RNA–Protein interactions for RNA: ENST00000298173.7

GTF2A1-201, Transcript of general transcription factor IIA subunit 1, humanhuman

TSL 2

Gene GTF2A1, Length 1,677 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2A1-201ENST00000298173 TARSL2A2RTX5 802 aaKnown RBP25.46■■□□□ 1.67
GTF2A1-201ENST00000298173 LIASO43766 372 aa25.46■■□□□ 1.67
GTF2A1-201ENST00000298173 LRIG2O94898 1065 aa25.46■■□□□ 1.67
GTF2A1-201ENST00000298173 APOEP02649 317 aa25.46■■□□□ 1.67
GTF2A1-201ENST00000298173 PECAM1P16284 738 aaPredicted RBP25.46■■□□□ 1.67
GTF2A1-201ENST00000298173 KCNJ1P48048 391 aa25.46■■□□□ 1.67
GTF2A1-201ENST00000298173 NRIP1P48552 1158 aa25.46■■□□□ 1.67
GTF2A1-201ENST00000298173 OTUD4Q01804 1114 aaKnown RBP25.46■■□□□ 1.67
GTF2A1-201ENST00000298173 MTA1Q13330 715 aa25.46■■□□□ 1.67
GTF2A1-201ENST00000298173 TXNDC8Q6A555 127 aa25.46■■□□□ 1.67
GTF2A1-201ENST00000298173 MAATS1Q7Z4T9 603 aa25.46■■□□□ 1.67
GTF2A1-201ENST00000298173 ATP6V0D2Q8N8Y2 350 aa25.46■■□□□ 1.67
GTF2A1-201ENST00000298173 NKD2Q969F2 451 aaPredicted RBP25.46■■□□□ 1.67
GTF2A1-201ENST00000298173 RUNDC3BQ96NL0 473 aa25.46■■□□□ 1.67
GTF2A1-201ENST00000298173 SLC22A12Q96S37 553 aa25.46■■□□□ 1.67
GTF2A1-201ENST00000298173 CYP2S1Q96SQ9 504 aa25.46■■□□□ 1.67
GTF2A1-201ENST00000298173 FAM118BQ9BPY3 351 aa25.46■■□□□ 1.67
GTF2A1-201ENST00000298173 PRKD2Q9BZL6 878 aa25.46■■□□□ 1.67
GTF2A1-201ENST00000298173 ETNK2Q9NVF9 386 aa25.46■■□□□ 1.67
GTF2A1-201ENST00000298173 NEU3Q9UQ49 428 aa25.46■■□□□ 1.67
GTF2A1-201ENST00000298173 DRG1Q9Y295 367 aaKnown RBP25.46■■□□□ 1.67
GTF2A1-201ENST00000298173 ZFXP17010 805 aaPredicted RBP25.45■■□□□ 1.67
GTF2A1-201ENST00000298173 CCR2P41597 374 aa25.45■■□□□ 1.67
GTF2A1-201ENST00000298173 KCNQ1P51787 676 aa25.45■■□□□ 1.67
GTF2A1-201ENST00000298173 SNX1Q13596 522 aa25.45■■□□□ 1.67
GTF2A1-201ENST00000298173 DHX34Q14147 1143 aaKnown RBP25.45■■□□□ 1.67
GTF2A1-201ENST00000298173 PIK3R6Q5UE93 754 aa25.45■■□□□ 1.67
GTF2A1-201ENST00000298173 NUGGCQ68CJ6 796 aa25.45■■□□□ 1.67
GTF2A1-201ENST00000298173 UNC45BQ8IWX7 931 aa25.45■■□□□ 1.67
GTF2A1-201ENST00000298173 ZNF707Q96C28 371 aaPredicted RBP25.45■■□□□ 1.67
GTF2A1-201ENST00000298173 ZFRQ96KR1 1074 aaKnown RBP25.45■■□□□ 1.67
GTF2A1-201ENST00000298173 CDCA3Q99618 268 aaPredicted RBP25.45■■□□□ 1.67
GTF2A1-201ENST00000298173 EPAS1Q99814 870 aa25.45■■□□□ 1.67
GTF2A1-201ENST00000298173 NACA2Q9H009 215 aa25.45■■□□□ 1.67
GTF2A1-201ENST00000298173 SIK2Q9H0K1 926 aa25.45■■□□□ 1.67
GTF2A1-201ENST00000298173 SLC12A6Q9UHW9 1150 aa25.45■■□□□ 1.67
GTF2A1-201ENST00000298173 DNPEPQ9ULA0 475 aa25.45■■□□□ 1.67
GTF2A1-201ENST00000298173 BHMG1C9JSJ3 638 aaPredicted RBP25.45■■□□□ 1.66
GTF2A1-201ENST00000298173 DCLK1O15075 740 aa25.45■■□□□ 1.66
GTF2A1-201ENST00000298173 MOCS2O96007 188 aaPredicted RBP25.45■■□□□ 1.66
GTF2A1-201ENST00000298173 HMBSP08397 361 aa25.45■■□□□ 1.66
GTF2A1-201ENST00000298173 HOXC13P31276 330 aa25.45■■□□□ 1.66
GTF2A1-201ENST00000298173 HTR7P34969 479 aa25.45■■□□□ 1.66
GTF2A1-201ENST00000298173 RBM10P98175 930 aaKnown RBP25.45■■□□□ 1.66
GTF2A1-201ENST00000298173 OASLQ15646 514 aaKnown RBP25.45■■□□□ 1.66
GTF2A1-201ENST00000298173 MS4A13Q5J8X5 152 aa25.45■■□□□ 1.66
GTF2A1-201ENST00000298173 NCBP2-AS2Q69YL0 99 aa25.45■■□□□ 1.66
GTF2A1-201ENST00000298173 CCDC70Q6NSX1 233 aa25.45■■□□□ 1.66
GTF2A1-201ENST00000298173 NPNTQ6UXI9 565 aa25.45■■□□□ 1.66
GTF2A1-201ENST00000298173 ZNF683Q8IZ20 524 aa25.45■■□□□ 1.66
GTF2A1-201ENST00000298173 VN1R2Q8NFZ6 395 aa25.45■■□□□ 1.66
GTF2A1-201ENST00000298173 ATL2Q8NHH9 583 aa25.45■■□□□ 1.66
GTF2A1-201ENST00000298173 MRPS31Q92665 395 aaKnown RBP25.45■■□□□ 1.66
GTF2A1-201ENST00000298173 HAUS1Q96CS2 278 aa25.45■■□□□ 1.66
GTF2A1-201ENST00000298173 ATXN3LQ9H3M9 355 aa25.45■■□□□ 1.66
GTF2A1-201ENST00000298173 CCDC195A0A1B0GUA6 201 aa25.44■■□□□ 1.66
GTF2A1-201ENST00000298173 XYLBO75191 536 aa25.44■■□□□ 1.66
GTF2A1-201ENST00000298173 MOSPD3O75425 235 aa25.44■■□□□ 1.66
GTF2A1-201ENST00000298173 FGF19O95750 216 aa25.44■■□□□ 1.66
GTF2A1-201ENST00000298173 MYL4P12829 197 aa25.44■■□□□ 1.66
GTF2A1-201ENST00000298173 PFKLP17858 780 aa25.44■■□□□ 1.66
GTF2A1-201ENST00000298173 HDCP19113 662 aa25.44■■□□□ 1.66
GTF2A1-201ENST00000298173 GGCXP38435 758 aa25.44■■□□□ 1.66
GTF2A1-201ENST00000298173 TPI1P60174 286 aa25.44■■□□□ 1.66
GTF2A1-201ENST00000298173 CYP4F8P98187 520 aa25.44■■□□□ 1.66
GTF2A1-201ENST00000298173 SLC7A5Q01650 507 aa25.44■■□□□ 1.66
GTF2A1-201ENST00000298173 DR1Q01658 176 aa25.44■■□□□ 1.66
GTF2A1-201ENST00000298173 BYSLQ13895 437 aaKnown RBP25.44■■□□□ 1.66
GTF2A1-201ENST00000298173 NOMO1Q15155 1222 aa25.44■■□□□ 1.66
GTF2A1-201ENST00000298173 ACBD5Q5T8D3 534 aaPredicted RBP25.44■■□□□ 1.66
GTF2A1-201ENST00000298173 ELMSAN1Q6PJG2 1045 aa25.44■■□□□ 1.66
GTF2A1-201ENST00000298173 ARL14EPQ8N8R7 260 aaPredicted RBP25.44■■□□□ 1.66
GTF2A1-201ENST00000298173 LEMD2Q8NC56 503 aa25.44■■□□□ 1.66
GTF2A1-201ENST00000298173 P3H4Q92791 437 aa25.44■■□□□ 1.66
GTF2A1-201ENST00000298173 AZIN2Q96A70 460 aa25.44■■□□□ 1.66
GTF2A1-201ENST00000298173 PLD4Q96BZ4 506 aa25.44■■□□□ 1.66
GTF2A1-201ENST00000298173 GKN1Q9NS71 199 aa25.44■■□□□ 1.66
GTF2A1-201ENST00000298173 A0A1W2PRU2 124 aa25.43■■□□□ 1.66
GTF2A1-201ENST00000298173 TTI1O43156 1089 aa25.43■■□□□ 1.66
GTF2A1-201ENST00000298173 STC2O76061 302 aa25.43■■□□□ 1.66
GTF2A1-201ENST00000298173 RHOP08100 348 aa25.43■■□□□ 1.66
GTF2A1-201ENST00000298173 ERCC2P18074 760 aa25.43■■□□□ 1.66
GTF2A1-201ENST00000298173 SLC10A2Q12908 348 aaPredicted RBP25.43■■□□□ 1.66
GTF2A1-201ENST00000298173 PAFAH1B3Q15102 231 aaKnown RBP25.43■■□□□ 1.66
GTF2A1-201ENST00000298173 C14orf80Q86SX3 495 aa25.43■■□□□ 1.66
GTF2A1-201ENST00000298173 CCDC105Q8IYK2 499 aa25.43■■□□□ 1.66
GTF2A1-201ENST00000298173 PNKPQ96T60 521 aa25.43■■□□□ 1.66
GTF2A1-201ENST00000298173 PRMT1Q99873 361 aaKnown RBP25.43■■□□□ 1.66
GTF2A1-201ENST00000298173 PARD6BQ9BYG5 372 aa25.43■■□□□ 1.66
GTF2A1-201ENST00000298173 FEZ2Q9UHY8 353 aaPredicted RBP25.43■■□□□ 1.66
GTF2A1-201ENST00000298173 DOCK4Q8N1I0 1966 aa25.43■■□□□ 1.66
GTF2A1-201ENST00000298173 NR2C2P49116 596 aa25.42■■□□□ 1.66
GTF2A1-201ENST00000298173 VCPP55072 806 aaKnown RBP25.42■■□□□ 1.66
GTF2A1-201ENST00000298173 ZXDBP98169 803 aa25.42■■□□□ 1.66
GTF2A1-201ENST00000298173 ZNF697Q5TEC3 545 aa25.42■■□□□ 1.66
GTF2A1-201ENST00000298173 C1orf228Q6PIY5 440 aa25.42■■□□□ 1.66
GTF2A1-201ENST00000298173 SHKBP1Q8TBC3 707 aa25.42■■□□□ 1.66
GTF2A1-201ENST00000298173 TRPC7Q9HCX4 862 aa25.42■■□□□ 1.66
GTF2A1-201ENST00000298173 STIM2Q9P246 746 aa25.42■■□□□ 1.66
GTF2A1-201ENST00000298173 NEU2Q9Y3R4 380 aa25.42■■□□□ 1.66
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms