RNA–Protein interactions for RNA: ENST00000298875.8

CPSF2-201, Transcript of cleavage and polyadenylation specific factor 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CPSF2, Length 13,035 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF2-201ENST00000298875 RAG1P15918 1043 aa5.69□□□□□ -1.5
CPSF2-201ENST00000298875 CNTFP26441 200 aa5.69□□□□□ -1.5
CPSF2-201ENST00000298875 DSG3P32926 999 aa5.69□□□□□ -1.5
CPSF2-201ENST00000298875 MACC1Q6ZN28 852 aa5.69□□□□□ -1.5
CPSF2-201ENST00000298875 EID3Q8N140 333 aa5.69□□□□□ -1.5
CPSF2-201ENST00000298875 SCAIQ8N9R8 606 aa5.69□□□□□ -1.5
CPSF2-201ENST00000298875 EXD1Q8NHP7 514 aa5.69□□□□□ -1.5
CPSF2-201ENST00000298875 SUN5Q8TC36 379 aa5.69□□□□□ -1.5
CPSF2-201ENST00000298875 OXNAD1Q96HP4 312 aaPredicted RBP5.69□□□□□ -1.5
CPSF2-201ENST00000298875 DCUN1D5Q9BTE7 237 aa5.69□□□□□ -1.5
CPSF2-201ENST00000298875 PABPC3Q9H361 631 aaKnown RBP5.69□□□□□ -1.5
CPSF2-201ENST00000298875 POLR1BQ9H9Y6 1135 aa5.69□□□□□ -1.5
CPSF2-201ENST00000298875 ZDHHC9Q9Y397 364 aa5.69□□□□□ -1.5
CPSF2-201ENST00000298875 ENDOD1O94919 500 aa5.69□□□□□ -1.5
CPSF2-201ENST00000298875 ECDO95905 644 aaPredicted RBP5.69□□□□□ -1.5
CPSF2-201ENST00000298875 KLRC1P26715 233 aa5.69□□□□□ -1.5
CPSF2-201ENST00000298875 PTPN4P29074 926 aa5.69□□□□□ -1.5
CPSF2-201ENST00000298875 ENPEPQ07075 957 aa5.69□□□□□ -1.5
CPSF2-201ENST00000298875 SEZ6Q53EL9 994 aa5.69□□□□□ -1.5
CPSF2-201ENST00000298875 LRRC74BQ6ZQY2 392 aa5.69□□□□□ -1.5
CPSF2-201ENST00000298875 AKAP14Q86UN6 197 aa5.69□□□□□ -1.5
CPSF2-201ENST00000298875 APOL2Q9BQE5 337 aa5.69□□□□□ -1.5
CPSF2-201ENST00000298875 CCSER1Q9C0I3 900 aa5.69□□□□□ -1.5
CPSF2-201ENST00000298875 MCM8Q9UJA3 840 aa5.69□□□□□ -1.5
CPSF2-201ENST00000298875 PXDNLA1KZ92 1463 aa5.69□□□□□ -1.5
CPSF2-201ENST00000298875 IQGAP1P46940 1657 aa5.69□□□□□ -1.5
CPSF2-201ENST00000298875 A0A1W2PRG6 482 aa5.69□□□□□ -1.5
CPSF2-201ENST00000298875 F5H5T6 163 aa5.69□□□□□ -1.5
CPSF2-201ENST00000298875 ZW10O43264 779 aa5.69□□□□□ -1.5
CPSF2-201ENST00000298875 HS6ST1O60243 411 aa5.69□□□□□ -1.5
CPSF2-201ENST00000298875 UBOX5O94941 541 aa5.69□□□□□ -1.5
CPSF2-201ENST00000298875 CDH3P22223 829 aa5.69□□□□□ -1.5
CPSF2-201ENST00000298875 RPL22P35268 128 aaKnown RBP5.69□□□□□ -1.5
CPSF2-201ENST00000298875 SNRPFP62306 86 aaKnown RBP5.69□□□□□ -1.5
CPSF2-201ENST00000298875 XRCC4Q13426 336 aa5.69□□□□□ -1.5
CPSF2-201ENST00000298875 BMPR2Q13873 1038 aa5.69□□□□□ -1.5
CPSF2-201ENST00000298875 AGKQ53H12 422 aa5.69□□□□□ -1.5
CPSF2-201ENST00000298875 FGD3Q5JSP0 725 aa5.69□□□□□ -1.5
CPSF2-201ENST00000298875 TIGD7Q6NT04 549 aaPredicted RBP5.69□□□□□ -1.5
CPSF2-201ENST00000298875 PMF1Q6P1K2 205 aa5.69□□□□□ -1.5
CPSF2-201ENST00000298875 ELOA2Q8IYF1 753 aaPredicted RBP5.69□□□□□ -1.5
CPSF2-201ENST00000298875 POMGNT2Q8NAT1 580 aa5.69□□□□□ -1.5
CPSF2-201ENST00000298875 BORCS5Q969J3 196 aa5.69□□□□□ -1.5
CPSF2-201ENST00000298875 RNF145Q96MT1 663 aa5.69□□□□□ -1.5
CPSF2-201ENST00000298875 RUSC1Q9BVN2 902 aa5.69□□□□□ -1.5
CPSF2-201ENST00000298875 PTPRHQ9HD43 1115 aa5.69□□□□□ -1.5
CPSF2-201ENST00000298875 RNF181Q9P0P0 153 aa5.69□□□□□ -1.5
CPSF2-201ENST00000298875 MYL12AP19105 171 aa5.68□□□□□ -1.5
CPSF2-201ENST00000298875 CACNA2D1P54289 1103 aa5.68□□□□□ -1.5
CPSF2-201ENST00000298875 STARD3Q14849 445 aa5.68□□□□□ -1.5
CPSF2-201ENST00000298875 ZBTB49Q6ZSB9 765 aa5.68□□□□□ -1.5
CPSF2-201ENST00000298875 MARK2Q7KZI7 788 aaKnown RBP5.68□□□□□ -1.5
CPSF2-201ENST00000298875 CLEC10AQ8IUN9 316 aa5.68□□□□□ -1.5
CPSF2-201ENST00000298875 SIX5Q8N196 739 aa5.68□□□□□ -1.5
CPSF2-201ENST00000298875 CCDC3Q9BQI4 270 aa5.68□□□□□ -1.5
CPSF2-201ENST00000298875 BDH2Q9BUT1 245 aa5.68□□□□□ -1.5
CPSF2-201ENST00000298875 ADGRE3Q9BY15 652 aa5.68□□□□□ -1.5
CPSF2-201ENST00000298875 MYLK2Q9H1R3 596 aa5.68□□□□□ -1.5
CPSF2-201ENST00000298875 STN1Q9H668 368 aaKnown RBP5.68□□□□□ -1.5
CPSF2-201ENST00000298875 ANKHQ9HCJ1 492 aa5.68□□□□□ -1.5
CPSF2-201ENST00000298875 DYRK1BQ9Y463 629 aa5.68□□□□□ -1.5
CPSF2-201ENST00000298875 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP5.68□□□□□ -1.5
CPSF2-201ENST00000298875 AGRPO00253 132 aa5.68□□□□□ -1.5
CPSF2-201ENST00000298875 LRG1P02750 347 aa5.68□□□□□ -1.5
CPSF2-201ENST00000298875 EPHB2P29323 1055 aa5.68□□□□□ -1.5
CPSF2-201ENST00000298875 OXCT1P55809 520 aa5.68□□□□□ -1.5
CPSF2-201ENST00000298875 ZNF177Q13360 481 aaPredicted RBP5.68□□□□□ -1.5
CPSF2-201ENST00000298875 SPAG16Q8N0X2 631 aa5.68□□□□□ -1.5
CPSF2-201ENST00000298875 MAGEE1Q9HCI5 957 aa5.68□□□□□ -1.5
CPSF2-201ENST00000298875 MTMR4Q9NYA4 1195 aa5.68□□□□□ -1.5
CPSF2-201ENST00000298875 CRNNQ9UBG3 495 aaPredicted RBP5.68□□□□□ -1.5
CPSF2-201ENST00000298875 VANGL2Q9ULK5 521 aa5.68□□□□□ -1.5
CPSF2-201ENST00000298875 MYRFQ9Y2G1 1151 aa5.68□□□□□ -1.5
CPSF2-201ENST00000298875 MYL12BO14950 172 aa5.68□□□□□ -1.5
CPSF2-201ENST00000298875 HALP42357 657 aa5.68□□□□□ -1.5
CPSF2-201ENST00000298875 CLCN2P51788 898 aa5.68□□□□□ -1.5
CPSF2-201ENST00000298875 NEDD8Q15843 81 aa5.68□□□□□ -1.5
CPSF2-201ENST00000298875 OTUD3Q5T2D3 398 aaPredicted RBP5.68□□□□□ -1.5
CPSF2-201ENST00000298875 CYP20A1Q6UW02 462 aa5.68□□□□□ -1.5
CPSF2-201ENST00000298875 SLC47A2Q86VL8 602 aa5.68□□□□□ -1.5
CPSF2-201ENST00000298875 EIF1ADQ8N9N8 165 aaKnown RBP5.68□□□□□ -1.5
CPSF2-201ENST00000298875 MKNK1Q9BUB5 465 aa5.68□□□□□ -1.5
CPSF2-201ENST00000298875 TMEM51Q9NW97 253 aa5.68□□□□□ -1.5
CPSF2-201ENST00000298875 AP4E1Q9UPM8 1137 aa5.68□□□□□ -1.5
CPSF2-201ENST00000298875 HBS1LQ9Y450 684 aaKnown RBP5.68□□□□□ -1.5
CPSF2-201ENST00000298875 EFCAB10A6NFE3 127 aa5.68□□□□□ -1.5
CPSF2-201ENST00000298875 PPP1R3GB7ZBB8 358 aa5.68□□□□□ -1.5
CPSF2-201ENST00000298875 BTN3A3O00478 584 aa5.68□□□□□ -1.5
CPSF2-201ENST00000298875 CES2O00748 559 aa5.68□□□□□ -1.5
CPSF2-201ENST00000298875 PHGDHO43175 533 aaKnown RBP5.68□□□□□ -1.5
CPSF2-201ENST00000298875 SSNA1O43805 119 aa5.68□□□□□ -1.5
CPSF2-201ENST00000298875 IFNA14P01570 189 aa5.68□□□□□ -1.5
CPSF2-201ENST00000298875 NPR3P17342 541 aa5.68□□□□□ -1.5
CPSF2-201ENST00000298875 MSH3P20585 1137 aa5.68□□□□□ -1.5
CPSF2-201ENST00000298875 NDUFAF6Q330K2 333 aa5.68□□□□□ -1.5
CPSF2-201ENST00000298875 ACOT1Q86TX2 421 aa5.68□□□□□ -1.5
CPSF2-201ENST00000298875 RORBQ92753 470 aa5.68□□□□□ -1.5
CPSF2-201ENST00000298875 HAVCR1Q96D42 359 aa5.68□□□□□ -1.5
CPSF2-201ENST00000298875 SEMA6AQ9H2E6 1030 aa5.68□□□□□ -1.5
CPSF2-201ENST00000298875 ELOVL6Q9H5J4 265 aa5.68□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms