RNA–Protein interactions for RNA: ENST00000309934.4

SEC22A-201, Transcript of SEC22 homolog A, vesicle trafficking protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SEC22A, Length 4,228 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC22A-201ENST00000309934 KCNK9Q9NPC2 374 aa6.18□□□□□ -1.42
SEC22A-201ENST00000309934 MYH9P35579 1960 aaKnown RBP6.18□□□□□ -1.42
SEC22A-201ENST00000309934 PRRG1O14668 218 aa6.18□□□□□ -1.42
SEC22A-201ENST00000309934 DDX3YO15523 660 aaKnown RBP6.18□□□□□ -1.42
SEC22A-201ENST00000309934 ELNP15502 786 aa6.18□□□□□ -1.42
SEC22A-201ENST00000309934 DDX5P17844 614 aaKnown RBP6.18□□□□□ -1.42
SEC22A-201ENST00000309934 YWHAGP61981 247 aaKnown RBP eCLIP6.18□□□□□ -1.42
SEC22A-201ENST00000309934 VSNL1P62760 191 aa6.18□□□□□ -1.42
SEC22A-201ENST00000309934 C1orf220Q5T0J3 134 aa6.18□□□□□ -1.42
SEC22A-201ENST00000309934 WSCD1Q658N2 575 aa6.18□□□□□ -1.42
SEC22A-201ENST00000309934 CASC4Q6P4E1 433 aa6.18□□□□□ -1.42
SEC22A-201ENST00000309934 SCG3Q8WXD2 468 aaKnown RBP6.18□□□□□ -1.42
SEC22A-201ENST00000309934 KAT5Q92993 513 aa6.18□□□□□ -1.42
SEC22A-201ENST00000309934 C8orf48Q96LL4 319 aa6.18□□□□□ -1.42
SEC22A-201ENST00000309934 PCDHB18PQ96TA0 734 aa6.18□□□□□ -1.42
SEC22A-201ENST00000309934 YME1L1Q96TA2 773 aa6.18□□□□□ -1.42
SEC22A-201ENST00000309934 ZNF304Q9HCX3 659 aa6.18□□□□□ -1.42
SEC22A-201ENST00000309934 TBC1D13Q9NVG8 400 aa6.18□□□□□ -1.42
SEC22A-201ENST00000309934 SPG21Q9NZD8 308 aa6.18□□□□□ -1.42
SEC22A-201ENST00000309934 EMC3Q9P0I2 261 aa6.18□□□□□ -1.42
SEC22A-201ENST00000309934 ATPIF1Q9UII2 106 aa6.18□□□□□ -1.42
SEC22A-201ENST00000309934 PLAAQ9Y263 795 aa6.18□□□□□ -1.42
SEC22A-201ENST00000309934 ATP11BQ9Y2G3 1177 aa6.18□□□□□ -1.42
SEC22A-201ENST00000309934 ZSCAN5CA6NGD5 496 aaPredicted RBP6.18□□□□□ -1.42
SEC22A-201ENST00000309934 ZBBXA8MT70 800 aa6.18□□□□□ -1.42
SEC22A-201ENST00000309934 FAM155AB1AL88 458 aaPredicted RBP6.18□□□□□ -1.42
SEC22A-201ENST00000309934 E5RJQ4 531 aa6.18□□□□□ -1.42
SEC22A-201ENST00000309934 RNF225M0QZC1 329 aaPredicted RBP6.18□□□□□ -1.42
SEC22A-201ENST00000309934 ZNF263O14978 683 aa6.18□□□□□ -1.42
SEC22A-201ENST00000309934 CHADO15335 359 aa6.18□□□□□ -1.42
SEC22A-201ENST00000309934 TTI1O43156 1089 aa6.18□□□□□ -1.42
SEC22A-201ENST00000309934 TIMM44O43615 452 aa6.18□□□□□ -1.42
SEC22A-201ENST00000309934 ADAMTS4O75173 837 aa6.18□□□□□ -1.42
SEC22A-201ENST00000309934 XYLBO75191 536 aa6.18□□□□□ -1.42
SEC22A-201ENST00000309934 NNMTP40261 264 aa6.18□□□□□ -1.42
SEC22A-201ENST00000309934 MAPK8P45983 427 aa6.18□□□□□ -1.42
SEC22A-201ENST00000309934 ARPP19P56211 112 aa6.18□□□□□ -1.42
SEC22A-201ENST00000309934 PDE1BQ01064 536 aa6.18□□□□□ -1.42
SEC22A-201ENST00000309934 MGAT5BQ3V5L5 792 aa6.18□□□□□ -1.42
SEC22A-201ENST00000309934 CYP4A22Q5TCH4 519 aa6.18□□□□□ -1.42
SEC22A-201ENST00000309934 SH3GL2Q99962 352 aa6.18□□□□□ -1.42
SEC22A-201ENST00000309934 TTPALQ9BTX7 342 aa6.18□□□□□ -1.42
SEC22A-201ENST00000309934 XYLT2Q9H1B5 865 aa6.18□□□□□ -1.42
SEC22A-201ENST00000309934 DDIT4Q9NX09 232 aa6.18□□□□□ -1.42
SEC22A-201ENST00000309934 ZFATQ9P243 1243 aa6.18□□□□□ -1.42
SEC22A-201ENST00000309934 HBS1LQ9Y450 684 aaKnown RBP6.18□□□□□ -1.42
SEC22A-201ENST00000309934 DUSP10Q9Y6W6 482 aa6.18□□□□□ -1.42
SEC22A-201ENST00000309934 SBF1O95248 1867 aa6.18□□□□□ -1.42
SEC22A-201ENST00000309934 CASTOR2A6NHX0 329 aa6.17□□□□□ -1.42
SEC22A-201ENST00000309934 F5H5T6 163 aa6.17□□□□□ -1.42
SEC22A-201ENST00000309934 DNALI1O14645 258 aaPredicted RBP6.17□□□□□ -1.42
SEC22A-201ENST00000309934 ZSCAN9O15535 394 aaPredicted RBP6.17□□□□□ -1.42
SEC22A-201ENST00000309934 PQBP1O60828 265 aaKnown RBP6.17□□□□□ -1.42
SEC22A-201ENST00000309934 CST3P01034 146 aaPredicted RBP6.17□□□□□ -1.42
SEC22A-201ENST00000309934 CKBP12277 381 aa6.17□□□□□ -1.42
SEC22A-201ENST00000309934 CCL5P13501 91 aa6.17□□□□□ -1.42
SEC22A-201ENST00000309934 FGFR4P22455 802 aa6.17□□□□□ -1.42
SEC22A-201ENST00000309934 AARSP49588 968 aaKnown RBP eCLIP6.17□□□□□ -1.42
SEC22A-201ENST00000309934 DYNLT1P63172 113 aa6.17□□□□□ -1.42
SEC22A-201ENST00000309934 DNAJC3Q13217 504 aa6.17□□□□□ -1.42
SEC22A-201ENST00000309934 NME3Q13232 169 aa6.17□□□□□ -1.42
SEC22A-201ENST00000309934 THOC5Q13769 683 aaKnown RBP6.17□□□□□ -1.42
SEC22A-201ENST00000309934 BTG3Q14201 252 aaPredicted RBP6.17□□□□□ -1.42
SEC22A-201ENST00000309934 SLC5A9Q2M3M2 681 aa6.17□□□□□ -1.42
SEC22A-201ENST00000309934 AGAP9Q5VTM2 703 aa6.17□□□□□ -1.42
SEC22A-201ENST00000309934 RWDD4Q6NW29 188 aaKnown RBP6.17□□□□□ -1.42
SEC22A-201ENST00000309934 TUBA3EQ6PEY2 450 aa6.17□□□□□ -1.42
SEC22A-201ENST00000309934 FAM183BPQ6ZVS7 135 aa6.17□□□□□ -1.42
SEC22A-201ENST00000309934 UBR7Q8N806 425 aa6.17□□□□□ -1.42
SEC22A-201ENST00000309934 DDX1Q92499 740 aaKnown RBP6.17□□□□□ -1.42
SEC22A-201ENST00000309934 DPF3Q92784 378 aa6.17□□□□□ -1.42
SEC22A-201ENST00000309934 VPS39Q96JC1 886 aa6.17□□□□□ -1.42
SEC22A-201ENST00000309934 PPP1R10Q96QC0 940 aaKnown RBP6.17□□□□□ -1.42
SEC22A-201ENST00000309934 HEMGNQ9BXL5 484 aa6.17□□□□□ -1.42
SEC22A-201ENST00000309934 GOLPH3Q9H4A6 298 aa6.17□□□□□ -1.42
SEC22A-201ENST00000309934 SAYSD1Q9NPB0 183 aa6.17□□□□□ -1.42
SEC22A-201ENST00000309934 MRPL17Q9NRX2 175 aaKnown RBP6.17□□□□□ -1.42
SEC22A-201ENST00000309934 EVLQ9UI08 416 aaPredicted RBP6.17□□□□□ -1.42
SEC22A-201ENST00000309934 MOSPD1Q9UJG1 213 aa6.17□□□□□ -1.42
SEC22A-201ENST00000309934 ADAM28Q9UKQ2 775 aa6.17□□□□□ -1.42
SEC22A-201ENST00000309934 DNPEPQ9ULA0 475 aa6.17□□□□□ -1.42
SEC22A-201ENST00000309934 L1RE1Q9UN81 338 aa6.17□□□□□ -1.42
SEC22A-201ENST00000309934 PACSIN2Q9UNF0 486 aaPredicted RBP6.17□□□□□ -1.42
SEC22A-201ENST00000309934 SH3GLB1Q9Y371 365 aa6.17□□□□□ -1.42
SEC22A-201ENST00000309934 hCG_1818297A0A087WSY0 165 aa6.17□□□□□ -1.42
SEC22A-201ENST00000309934 TRIM43BA6NCK2 446 aa6.17□□□□□ -1.42
SEC22A-201ENST00000309934 TRDMT1O14717 391 aaKnown RBP6.17□□□□□ -1.42
SEC22A-201ENST00000309934 SLC9A3R1O14745 358 aaPredicted RBP6.17□□□□□ -1.42
SEC22A-201ENST00000309934 ZNF185O15231 689 aa6.17□□□□□ -1.42
SEC22A-201ENST00000309934 MT-ND3P03897 115 aa6.17□□□□□ -1.42
SEC22A-201ENST00000309934 CLTBP09497 229 aa6.17□□□□□ -1.42
SEC22A-201ENST00000309934 BDNFP23560 247 aa6.17□□□□□ -1.42
SEC22A-201ENST00000309934 DDX6P26196 483 aaKnown RBP eCLIP6.17□□□□□ -1.42
SEC22A-201ENST00000309934 MIPP30301 263 aa6.17□□□□□ -1.42
SEC22A-201ENST00000309934 ATP6V1E1P36543 226 aa6.17□□□□□ -1.42
SEC22A-201ENST00000309934 ARL1P40616 181 aaPredicted RBP6.17□□□□□ -1.42
SEC22A-201ENST00000309934 NPY2RP49146 381 aa6.17□□□□□ -1.42
SEC22A-201ENST00000309934 ADIGQ0VDE8 80 aa6.17□□□□□ -1.42
SEC22A-201ENST00000309934 TBC1D25Q3MII6 688 aa6.17□□□□□ -1.42
SEC22A-201ENST00000309934 BEND6Q5SZJ8 279 aaPredicted RBP6.17□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms