RNA–Protein interactions for RNA: ENST00000293748.9

SYNGAP1-201, Transcript of synaptic Ras GTPase activating protein 1, humanhuman

TSL 5

Gene SYNGAP1, Length 4,556 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1-201ENST00000293748 ZFRQ96KR1 1074 aaKnown RBP12.16□□□□□ -0.46
SYNGAP1-201ENST00000293748 OSMRQ99650 979 aa12.16□□□□□ -0.46
SYNGAP1-201ENST00000293748 BBS2Q9BXC9 721 aa12.16□□□□□ -0.46
SYNGAP1-201ENST00000293748 TMEM120AQ9BXJ8 343 aa12.16□□□□□ -0.46
SYNGAP1-201ENST00000293748 SHCBP1LQ9BZQ2 653 aa12.16□□□□□ -0.46
SYNGAP1-201ENST00000293748 AGPAT3Q9NRZ7 376 aa12.16□□□□□ -0.46
SYNGAP1-201ENST00000293748 SLC39A10Q9ULF5 831 aa12.16□□□□□ -0.46
SYNGAP1-201ENST00000293748 IQCF3P0C7M6 154 aa12.16□□□□□ -0.46
SYNGAP1-201ENST00000293748 FAM58BPP0C7Q3 252 aa12.16□□□□□ -0.46
SYNGAP1-201ENST00000293748 ACADSBP45954 432 aa12.16□□□□□ -0.46
SYNGAP1-201ENST00000293748 PEX5P50542 639 aa12.16□□□□□ -0.46
SYNGAP1-201ENST00000293748 AQP5P55064 265 aa12.16□□□□□ -0.46
SYNGAP1-201ENST00000293748 ZNF618Q5T7W0 954 aa12.16□□□□□ -0.46
SYNGAP1-201ENST00000293748 PHF21AQ96BD5 680 aa12.16□□□□□ -0.46
SYNGAP1-201ENST00000293748 SCLYQ96I15 445 aa12.16□□□□□ -0.46
SYNGAP1-201ENST00000293748 VPS50Q96JG6 964 aa12.16□□□□□ -0.46
SYNGAP1-201ENST00000293748 SLC9A7Q96T83 725 aa12.16□□□□□ -0.46
SYNGAP1-201ENST00000293748 HSD17B14Q9BPX1 270 aa12.16□□□□□ -0.46
SYNGAP1-201ENST00000293748 CNPY3Q9BT09 278 aa12.16□□□□□ -0.46
SYNGAP1-201ENST00000293748 SNX13Q9Y5W8 968 aa12.16□□□□□ -0.46
SYNGAP1-201ENST00000293748 TIMM44O43615 452 aa12.16□□□□□ -0.46
SYNGAP1-201ENST00000293748 RAB14P61106 215 aa12.16□□□□□ -0.46
SYNGAP1-201ENST00000293748 CCNG2Q16589 344 aa12.16□□□□□ -0.46
SYNGAP1-201ENST00000293748 SPDYCQ5MJ68 293 aa12.16□□□□□ -0.46
SYNGAP1-201ENST00000293748 LUZP2Q86TE4 346 aa12.16□□□□□ -0.46
SYNGAP1-201ENST00000293748 FBXO36Q8NEA4 188 aa12.16□□□□□ -0.46
SYNGAP1-201ENST00000293748 B4GALNT2Q8NHY0 566 aa12.16□□□□□ -0.46
SYNGAP1-201ENST00000293748 RFWD2Q8NHY2 731 aa12.16□□□□□ -0.46
SYNGAP1-201ENST00000293748 PAFAH2Q99487 392 aa12.16□□□□□ -0.46
SYNGAP1-201ENST00000293748 EEF2KO00418 725 aaKnown RBP12.15□□□□□ -0.46
SYNGAP1-201ENST00000293748 FCGR1AP12314 374 aa12.15□□□□□ -0.46
SYNGAP1-201ENST00000293748 EIF4BP23588 611 aaKnown RBP12.15□□□□□ -0.46
SYNGAP1-201ENST00000293748 MAGEA10P43363 369 aaPredicted RBP12.15□□□□□ -0.46
SYNGAP1-201ENST00000293748 NOTUMQ6P988 496 aa12.15□□□□□ -0.46
SYNGAP1-201ENST00000293748 IYDQ6PHW0 289 aa12.15□□□□□ -0.46
SYNGAP1-201ENST00000293748 HOMEZQ8IX15 550 aa12.15□□□□□ -0.46
SYNGAP1-201ENST00000293748 STK32AQ8WU08 396 aa12.15□□□□□ -0.46
SYNGAP1-201ENST00000293748 PIK3R5Q8WYR1 880 aa12.15□□□□□ -0.46
SYNGAP1-201ENST00000293748 ECSITQ9BQ95 431 aa12.15□□□□□ -0.46
SYNGAP1-201ENST00000293748 BCAS3Q9H6U6 928 aa12.15□□□□□ -0.46
SYNGAP1-201ENST00000293748 TBX21Q9UL17 535 aa12.15□□□□□ -0.46
SYNGAP1-201ENST00000293748 ZNFX1Q9P2E3 1918 aaKnown RBP12.15□□□□□ -0.46
SYNGAP1-201ENST00000293748 FOXN3O00409 490 aaPredicted RBP12.15□□□□□ -0.46
SYNGAP1-201ENST00000293748 NAMPTP43490 491 aa12.15□□□□□ -0.46
SYNGAP1-201ENST00000293748 RGS7P49802 495 aa12.15□□□□□ -0.46
SYNGAP1-201ENST00000293748 DENND1BQ6P3S1 775 aa12.15□□□□□ -0.46
SYNGAP1-201ENST00000293748 ZNF263O14978 683 aa12.15□□□□□ -0.46
SYNGAP1-201ENST00000293748 UPP2O95045 317 aa12.15□□□□□ -0.46
SYNGAP1-201ENST00000293748 C22orf31O95567 290 aa12.15□□□□□ -0.46
SYNGAP1-201ENST00000293748 GSNP06396 782 aa12.15□□□□□ -0.46
SYNGAP1-201ENST00000293748 CSF2RAP15509 400 aa12.15□□□□□ -0.46
SYNGAP1-201ENST00000293748 CHRNB3Q05901 458 aa12.15□□□□□ -0.46
SYNGAP1-201ENST00000293748 ZNF844Q08AG5 666 aa12.15□□□□□ -0.46
SYNGAP1-201ENST00000293748 MTM1Q13496 603 aa12.15□□□□□ -0.46
SYNGAP1-201ENST00000293748 UGCGQ16739 394 aa12.15□□□□□ -0.46
SYNGAP1-201ENST00000293748 C11orf63Q6NUN7 778 aa12.15□□□□□ -0.46
SYNGAP1-201ENST00000293748 GJB7Q6PEY0 223 aa12.15□□□□□ -0.46
SYNGAP1-201ENST00000293748 OTOP2Q7RTS6 562 aa12.15□□□□□ -0.46
SYNGAP1-201ENST00000293748 TMC3Q7Z5M5 1100 aa12.15□□□□□ -0.46
SYNGAP1-201ENST00000293748 LINC00523Q86TU6 105 aa12.15□□□□□ -0.46
SYNGAP1-201ENST00000293748 EFHBQ8N7U6 833 aa12.15□□□□□ -0.46
SYNGAP1-201ENST00000293748 VPS37AQ8NEZ2 397 aa12.15□□□□□ -0.46
SYNGAP1-201ENST00000293748 ATG4AQ8WYN0 398 aa12.15□□□□□ -0.46
SYNGAP1-201ENST00000293748 PLEKHA8Q96JA3 519 aa12.15□□□□□ -0.46
SYNGAP1-201ENST00000293748 NT5C1AQ9BXI3 368 aa12.15□□□□□ -0.46
SYNGAP1-201ENST00000293748 SEMA4AQ9H3S1 761 aa12.15□□□□□ -0.46
SYNGAP1-201ENST00000293748 AFF4Q9UHB7 1163 aaKnown RBP12.15□□□□□ -0.46
SYNGAP1-201ENST00000293748 TRAPPC3O43617 180 aa12.15□□□□□ -0.47
SYNGAP1-201ENST00000293748 PAX7P23759 505 aa12.15□□□□□ -0.47
SYNGAP1-201ENST00000293748 RGS4P49798 205 aa12.15□□□□□ -0.47
SYNGAP1-201ENST00000293748 PREPLQ4J6C6 727 aaPredicted RBP12.15□□□□□ -0.47
SYNGAP1-201ENST00000293748 SEL1L3Q68CR1 1132 aa12.15□□□□□ -0.47
SYNGAP1-201ENST00000293748 CRELD2Q6UXH1 353 aaPredicted RBP12.15□□□□□ -0.47
SYNGAP1-201ENST00000293748 CCDC81Q6ZN84 652 aa12.15□□□□□ -0.47
SYNGAP1-201ENST00000293748 PCYT2Q99447 389 aa12.15□□□□□ -0.47
SYNGAP1-201ENST00000293748 BTBD10Q9BSF8 475 aa12.15□□□□□ -0.47
SYNGAP1-201ENST00000293748 C17orf80Q9BSJ5 609 aa12.15□□□□□ -0.47
SYNGAP1-201ENST00000293748 IL1RL2Q9HB29 575 aa12.15□□□□□ -0.47
SYNGAP1-201ENST00000293748 SAR1AQ9NR31 198 aa12.15□□□□□ -0.47
SYNGAP1-201ENST00000293748 CHST12Q9NRB3 414 aa12.15□□□□□ -0.47
SYNGAP1-201ENST00000293748 ITGB1BP2Q9UKP3 347 aa12.15□□□□□ -0.47
SYNGAP1-201ENST00000293748 SNX9Q9Y5X1 595 aa12.15□□□□□ -0.47
SYNGAP1-201ENST00000293748 HSFX4A0A1B0GTS1 333 aaPredicted RBP12.14□□□□□ -0.47
SYNGAP1-201ENST00000293748 FAM95CA0A1B0GW59 222 aa12.14□□□□□ -0.47
SYNGAP1-201ENST00000293748 HSFX3A0A1B0GWH4 333 aaPredicted RBP12.14□□□□□ -0.47
SYNGAP1-201ENST00000293748 EXTL3O43909 919 aa12.14□□□□□ -0.47
SYNGAP1-201ENST00000293748 IL18RAPO95256 599 aa12.14□□□□□ -0.47
SYNGAP1-201ENST00000293748 ATP5BP06576 529 aaKnown RBP12.14□□□□□ -0.47
SYNGAP1-201ENST00000293748 ACRP10323 421 aa12.14□□□□□ -0.47
SYNGAP1-201ENST00000293748 ZNF23P17027 643 aa12.14□□□□□ -0.47
SYNGAP1-201ENST00000293748 KHDRBS1Q07666 443 aaKnown RBP eCLIP12.14□□□□□ -0.47
SYNGAP1-201ENST00000293748 LAMTOR4Q0VGL1 99 aa12.14□□□□□ -0.47
SYNGAP1-201ENST00000293748 TBX2Q13207 712 aaPredicted RBP12.14□□□□□ -0.47
SYNGAP1-201ENST00000293748 PLEKHA7Q6IQ23 1121 aa12.14□□□□□ -0.47
SYNGAP1-201ENST00000293748 GLB1LQ6UWU2 654 aa12.14□□□□□ -0.47
SYNGAP1-201ENST00000293748 ZBTB49Q6ZSB9 765 aa12.14□□□□□ -0.47
SYNGAP1-201ENST00000293748 EXD1Q8NHP7 514 aa12.14□□□□□ -0.47
SYNGAP1-201ENST00000293748 RSPH1Q8WYR4 309 aa12.14□□□□□ -0.47
SYNGAP1-201ENST00000293748 SH2D3AQ9BRG2 576 aa12.14□□□□□ -0.47
SYNGAP1-201ENST00000293748 PACSIN1Q9BY11 444 aa12.14□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms