RNA–Protein interactions for RNA: ENST00000299259.10

COPS2-201, Transcript of COP9 signalosome subunit 2, humanhuman

TSL 1 (best) BASIC

Gene COPS2, Length 2,036 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS2-201ENST00000299259 SFMBT1Q9UHJ3 866 aa10.85□□□□□ -0.67
COPS2-201ENST00000299259 NUDT5Q9UKK9 219 aa10.85□□□□□ -0.67
COPS2-201ENST00000299259 NYNRINQ9P2P1 1898 aaKnown RBP10.85□□□□□ -0.67
COPS2-201ENST00000299259 PPP1R12AO14974 1030 aaPredicted RBP10.85□□□□□ -0.67
COPS2-201ENST00000299259 LRIG2O94898 1065 aa10.85□□□□□ -0.67
COPS2-201ENST00000299259 SHBGP04278 402 aa10.85□□□□□ -0.67
COPS2-201ENST00000299259 ERCC2P18074 760 aa10.85□□□□□ -0.67
COPS2-201ENST00000299259 ATF6P18850 670 aa10.85□□□□□ -0.67
COPS2-201ENST00000299259 OR1D2P34982 312 aa10.85□□□□□ -0.67
COPS2-201ENST00000299259 GABPB1Q06547 395 aaPredicted RBP10.85□□□□□ -0.67
COPS2-201ENST00000299259 PDK1Q15118 436 aa10.85□□□□□ -0.67
COPS2-201ENST00000299259 HIF1AQ16665 826 aa10.85□□□□□ -0.67
COPS2-201ENST00000299259 ANKRD22Q5VYY1 191 aa10.85□□□□□ -0.67
COPS2-201ENST00000299259 CENPUQ71F23 418 aa10.85□□□□□ -0.67
COPS2-201ENST00000299259 PDZD4Q76G19 769 aaPredicted RBP10.85□□□□□ -0.67
COPS2-201ENST00000299259 CCDC33Q8N5R6 958 aa10.85□□□□□ -0.67
COPS2-201ENST00000299259 NAT8LQ8N9F0 302 aa10.85□□□□□ -0.67
COPS2-201ENST00000299259 PHACTR1Q9C0D0 580 aa10.85□□□□□ -0.67
COPS2-201ENST00000299259 OSBPL2Q9H1P3 480 aa10.85□□□□□ -0.67
COPS2-201ENST00000299259 CENPHQ9H3R5 247 aa10.85□□□□□ -0.67
COPS2-201ENST00000299259 TMBIM4Q9HC24 238 aa10.85□□□□□ -0.67
COPS2-201ENST00000299259 TLR8Q9NR97 1041 aaKnown RBP10.85□□□□□ -0.67
COPS2-201ENST00000299259 CLIC5Q9NZA1 410 aa10.85□□□□□ -0.67
COPS2-201ENST00000299259 SPG21Q9NZD8 308 aa10.85□□□□□ -0.67
COPS2-201ENST00000299259 NINJ2Q9NZG7 142 aa10.85□□□□□ -0.67
COPS2-201ENST00000299259 PCDH10Q9P2E7 1040 aa10.85□□□□□ -0.67
COPS2-201ENST00000299259 OR12D3Q9UGF7 316 aa10.85□□□□□ -0.67
COPS2-201ENST00000299259 SNX10Q9Y5X0 201 aa10.85□□□□□ -0.67
COPS2-201ENST00000299259 HMGB1P1B2RPK0 211 aaPredicted RBP10.84□□□□□ -0.67
COPS2-201ENST00000299259 GOLGA8MH3BSY2 632 aa10.84□□□□□ -0.67
COPS2-201ENST00000299259 STK10O94804 968 aaKnown RBP10.84□□□□□ -0.67
COPS2-201ENST00000299259 TMEM63AO94886 807 aa10.84□□□□□ -0.67
COPS2-201ENST00000299259 TTC4O95801 387 aa10.84□□□□□ -0.67
COPS2-201ENST00000299259 URODP06132 367 aa10.84□□□□□ -0.67
COPS2-201ENST00000299259 EPHB2P29323 1055 aa10.84□□□□□ -0.67
COPS2-201ENST00000299259 SERPINB6P35237 376 aa10.84□□□□□ -0.67
COPS2-201ENST00000299259 DSG1Q02413 1049 aa10.84□□□□□ -0.67
COPS2-201ENST00000299259 TAF10Q12962 218 aa10.84□□□□□ -0.67
COPS2-201ENST00000299259 PRKD1Q15139 912 aaPredicted RBP10.84□□□□□ -0.67
COPS2-201ENST00000299259 C4orf22Q6V702 233 aa10.84□□□□□ -0.67
COPS2-201ENST00000299259 OTOP2Q7RTS6 562 aa10.84□□□□□ -0.67
COPS2-201ENST00000299259 UHMK1Q8TAS1 419 aaKnown RBP10.84□□□□□ -0.67
COPS2-201ENST00000299259 FAM76AQ8TAV0 307 aa10.84□□□□□ -0.67
COPS2-201ENST00000299259 CCDC110Q8TBZ0 833 aa10.84□□□□□ -0.67
COPS2-201ENST00000299259 LRRN4Q8WUT4 740 aa10.84□□□□□ -0.67
COPS2-201ENST00000299259 ATP6V1G3Q96LB4 118 aa10.84□□□□□ -0.67
COPS2-201ENST00000299259 CEP295NLQ96MC4 621 aa10.84□□□□□ -0.67
COPS2-201ENST00000299259 HAPLN3Q96S86 360 aa10.84□□□□□ -0.67
COPS2-201ENST00000299259 FERMT1Q9BQL6 677 aa10.84□□□□□ -0.67
COPS2-201ENST00000299259 KLC2Q9H0B6 622 aa10.84□□□□□ -0.67
COPS2-201ENST00000299259 SAYSD1Q9NPB0 183 aa10.84□□□□□ -0.67
COPS2-201ENST00000299259 RAB6BQ9NRW1 208 aa10.84□□□□□ -0.67
COPS2-201ENST00000299259 OLA1Q9NTK5 396 aaKnown RBP10.84□□□□□ -0.67
COPS2-201ENST00000299259 TLR6Q9Y2C9 796 aa10.84□□□□□ -0.67
COPS2-201ENST00000299259 RAD54BQ9Y620 910 aa10.84□□□□□ -0.67
COPS2-201ENST00000299259 SLC38A8A6NNN8 435 aa10.84□□□□□ -0.67
COPS2-201ENST00000299259 ZBBXA8MT70 800 aa10.84□□□□□ -0.67
COPS2-201ENST00000299259 CHADO15335 359 aa10.84□□□□□ -0.67
COPS2-201ENST00000299259 PAGE1O75459 146 aa10.84□□□□□ -0.67
COPS2-201ENST00000299259 ZNF189O75820 626 aaPredicted RBP10.84□□□□□ -0.67
COPS2-201ENST00000299259 VAV1P15498 845 aa10.84□□□□□ -0.67
COPS2-201ENST00000299259 HTR7P34969 479 aa10.84□□□□□ -0.67
COPS2-201ENST00000299259 PPM1AP35813 382 aa10.84□□□□□ -0.67
COPS2-201ENST00000299259 MAGEA4P43358 317 aa10.84□□□□□ -0.67
COPS2-201ENST00000299259 GYS2P54840 703 aa10.84□□□□□ -0.67
COPS2-201ENST00000299259 ARL4CP56559 192 aa10.84□□□□□ -0.67
COPS2-201ENST00000299259 KCNJ11Q14654 390 aa10.84□□□□□ -0.67
COPS2-201ENST00000299259 KCTD16Q68DU8 428 aa10.84□□□□□ -0.67
COPS2-201ENST00000299259 CROCCP2Q86T23 111 aa10.84□□□□□ -0.67
COPS2-201ENST00000299259 NPWQ8N729 165 aa10.84□□□□□ -0.67
COPS2-201ENST00000299259 GIPC2Q8TF65 315 aa10.84□□□□□ -0.67
COPS2-201ENST00000299259 HTR3CQ8WXA8 447 aa10.84□□□□□ -0.67
COPS2-201ENST00000299259 C9orf72Q96LT7 481 aa10.84□□□□□ -0.67
COPS2-201ENST00000299259 TTC25Q96NG3 672 aa10.84□□□□□ -0.67
COPS2-201ENST00000299259 LGMNQ99538 433 aa10.84□□□□□ -0.67
COPS2-201ENST00000299259 CLSTN3Q9BQT9 956 aa10.84□□□□□ -0.67
COPS2-201ENST00000299259 MTPAPQ9NVV4 582 aaKnown RBP eCLIP10.84□□□□□ -0.67
COPS2-201ENST00000299259 PRKAG2Q9UGJ0 569 aa10.84□□□□□ -0.67
COPS2-201ENST00000299259 AFF4Q9UHB7 1163 aaKnown RBP10.84□□□□□ -0.67
COPS2-201ENST00000299259 XPO7Q9UIA9 1087 aaKnown RBP10.84□□□□□ -0.67
COPS2-201ENST00000299259 DENND4CQ5VZ89 1909 aa10.83□□□□□ -0.68
COPS2-201ENST00000299259 A0A0A0MRY4 1105 aa10.83□□□□□ -0.68
COPS2-201ENST00000299259 C5orf60A6NFR6 353 aa10.83□□□□□ -0.68
COPS2-201ENST00000299259 GCATO75600 419 aa10.83□□□□□ -0.68
COPS2-201ENST00000299259 MOCS2O96007 188 aaPredicted RBP10.83□□□□□ -0.68
COPS2-201ENST00000299259 APOEP02649 317 aa10.83□□□□□ -0.68
COPS2-201ENST00000299259 SLC2A3P11169 496 aa10.83□□□□□ -0.68
COPS2-201ENST00000299259 TUFMP49411 452 aaKnown RBP10.83□□□□□ -0.68
COPS2-201ENST00000299259 AP1B1Q10567 949 aa10.83□□□□□ -0.68
COPS2-201ENST00000299259 EFEMP1Q12805 493 aa10.83□□□□□ -0.68
COPS2-201ENST00000299259 PPIGQ13427 754 aaKnown RBP eCLIP10.83□□□□□ -0.68
COPS2-201ENST00000299259 KYNUQ16719 465 aa10.83□□□□□ -0.68
COPS2-201ENST00000299259 TPGS2Q68CL5 300 aa10.83□□□□□ -0.68
COPS2-201ENST00000299259 PPP1R21Q6ZMI0 780 aa10.83□□□□□ -0.68
COPS2-201ENST00000299259 ARHGEF18Q6ZSZ5 1173 aa10.83□□□□□ -0.68
COPS2-201ENST00000299259 DDX53Q86TM3 631 aaKnown RBP10.83□□□□□ -0.68
COPS2-201ENST00000299259 VPS52Q8N1B4 723 aa10.83□□□□□ -0.68
COPS2-201ENST00000299259 SH2D3CQ8N5H7 860 aa10.83□□□□□ -0.68
COPS2-201ENST00000299259 SPATA13Q96N96 652 aa10.83□□□□□ -0.68
COPS2-201ENST00000299259 TTLL2Q9BWV7 592 aa10.83□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms