RNA–Protein interactions for RNA: ENST00000296215.7

SNIP1-201, Transcript of Smad nuclear interacting protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNIP1, Length 4,605 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNIP1-201ENST00000296215 PIK3C3Q8NEB9 887 aa12.02□□□□□ -0.49
SNIP1-201ENST00000296215 SPOCK2Q92563 424 aa12.02□□□□□ -0.49
SNIP1-201ENST00000296215 S100PBPQ96BU1 408 aa12.02□□□□□ -0.49
SNIP1-201ENST00000296215 SPRTNQ9H040 489 aaPredicted RBP12.02□□□□□ -0.49
SNIP1-201ENST00000296215 POLE4Q9NR33 117 aa12.02□□□□□ -0.49
SNIP1-201ENST00000296215 DPP3Q9NY33 737 aa12.02□□□□□ -0.49
SNIP1-201ENST00000296215 NDUFAF4Q9P032 175 aa12.02□□□□□ -0.49
SNIP1-201ENST00000296215 ZNF222Q9UK12 451 aa12.02□□□□□ -0.49
SNIP1-201ENST00000296215 H0Y858 1186 aa12.01□□□□□ -0.49
SNIP1-201ENST00000296215 AGRPO00253 132 aa12.01□□□□□ -0.49
SNIP1-201ENST00000296215 CHL1O00533 1208 aa12.01□□□□□ -0.49
SNIP1-201ENST00000296215 KPNA5O15131 536 aa12.01□□□□□ -0.49
SNIP1-201ENST00000296215 IFNA7P01567 189 aa12.01□□□□□ -0.49
SNIP1-201ENST00000296215 MATN1P21941 496 aa12.01□□□□□ -0.49
SNIP1-201ENST00000296215 ARSEP51690 589 aa12.01□□□□□ -0.49
SNIP1-201ENST00000296215 CYP4F8P98187 520 aa12.01□□□□□ -0.49
SNIP1-201ENST00000296215 SMCO1Q147U7 214 aa12.01□□□□□ -0.49
SNIP1-201ENST00000296215 TYW3Q6IPR3 259 aaKnown RBP12.01□□□□□ -0.49
SNIP1-201ENST00000296215 MPRIPQ6WCQ1 1025 aa12.01□□□□□ -0.49
SNIP1-201ENST00000296215 FBXO33Q7Z6M2 555 aa12.01□□□□□ -0.49
SNIP1-201ENST00000296215 ATP6V0D2Q8N8Y2 350 aa12.01□□□□□ -0.49
SNIP1-201ENST00000296215 WDR36Q8NI36 951 aaKnown RBP12.01□□□□□ -0.49
SNIP1-201ENST00000296215 HERVK_113Q902F9 699 aa12.01□□□□□ -0.49
SNIP1-201ENST00000296215 PPA2Q9H2U2 334 aa12.01□□□□□ -0.49
SNIP1-201ENST00000296215 PFASO15067 1338 aa12.01□□□□□ -0.49
SNIP1-201ENST00000296215 ARHGEF33A8MVX0 844 aa12.01□□□□□ -0.49
SNIP1-201ENST00000296215 BTN3A1O00481 513 aa12.01□□□□□ -0.49
SNIP1-201ENST00000296215 TDP2O95551 362 aa12.01□□□□□ -0.49
SNIP1-201ENST00000296215 NPR3P17342 541 aa12.01□□□□□ -0.49
SNIP1-201ENST00000296215 KELP23276 732 aa12.01□□□□□ -0.49
SNIP1-201ENST00000296215 OR3A3P47888 321 aa12.01□□□□□ -0.49
SNIP1-201ENST00000296215 P2RX3P56373 397 aa12.01□□□□□ -0.49
SNIP1-201ENST00000296215 ST3GAL1Q11201 340 aa12.01□□□□□ -0.49
SNIP1-201ENST00000296215 DPYSQ14117 519 aa12.01□□□□□ -0.49
SNIP1-201ENST00000296215 GALNT3Q14435 633 aa12.01□□□□□ -0.49
SNIP1-201ENST00000296215 KCNT1Q5JUK3 1230 aa12.01□□□□□ -0.49
SNIP1-201ENST00000296215 OTUD3Q5T2D3 398 aaPredicted RBP12.01□□□□□ -0.49
SNIP1-201ENST00000296215 MPP7Q5T2T1 576 aa12.01□□□□□ -0.49
SNIP1-201ENST00000296215 SEL1L3Q68CR1 1132 aa12.01□□□□□ -0.49
SNIP1-201ENST00000296215 FAM178BQ8IXR5 827 aa12.01□□□□□ -0.49
SNIP1-201ENST00000296215 ZNF420Q8TAQ5 688 aaPredicted RBP12.01□□□□□ -0.49
SNIP1-201ENST00000296215 UROC1Q96N76 676 aa12.01□□□□□ -0.49
SNIP1-201ENST00000296215 NEUROG2Q9H2A3 272 aa12.01□□□□□ -0.49
SNIP1-201ENST00000296215 TTYH1Q9H313 450 aaPredicted RBP12.01□□□□□ -0.49
SNIP1-201ENST00000296215 RIBC2Q9H4K1 309 aa12.01□□□□□ -0.49
SNIP1-201ENST00000296215 SLC39A1Q9NY26 324 aa12.01□□□□□ -0.49
SNIP1-201ENST00000296215 WDR17Q8IZU2 1322 aa12.01□□□□□ -0.49
SNIP1-201ENST00000296215 E2F8A0AVK6 867 aa12.01□□□□□ -0.49
SNIP1-201ENST00000296215 ZNF879B4DU55 563 aa12.01□□□□□ -0.49
SNIP1-201ENST00000296215 ATMINO43313 823 aaPredicted RBP12.01□□□□□ -0.49
SNIP1-201ENST00000296215 KCNJ13O60928 360 aa12.01□□□□□ -0.49
SNIP1-201ENST00000296215 KCNH1O95259 989 aa12.01□□□□□ -0.49
SNIP1-201ENST00000296215 MMP8P22894 467 aa12.01□□□□□ -0.49
SNIP1-201ENST00000296215 TRAPPC10P48553 1259 aa12.01□□□□□ -0.49
SNIP1-201ENST00000296215 SLC18A2Q05940 514 aa12.01□□□□□ -0.49
SNIP1-201ENST00000296215 HPS6Q86YV9 775 aa12.01□□□□□ -0.49
SNIP1-201ENST00000296215 ZNF444Q8N0Y2 327 aaPredicted RBP12.01□□□□□ -0.49
SNIP1-201ENST00000296215 CACTIN-AS1Q8N1I8 211 aa12.01□□□□□ -0.49
SNIP1-201ENST00000296215 FANCBQ8NB91 859 aa12.01□□□□□ -0.49
SNIP1-201ENST00000296215 SLC4A9Q96Q91 983 aa12.01□□□□□ -0.49
SNIP1-201ENST00000296215 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP12.01□□□□□ -0.49
SNIP1-201ENST00000296215 UTYO14607 1347 aa12.01□□□□□ -0.49
SNIP1-201ENST00000296215 FKBP9O95302 570 aa12.01□□□□□ -0.49
SNIP1-201ENST00000296215 SLC26A3P40879 764 aa12.01□□□□□ -0.49
SNIP1-201ENST00000296215 TECP42680 631 aa12.01□□□□□ -0.49
SNIP1-201ENST00000296215 ENPEPQ07075 957 aa12.01□□□□□ -0.49
SNIP1-201ENST00000296215 MZT2BQ6NZ67 158 aa12.01□□□□□ -0.49
SNIP1-201ENST00000296215 NSMFQ6X4W1 530 aa12.01□□□□□ -0.49
SNIP1-201ENST00000296215 SCUBE3Q8IX30 993 aa12.01□□□□□ -0.49
SNIP1-201ENST00000296215 MPP5Q8N3R9 675 aa12.01□□□□□ -0.49
SNIP1-201ENST00000296215 ARL6IP6Q8N6S5 226 aa12.01□□□□□ -0.49
SNIP1-201ENST00000296215 METTL6Q8TCB7 284 aa12.01□□□□□ -0.49
SNIP1-201ENST00000296215 SGK3Q96BR1 496 aa12.01□□□□□ -0.49
SNIP1-201ENST00000296215 WASH6PQ9NQA3 447 aa12.01□□□□□ -0.49
SNIP1-201ENST00000296215 TMEM9Q9P0T7 183 aa12.01□□□□□ -0.49
SNIP1-201ENST00000296215 MTRRQ9UBK8 725 aa12.01□□□□□ -0.49
SNIP1-201ENST00000296215 MAGI2Q86UL8 1455 aa12□□□□□ -0.49
SNIP1-201ENST00000296215 MYOCOSA0A1B0GUC4 107 aa12□□□□□ -0.49
SNIP1-201ENST00000296215 PVALEFA0A1B0GWK0 134 aa12□□□□□ -0.49
SNIP1-201ENST00000296215 ZNF574Q6ZN55 896 aaPredicted RBP12□□□□□ -0.49
SNIP1-201ENST00000296215 TIGD4Q8IY51 512 aa12□□□□□ -0.49
SNIP1-201ENST00000296215 SVOPQ8N4V2 548 aa12□□□□□ -0.49
SNIP1-201ENST00000296215 PCDHGA11Q9Y5H2 935 aa12□□□□□ -0.49
SNIP1-201ENST00000296215 SLC30A1Q9Y6M5 507 aa12□□□□□ -0.49
SNIP1-201ENST00000296215 V9GYQ6 96 aa12□□□□□ -0.49
SNIP1-201ENST00000296215 KDM6AO15550 1401 aaPredicted RBP12□□□□□ -0.49
SNIP1-201ENST00000296215 ARHGEF12Q9NZN5 1544 aa12□□□□□ -0.49
SNIP1-201ENST00000296215 ADGRL1O94910 1474 aa12□□□□□ -0.49
SNIP1-201ENST00000296215 TRAV20A0A0B4J274 112 aa12□□□□□ -0.49
SNIP1-201ENST00000296215 PRR5-ARHGAP8B1AHC4 643 aa12□□□□□ -0.49
SNIP1-201ENST00000296215 WRBO00258 174 aa12□□□□□ -0.49
SNIP1-201ENST00000296215 NPR2P20594 1047 aa12□□□□□ -0.49
SNIP1-201ENST00000296215 GRIK1P39086 918 aa12□□□□□ -0.49
SNIP1-201ENST00000296215 ARHGAP8P85298 464 aa12□□□□□ -0.49
SNIP1-201ENST00000296215 XKRXQ6PP77 449 aa12□□□□□ -0.49
SNIP1-201ENST00000296215 CYP2R1Q6VVX0 501 aa12□□□□□ -0.49
SNIP1-201ENST00000296215 PCDHA4Q9UN74 947 aa12□□□□□ -0.49
SNIP1-201ENST00000296215 PBRM1Q86U86 1689 aa12□□□□□ -0.49
SNIP1-201ENST00000296215 ZC3H4Q9UPT8 1303 aaKnown RBP12□□□□□ -0.49
SNIP1-201ENST00000296215 EFCAB10A6NFE3 127 aa12□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms