RNA–Protein interactions for RNA: ENST00000292476.9

CPSF4-201, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CPSF4, Length 1,691 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-201ENST00000292476 NT5C3BQ969T7 300 aa17.37■□□□□ 0.37
CPSF4-201ENST00000292476 TIFAQ96CG3 184 aa17.37■□□□□ 0.37
CPSF4-201ENST00000292476 ZNF558Q96NG5 402 aa17.37■□□□□ 0.37
CPSF4-201ENST00000292476 TMEM209Q96SK2 561 aa17.37■□□□□ 0.37
CPSF4-201ENST00000292476 FAM118BQ9BPY3 351 aa17.37■□□□□ 0.37
CPSF4-201ENST00000292476 NKX2-4Q9H2Z4 354 aa17.37■□□□□ 0.37
CPSF4-201ENST00000292476 PRDM16Q9HAZ2 1276 aa17.37■□□□□ 0.37
CPSF4-201ENST00000292476 SSU72Q9NP77 194 aaKnown RBP17.37■□□□□ 0.37
CPSF4-201ENST00000292476 HAUS2Q9NVX0 235 aa17.37■□□□□ 0.37
CPSF4-201ENST00000292476 MSRAQ9UJ68 235 aa17.37■□□□□ 0.37
CPSF4-201ENST00000292476 ARL2BPQ9Y2Y0 163 aa17.37■□□□□ 0.37
CPSF4-201ENST00000292476 FARP1Q9Y4F1 1045 aaPredicted RBP17.37■□□□□ 0.37
CPSF4-201ENST00000292476 USP3Q9Y6I4 520 aa17.37■□□□□ 0.37
CPSF4-201ENST00000292476 ENDOD1O94919 500 aa17.36■□□□□ 0.37
CPSF4-201ENST00000292476 NDUFV1P49821 464 aa17.36■□□□□ 0.37
CPSF4-201ENST00000292476 SULT1E1P49888 294 aa17.36■□□□□ 0.37
CPSF4-201ENST00000292476 GPR17Q13304 367 aa17.36■□□□□ 0.37
CPSF4-201ENST00000292476 KRT81Q14533 505 aa17.36■□□□□ 0.37
CPSF4-201ENST00000292476 SMTNL2Q2TAL5 461 aa17.36■□□□□ 0.37
CPSF4-201ENST00000292476 ZC3H12AQ5D1E8 599 aaKnown RBP17.36■□□□□ 0.37
CPSF4-201ENST00000292476 GPR153Q6NV75 609 aa17.36■□□□□ 0.37
CPSF4-201ENST00000292476 CYB5D1Q6P9G0 228 aa17.36■□□□□ 0.37
CPSF4-201ENST00000292476 SPATA21Q7Z572 469 aa17.36■□□□□ 0.37
CPSF4-201ENST00000292476 CYP4X1Q8N118 509 aa17.36■□□□□ 0.37
CPSF4-201ENST00000292476 PHOSPHO2Q8TCD6 241 aa17.36■□□□□ 0.37
CPSF4-201ENST00000292476 HSPH1Q92598 858 aa17.36■□□□□ 0.37
CPSF4-201ENST00000292476 PRCCQ92733 491 aaPredicted RBP17.36■□□□□ 0.37
CPSF4-201ENST00000292476 CEP295NLQ96MC4 621 aa17.36■□□□□ 0.37
CPSF4-201ENST00000292476 PWWP2AQ96N64 755 aa17.36■□□□□ 0.37
CPSF4-201ENST00000292476 ZBED2Q9BTP6 218 aa17.36■□□□□ 0.37
CPSF4-201ENST00000292476 FBXO44Q9H4M3 255 aa17.36■□□□□ 0.37
CPSF4-201ENST00000292476 CWH43Q9H720 699 aa17.36■□□□□ 0.37
CPSF4-201ENST00000292476 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP17.36■□□□□ 0.37
CPSF4-201ENST00000292476 FNDC1Q4ZHG4 1894 aaPredicted RBP17.36■□□□□ 0.37
CPSF4-201ENST00000292476 RASA4BC9J798 803 aa17.36■□□□□ 0.37
CPSF4-201ENST00000292476 CHUKO15111 745 aa17.36■□□□□ 0.37
CPSF4-201ENST00000292476 RASA4O43374 803 aa17.36■□□□□ 0.37
CPSF4-201ENST00000292476 USP17L7P0C7H9 530 aa17.36■□□□□ 0.37
CPSF4-201ENST00000292476 CPB1P15086 417 aa17.36■□□□□ 0.37
CPSF4-201ENST00000292476 CREB1P16220 341 aa17.36■□□□□ 0.37
CPSF4-201ENST00000292476 HDAC4P56524 1084 aa17.36■□□□□ 0.37
CPSF4-201ENST00000292476 CBLBQ13191 982 aa17.36■□□□□ 0.37
CPSF4-201ENST00000292476 RAB30Q15771 203 aa17.36■□□□□ 0.37
CPSF4-201ENST00000292476 KCNT1Q5JUK3 1230 aa17.36■□□□□ 0.37
CPSF4-201ENST00000292476 TXNRD3NBQ6F5E7 133 aa17.36■□□□□ 0.37
CPSF4-201ENST00000292476 KIAA1841Q6NSI8 718 aa17.36■□□□□ 0.37
CPSF4-201ENST00000292476 PPIL6Q8IXY8 311 aa17.36■□□□□ 0.37
CPSF4-201ENST00000292476 SRRM1Q8IYB3 904 aaKnown RBP17.36■□□□□ 0.37
CPSF4-201ENST00000292476 ARHGAP18Q8N392 663 aa17.36■□□□□ 0.37
CPSF4-201ENST00000292476 ANKRD42Q8N9B4 389 aa17.36■□□□□ 0.37
CPSF4-201ENST00000292476 IGSF21Q96ID5 467 aa17.36■□□□□ 0.37
CPSF4-201ENST00000292476 TGS1Q96RS0 853 aaKnown RBP17.36■□□□□ 0.37
CPSF4-201ENST00000292476 NPY6RQ99463 290 aa17.36■□□□□ 0.37
CPSF4-201ENST00000292476 TTYH1Q9H313 450 aaPredicted RBP17.36■□□□□ 0.37
CPSF4-201ENST00000292476 STAU2Q9NUL3 570 aaKnown RBP eCLIP17.36■□□□□ 0.37
CPSF4-201ENST00000292476 FGFR1OP2Q9NVK5 253 aa17.36■□□□□ 0.37
CPSF4-201ENST00000292476 COMMD8Q9NX08 183 aa17.36■□□□□ 0.37
CPSF4-201ENST00000292476 ABI2Q9NYB9 513 aaPredicted RBP17.36■□□□□ 0.37
CPSF4-201ENST00000292476 PRKAG3Q9UGI9 489 aa17.36■□□□□ 0.37
CPSF4-201ENST00000292476 BACE2Q9Y5Z0 518 aa17.36■□□□□ 0.37
CPSF4-201ENST00000292476 CDH23Q9H251 3354 aa17.35■□□□□ 0.37
CPSF4-201ENST00000292476 SGK1O00141 431 aa17.35■□□□□ 0.37
CPSF4-201ENST00000292476 TLL1O43897 1013 aa17.35■□□□□ 0.37
CPSF4-201ENST00000292476 CYP2F1P24903 491 aa17.35■□□□□ 0.37
CPSF4-201ENST00000292476 GCAP28676 217 aa17.35■□□□□ 0.37
CPSF4-201ENST00000292476 PHBP35232 272 aa17.35■□□□□ 0.37
CPSF4-201ENST00000292476 CACNA2D1P54289 1103 aa17.35■□□□□ 0.37
CPSF4-201ENST00000292476 CDH6P55285 790 aa17.35■□□□□ 0.37
CPSF4-201ENST00000292476 CCDC15Q0P6D6 951 aa17.35■□□□□ 0.37
CPSF4-201ENST00000292476 MPP2Q14168 576 aa17.35■□□□□ 0.37
CPSF4-201ENST00000292476 BTG3Q14201 252 aaPredicted RBP17.35■□□□□ 0.37
CPSF4-201ENST00000292476 LRRC14Q15048 493 aa17.35■□□□□ 0.37
CPSF4-201ENST00000292476 TMED2Q15363 201 aa17.35■□□□□ 0.37
CPSF4-201ENST00000292476 GALNTL6Q49A17 601 aa17.35■□□□□ 0.37
CPSF4-201ENST00000292476 EFHC2Q5JST6 749 aa17.35■□□□□ 0.37
CPSF4-201ENST00000292476 SH3PXD2AQ5TCZ1 1133 aa17.35■□□□□ 0.37
CPSF4-201ENST00000292476 NUGGCQ68CJ6 796 aa17.35■□□□□ 0.37
CPSF4-201ENST00000292476 RNF43Q68DV7 783 aa17.35■□□□□ 0.37
CPSF4-201ENST00000292476 KCNT2Q6UVM3 1135 aa17.35■□□□□ 0.37
CPSF4-201ENST00000292476 PARP9Q8IXQ6 854 aa17.35■□□□□ 0.37
CPSF4-201ENST00000292476 GLIS1Q8NBF1 620 aa17.35■□□□□ 0.37
CPSF4-201ENST00000292476 MGARPQ8TDB4 240 aa17.35■□□□□ 0.37
CPSF4-201ENST00000292476 PGAP3Q96FM1 320 aaPredicted RBP17.35■□□□□ 0.37
CPSF4-201ENST00000292476 TMEM169Q96HH4 297 aa17.35■□□□□ 0.37
CPSF4-201ENST00000292476 CALN1Q9BXU9 219 aa17.35■□□□□ 0.37
CPSF4-201ENST00000292476 PCDHA11Q9Y5I1 949 aa17.35■□□□□ 0.37
CPSF4-201ENST00000292476 YJEFN3A6XGL0 299 aa17.34■□□□□ 0.37
CPSF4-201ENST00000292476 NT5C1B-RDH14C9J2C7 533 aa17.34■□□□□ 0.37
CPSF4-201ENST00000292476 E7ENQ6 273 aa17.34■□□□□ 0.37
CPSF4-201ENST00000292476 TBC1D4O60343 1298 aa17.34■□□□□ 0.37
CPSF4-201ENST00000292476 CA3P07451 260 aa17.34■□□□□ 0.37
CPSF4-201ENST00000292476 NCAM1P13591 858 aa17.34■□□□□ 0.37
CPSF4-201ENST00000292476 ZFXP17010 805 aaPredicted RBP17.34■□□□□ 0.37
CPSF4-201ENST00000292476 PPM1AP35813 382 aa17.34■□□□□ 0.37
CPSF4-201ENST00000292476 ARL4CP56559 192 aa17.34■□□□□ 0.37
CPSF4-201ENST00000292476 DEUP1Q05D60 604 aa17.34■□□□□ 0.37
CPSF4-201ENST00000292476 SNCBQ16143 134 aa17.34■□□□□ 0.37
CPSF4-201ENST00000292476 HIF1AQ16665 826 aa17.34■□□□□ 0.37
CPSF4-201ENST00000292476 SCN4BQ8IWT1 228 aa17.34■□□□□ 0.37
CPSF4-201ENST00000292476 NUP93Q8N1F7 819 aa17.34■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 16 ms