST00000310441 FIG4Q92562 907 aa15.82■□□□□ 0.12
HCFC1-201ENST00000310441 FAM210AQ96ND0 272 aa15.82■□□□□ 0.12
HCFC1-201ENST00000310441 DPY30Q9C005 99 aa15.82■□□□□ 0.12
HCFC1-201ENST00000310441 AGPAT5Q9NUQ2 364 aa15.82■□□□□ 0.12
HCFC1-201ENST00000310441 CLN6Q9NWW5 311 aa15.82■□□□□ 0.12
HCFC1-201ENST00000310441 PSME2Q9UL46 239 aa15.82■□□□□ 0.12
HCFC1-201ENST00000310441 INPP4BO15327 924 aa15.82■□□□□ 0.12
HCFC1-201ENST00000310441 LCA5LO95447 670 aa15.82■□□□□ 0.12
HCFC1-201ENST00000310441 C6orf222P0C671 652 aaPredicted RBP15.82■□□□□ 0.12
HCFC1-201ENST00000310441 CPA3P15088 417 aa15.82■□□□□ 0.12
HCFC1-201ENST00000310441 CAPGP40121 348 aa15.82■□□□□ 0.12
HCFC1-201ENST00000310441 CCZ1BP86790 482 aa15.82■□□□□ 0.12
HCFC1-201ENST00000310441 CCZ1P86791 482 aaPredicted RBP15.82■□□□□ 0.12
HCFC1-201ENST00000310441 CAMKK1Q8N5S9 505 aa15.82■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms