RNA–Protein interactions for RNA: ENST00000309964.8

CLOCK-201, Transcript of clock circadian regulator, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLOCK, Length 10,304 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLOCK-201ENST00000309964 PPP1R16BQ96T49 567 aa3.27□□□□□ -1.89
CLOCK-201ENST00000309964 SYT15Q9BQS2 421 aa3.27□□□□□ -1.89
CLOCK-201ENST00000309964 SLC13A1Q9BZW2 595 aa3.27□□□□□ -1.89
CLOCK-201ENST00000309964 CISHQ9NSE2 258 aa3.27□□□□□ -1.89
CLOCK-201ENST00000309964 COMMD8Q9NX08 183 aa3.27□□□□□ -1.89
CLOCK-201ENST00000309964 CYP39A1Q9NYL5 469 aa3.27□□□□□ -1.89
CLOCK-201ENST00000309964 ADAM30Q9UKF2 790 aa3.27□□□□□ -1.89
CLOCK-201ENST00000309964 VANGL2Q9ULK5 521 aa3.27□□□□□ -1.89
CLOCK-201ENST00000309964 RNF112Q9ULX5 631 aa3.27□□□□□ -1.89
CLOCK-201ENST00000309964 MAFFQ9ULX9 164 aa3.27□□□□□ -1.89
CLOCK-201ENST00000309964 SHOC2Q9UQ13 582 aa3.27□□□□□ -1.89
CLOCK-201ENST00000309964 SOWAHDA6NJG2 315 aa3.26□□□□□ -1.89
CLOCK-201ENST00000309964 SRP72O76094 671 aaKnown RBP3.26□□□□□ -1.89
CLOCK-201ENST00000309964 NDUFS1P28331 727 aa3.26□□□□□ -1.89
CLOCK-201ENST00000309964 HPCAL1P37235 193 aa3.26□□□□□ -1.89
CLOCK-201ENST00000309964 CLNS1AP54105 237 aaKnown RBP3.26□□□□□ -1.89
CLOCK-201ENST00000309964 PNLIPRP1P54315 467 aa3.26□□□□□ -1.89
CLOCK-201ENST00000309964 RAD23AP54725 363 aa3.26□□□□□ -1.89
CLOCK-201ENST00000309964 SMIM11AP58511 58 aa3.26□□□□□ -1.89
CLOCK-201ENST00000309964 MRPS6P82932 125 aaKnown RBP3.26□□□□□ -1.89
CLOCK-201ENST00000309964 DMC1Q14565 340 aa3.26□□□□□ -1.89
CLOCK-201ENST00000309964 GRAMD4Q6IC98 578 aa3.26□□□□□ -1.89
CLOCK-201ENST00000309964 CATSPERGQ6ZRH7 1159 aa3.26□□□□□ -1.89
CLOCK-201ENST00000309964 CLEC4FQ8N1N0 589 aa3.26□□□□□ -1.89
CLOCK-201ENST00000309964 DPP10Q8N608 796 aa3.26□□□□□ -1.89
CLOCK-201ENST00000309964 HJURPQ8NCD3 748 aaPredicted RBP3.26□□□□□ -1.89
CLOCK-201ENST00000309964 SLC5A5Q92911 643 aa3.26□□□□□ -1.89
CLOCK-201ENST00000309964 TGS1Q96RS0 853 aaKnown RBP3.26□□□□□ -1.89
CLOCK-201ENST00000309964 KLHL4Q9C0H6 718 aa3.26□□□□□ -1.89
CLOCK-201ENST00000309964 PCBD2Q9H0N5 130 aa3.26□□□□□ -1.89
CLOCK-201ENST00000309964 PIGBOS1A0A0B4J2F0 54 aa3.26□□□□□ -1.89
CLOCK-201ENST00000309964 H3BUI4 141 aa3.26□□□□□ -1.89
CLOCK-201ENST00000309964 ARHGEF9O43307 516 aa3.26□□□□□ -1.89
CLOCK-201ENST00000309964 DEAF1O75398 565 aaPredicted RBP3.26□□□□□ -1.89
CLOCK-201ENST00000309964 DNTTP04053 509 aa3.26□□□□□ -1.89
CLOCK-201ENST00000309964 ASLP04424 464 aa3.26□□□□□ -1.89
CLOCK-201ENST00000309964 GJB1P08034 283 aa3.26□□□□□ -1.89
CLOCK-201ENST00000309964 CXCR5P32302 372 aa3.26□□□□□ -1.89
CLOCK-201ENST00000309964 RARRES1P49788 294 aa3.26□□□□□ -1.89
CLOCK-201ENST00000309964 LIG3P49916 1009 aa3.26□□□□□ -1.89
CLOCK-201ENST00000309964 ACTR3P61158 418 aa3.26□□□□□ -1.89
CLOCK-201ENST00000309964 STX3Q13277 289 aa3.26□□□□□ -1.89
CLOCK-201ENST00000309964 MSLNQ13421 630 aaPredicted RBP3.26□□□□□ -1.89
CLOCK-201ENST00000309964 GRAMD1BQ3KR37 738 aa3.26□□□□□ -1.89
CLOCK-201ENST00000309964 TBC1D25Q3MII6 688 aa3.26□□□□□ -1.89
CLOCK-201ENST00000309964 ATP13A5Q4VNC0 1218 aa3.26□□□□□ -1.89
CLOCK-201ENST00000309964 ARMC3Q5W041 872 aa3.26□□□□□ -1.89
CLOCK-201ENST00000309964 PDPK2PQ6A1A2 396 aa3.26□□□□□ -1.89
CLOCK-201ENST00000309964 RBM43Q6ZSC3 357 aaKnown RBP3.26□□□□□ -1.89
CLOCK-201ENST00000309964 MAB21L3Q8N8X9 362 aa3.26□□□□□ -1.89
CLOCK-201ENST00000309964 ST13P5Q8NFI4 369 aaPredicted RBP3.26□□□□□ -1.89
CLOCK-201ENST00000309964 PTCD2Q8WV60 388 aaKnown RBP3.26□□□□□ -1.89
CLOCK-201ENST00000309964 FUBP3Q96I24 572 aaKnown RBP eCLIP3.26□□□□□ -1.89
CLOCK-201ENST00000309964 BDH2Q9BUT1 245 aa3.26□□□□□ -1.89
CLOCK-201ENST00000309964 SLC2A11Q9BYW1 496 aa3.26□□□□□ -1.89
CLOCK-201ENST00000309964 RACGAP1Q9H0H5 632 aa3.26□□□□□ -1.89
CLOCK-201ENST00000309964 RIBC2Q9H4K1 309 aa3.26□□□□□ -1.89
CLOCK-201ENST00000309964 ZSCAN32Q9NX65 697 aa3.26□□□□□ -1.89
CLOCK-201ENST00000309964 KIAA1522Q9P206 1035 aaPredicted RBP3.26□□□□□ -1.89
CLOCK-201ENST00000309964 RCOR3Q9P2K3 495 aaPredicted RBP3.26□□□□□ -1.89
CLOCK-201ENST00000309964 INSL6Q9Y581 213 aa3.26□□□□□ -1.89
CLOCK-201ENST00000309964 BCL9LQ86UU0 1499 aa3.26□□□□□ -1.89
CLOCK-201ENST00000309964 F5P12259 2224 aa3.26□□□□□ -1.89
CLOCK-201ENST00000309964 NCOR1O75376 2440 aa3.26□□□□□ -1.89
CLOCK-201ENST00000309964 CYP3A7-CYP3A51PA0A087WV96 503 aa3.26□□□□□ -1.89
CLOCK-201ENST00000309964 FAM220BPB1ANY3 271 aa3.26□□□□□ -1.89
CLOCK-201ENST00000309964 GLUD1P00367 558 aa3.26□□□□□ -1.89
CLOCK-201ENST00000309964 PSMC3P17980 439 aa3.26□□□□□ -1.89
CLOCK-201ENST00000309964 CYP3A7P24462 503 aa3.26□□□□□ -1.89
CLOCK-201ENST00000309964 CTNNB1P35222 781 aa3.26□□□□□ -1.89
CLOCK-201ENST00000309964 SRSF11Q05519 484 aaKnown RBP3.26□□□□□ -1.89
CLOCK-201ENST00000309964 XRCC4Q13426 336 aa3.26□□□□□ -1.89
CLOCK-201ENST00000309964 USP39Q53GS9 565 aaKnown RBP3.26□□□□□ -1.89
CLOCK-201ENST00000309964 PACS1Q6VY07 963 aa3.26□□□□□ -1.89
CLOCK-201ENST00000309964 GPT2Q8TD30 523 aa3.26□□□□□ -1.89
CLOCK-201ENST00000309964 ACTRT1Q8TDG2 376 aa3.26□□□□□ -1.89
CLOCK-201ENST00000309964 RASSF5Q8WWW0 418 aa3.26□□□□□ -1.89
CLOCK-201ENST00000309964 ADI1Q9BV57 179 aa3.26□□□□□ -1.89
CLOCK-201ENST00000309964 NMRAL1Q9HBL8 299 aa3.26□□□□□ -1.89
CLOCK-201ENST00000309964 NMRK2Q9NPI5 230 aa3.26□□□□□ -1.89
CLOCK-201ENST00000309964 BATF3Q9NR55 127 aa3.26□□□□□ -1.89
CLOCK-201ENST00000309964 PAPOLBQ9NRJ5 636 aaKnown RBP3.26□□□□□ -1.89
CLOCK-201ENST00000309964 GNPTGQ9UJJ9 305 aa3.26□□□□□ -1.89
CLOCK-201ENST00000309964 SUFUQ9UMX1 484 aa3.26□□□□□ -1.89
CLOCK-201ENST00000309964 ACOT9Q9Y305 439 aa3.26□□□□□ -1.89
CLOCK-201ENST00000309964 HEBP2Q9Y5Z4 205 aa3.26□□□□□ -1.89
CLOCK-201ENST00000309964 ALG6Q9Y672 507 aa3.26□□□□□ -1.89
CLOCK-201ENST00000309964 KCNE2Q9Y6J6 123 aa3.26□□□□□ -1.89
CLOCK-201ENST00000309964 DDHD2O94830 711 aa3.26□□□□□ -1.89
CLOCK-201ENST00000309964 SEMA3DO95025 777 aa3.26□□□□□ -1.89
CLOCK-201ENST00000309964 PAICSP22234 425 aaKnown RBP3.26□□□□□ -1.89
CLOCK-201ENST00000309964 POLD2P49005 469 aa3.26□□□□□ -1.89
CLOCK-201ENST00000309964 ST13P50502 369 aaKnown RBP3.26□□□□□ -1.89
CLOCK-201ENST00000309964 FAM189A2Q15884 450 aa3.26□□□□□ -1.89
CLOCK-201ENST00000309964 POTEHQ6S545 545 aa3.26□□□□□ -1.89
CLOCK-201ENST00000309964 BRSK2Q8IWQ3 736 aa3.26□□□□□ -1.89
CLOCK-201ENST00000309964 ZFPM1Q8IX07 1006 aa3.26□□□□□ -1.89
CLOCK-201ENST00000309964 TCAIMQ8N3R3 496 aa3.26□□□□□ -1.89
CLOCK-201ENST00000309964 SNX31Q8N9S9 440 aa3.26□□□□□ -1.89
CLOCK-201ENST00000309964 SERBP1Q8NC51 408 aaKnown RBP eCLIP3.26□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms