RNA–Protein interactions for RNA: ENST00000295701.9

CNOT9-202, Transcript of CCR4-NOT transcription complex subunit 9, humanhuman

TSL 1 (best) BASIC

Gene CNOT9, Length 1,126 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT9-202ENST00000295701 MAPK8IP1Q9UQF2 711 aa9.75□□□□□ -0.85
CNOT9-202ENST00000295701 BPTFQ12830 3046 aa9.75□□□□□ -0.85
CNOT9-202ENST00000295701 KNTC1P50748 2209 aa9.75□□□□□ -0.85
CNOT9-202ENST00000295701 ANKRD11Q6UB99 2663 aaPredicted RBP9.75□□□□□ -0.85
CNOT9-202ENST00000295701 LOC400499M0QZD8 3231 aa9.75□□□□□ -0.85
CNOT9-202ENST00000295701 FAM221BA6H8Z2 402 aa9.74□□□□□ -0.85
CNOT9-202ENST00000295701 GFRA2O00451 464 aa9.74□□□□□ -0.85
CNOT9-202ENST00000295701 PDXKO00764 312 aa9.74□□□□□ -0.85
CNOT9-202ENST00000295701 IKBKBO14920 756 aa9.74□□□□□ -0.85
CNOT9-202ENST00000295701 CILPO75339 1184 aa9.74□□□□□ -0.85
CNOT9-202ENST00000295701 F13A1P00488 732 aa9.74□□□□□ -0.85
CNOT9-202ENST00000295701 PENKP01210 267 aaPredicted RBP9.74□□□□□ -0.85
CNOT9-202ENST00000295701 FTH1P19P0C7X4 201 aa9.74□□□□□ -0.85
CNOT9-202ENST00000295701 NCAM1P13591 858 aa9.74□□□□□ -0.85
CNOT9-202ENST00000295701 PRKCHP24723 683 aa9.74□□□□□ -0.85
CNOT9-202ENST00000295701 GOLGA8FQ08AF8 430 aa9.74□□□□□ -0.85
CNOT9-202ENST00000295701 GOLGA8DPQ0D2H9 430 aa9.74□□□□□ -0.85
CNOT9-202ENST00000295701 SCAPQ12770 1279 aa9.74□□□□□ -0.85
CNOT9-202ENST00000295701 ZNF234Q14588 700 aa9.74□□□□□ -0.85
CNOT9-202ENST00000295701 SYCP2LQ5T4T6 812 aa9.74□□□□□ -0.85
CNOT9-202ENST00000295701 DCAF12L1Q5VU92 463 aa9.74□□□□□ -0.85
CNOT9-202ENST00000295701 KLHDC10Q6PID8 442 aa9.74□□□□□ -0.85
CNOT9-202ENST00000295701 TMPRSS6Q8IU80 811 aa9.74□□□□□ -0.85
CNOT9-202ENST00000295701 NAXDQ8IW45 347 aa9.74□□□□□ -0.85
CNOT9-202ENST00000295701 ZCCHC9Q8N567 271 aaKnown RBP9.74□□□□□ -0.85
CNOT9-202ENST00000295701 EPS8L1Q8TE68 723 aa9.74□□□□□ -0.85
CNOT9-202ENST00000295701 DNASE2BQ8WZ79 361 aa9.74□□□□□ -0.85
CNOT9-202ENST00000295701 TAF4BQ92750 862 aa9.74□□□□□ -0.85
CNOT9-202ENST00000295701 SEMA4DQ92854 862 aa9.74□□□□□ -0.85
CNOT9-202ENST00000295701 PIWIL1Q96J94 861 aaKnown RBP9.74□□□□□ -0.85
CNOT9-202ENST00000295701 NT5C1AQ9BXI3 368 aa9.74□□□□□ -0.85
CNOT9-202ENST00000295701 DUSP16Q9BY84 665 aa9.74□□□□□ -0.85
CNOT9-202ENST00000295701 BACH2Q9BYV9 841 aa9.74□□□□□ -0.85
CNOT9-202ENST00000295701 USP36Q9P275 1121 aaKnown RBP9.74□□□□□ -0.85
CNOT9-202ENST00000295701 AGO1Q9UL18 857 aaKnown RBP9.74□□□□□ -0.85
CNOT9-202ENST00000295701 SLC27A6Q9Y2P4 619 aa9.74□□□□□ -0.85
CNOT9-202ENST00000295701 GPSM3Q9Y4H4 160 aa9.74□□□□□ -0.85
CNOT9-202ENST00000295701 PCDHB9Q9Y5E1 797 aa9.74□□□□□ -0.85
CNOT9-202ENST00000295701 PCDHA5Q9Y5H7 936 aa9.74□□□□□ -0.85
CNOT9-202ENST00000295701 USP3Q9Y6I4 520 aa9.74□□□□□ -0.85
CNOT9-202ENST00000295701 APC2O95996 2303 aa9.73□□□□□ -0.85
CNOT9-202ENST00000295701 DOCK9Q9BZ29 2069 aa9.73□□□□□ -0.85
CNOT9-202ENST00000295701 SMG1Q96Q15 3661 aaKnown RBP9.73□□□□□ -0.85
CNOT9-202ENST00000295701 SLC12A8A0AV02 714 aa9.73□□□□□ -0.85
CNOT9-202ENST00000295701 MEI4A8MW99 385 aa9.73□□□□□ -0.85
CNOT9-202ENST00000295701 H0Y626 953 aa9.73□□□□□ -0.85
CNOT9-202ENST00000295701 TULP2O00295 520 aa9.73□□□□□ -0.85
CNOT9-202ENST00000295701 KCNK3O14649 394 aa9.73□□□□□ -0.85
CNOT9-202ENST00000295701 TSPAN3O60637 253 aa9.73□□□□□ -0.85
CNOT9-202ENST00000295701 CBFA2T3O75081 653 aa9.73□□□□□ -0.85
CNOT9-202ENST00000295701 TRIM16O95361 564 aa9.73□□□□□ -0.85
CNOT9-202ENST00000295701 HLA-EP13747 358 aa9.73□□□□□ -0.85
CNOT9-202ENST00000295701 GMPRP36959 345 aa9.73□□□□□ -0.85
CNOT9-202ENST00000295701 TPMTP51580 245 aa9.73□□□□□ -0.85
CNOT9-202ENST00000295701 COPAP53621 1224 aa9.73□□□□□ -0.85
CNOT9-202ENST00000295701 ENPP2Q13822 863 aa9.73□□□□□ -0.85
CNOT9-202ENST00000295701 ZNF423Q2M1K9 1284 aa9.73□□□□□ -0.85
CNOT9-202ENST00000295701 CCDC186Q7Z3E2 898 aa9.73□□□□□ -0.85
CNOT9-202ENST00000295701 RABEPKQ7Z6M1 372 aa9.73□□□□□ -0.85
CNOT9-202ENST00000295701 FAM124AQ86V42 546 aa9.73□□□□□ -0.85
CNOT9-202ENST00000295701 PROSER1Q86XN7 944 aa9.73□□□□□ -0.85
CNOT9-202ENST00000295701 DENND1CQ8IV53 801 aa9.73□□□□□ -0.85
CNOT9-202ENST00000295701 ZNF366Q8N895 744 aa9.73□□□□□ -0.85
CNOT9-202ENST00000295701 RBBP8NLQ8NC74 664 aaPredicted RBP9.73□□□□□ -0.85
CNOT9-202ENST00000295701 TMEM174Q8WUU8 243 aa9.73□□□□□ -0.85
CNOT9-202ENST00000295701 ADAMTS14Q8WXS8 1223 aa9.73□□□□□ -0.85
CNOT9-202ENST00000295701 SIPA1Q96FS4 1042 aa9.73□□□□□ -0.85
CNOT9-202ENST00000295701 EEF2KMTQ96G04 330 aa9.73□□□□□ -0.85
CNOT9-202ENST00000295701 HEXIM2Q96MH2 286 aaKnown RBP9.73□□□□□ -0.85
CNOT9-202ENST00000295701 KCTD15Q96SI1 283 aaPredicted RBP9.73□□□□□ -0.85
CNOT9-202ENST00000295701 FAM124BQ9H5Z6 455 aaPredicted RBP9.73□□□□□ -0.85
CNOT9-202ENST00000295701 CYP3A43Q9HB55 503 aa9.73□□□□□ -0.85
CNOT9-202ENST00000295701 ELOVL2Q9NXB9 296 aa9.73□□□□□ -0.85
CNOT9-202ENST00000295701 PGPEP1Q9NXJ5 209 aa9.73□□□□□ -0.85
CNOT9-202ENST00000295701 EIF2B4Q9UI10 523 aaKnown RBP9.73□□□□□ -0.85
CNOT9-202ENST00000295701 RCOR1Q9UKL0 485 aa9.73□□□□□ -0.85
CNOT9-202ENST00000295701 FNDC3AQ9Y2H6 1198 aaKnown RBP9.73□□□□□ -0.85
CNOT9-202ENST00000295701 FRMD4BQ9Y2L6 1034 aa9.73□□□□□ -0.85
CNOT9-202ENST00000295701 TP53BP1Q12888 1972 aaPredicted RBP9.73□□□□□ -0.85
CNOT9-202ENST00000295701 A0A1B0GTW7 788 aa9.72□□□□□ -0.85
CNOT9-202ENST00000295701 A0A1B0GVT2 93 aa9.72□□□□□ -0.85
CNOT9-202ENST00000295701 METTL12A8MUP2 240 aa9.72□□□□□ -0.85
CNOT9-202ENST00000295701 CALUO43852 315 aaPredicted RBP9.72□□□□□ -0.85
CNOT9-202ENST00000295701 RALAP11233 206 aa9.72□□□□□ -0.85
CNOT9-202ENST00000295701 GNSP15586 552 aa9.72□□□□□ -0.85
CNOT9-202ENST00000295701 PFKFB1P16118 471 aa9.72□□□□□ -0.85
CNOT9-202ENST00000295701 NR2F2P24468 414 aa9.72□□□□□ -0.85
CNOT9-202ENST00000295701 CSNK1EP49674 416 aaKnown RBP9.72□□□□□ -0.85
CNOT9-202ENST00000295701 COG7P83436 770 aa9.72□□□□□ -0.85
CNOT9-202ENST00000295701 SLC14A1Q13336 389 aa9.72□□□□□ -0.85
CNOT9-202ENST00000295701 WDR45BQ5MNZ6 344 aa9.72□□□□□ -0.85
CNOT9-202ENST00000295701 CCNI2Q6ZMN8 369 aaPredicted RBP9.72□□□□□ -0.85
CNOT9-202ENST00000295701 BHLHA9Q7RTU4 235 aa9.72□□□□□ -0.85
CNOT9-202ENST00000295701 FAM186BQ8IYM0 893 aa9.72□□□□□ -0.85
CNOT9-202ENST00000295701 ZNF276Q8N554 614 aa9.72□□□□□ -0.85
CNOT9-202ENST00000295701 SLC4A11Q8NBS3 891 aa9.72□□□□□ -0.85
CNOT9-202ENST00000295701 C1orf216Q8TAB5 229 aa9.72□□□□□ -0.85
CNOT9-202ENST00000295701 MDM1Q8TC05 714 aa9.72□□□□□ -0.85
CNOT9-202ENST00000295701 SETD7Q8WTS6 366 aaKnown RBP9.72□□□□□ -0.85
CNOT9-202ENST00000295701 CYB5D2Q8WUJ1 264 aa9.72□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms