RNA–Protein interactions for RNA: ENST00000287814.4

TIMP4-201, Transcript of TIMP metallopeptidase inhibitor 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TIMP4, Length 1,650 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TIMP4-201ENST00000287814 NCAM2O15394 837 aa20.61■□□□□ 0.89
TIMP4-201ENST00000287814 F9P00740 461 aa20.61■□□□□ 0.89
TIMP4-201ENST00000287814 CISD3P0C7P0 127 aa20.61■□□□□ 0.89
TIMP4-201ENST00000287814 DRD1P21728 446 aa20.61■□□□□ 0.89
TIMP4-201ENST00000287814 RPS9P46781 194 aaKnown RBP20.61■□□□□ 0.89
TIMP4-201ENST00000287814 OGDHQ02218 1023 aa20.61■□□□□ 0.89
TIMP4-201ENST00000287814 KDSRQ06136 332 aa20.61■□□□□ 0.89
TIMP4-201ENST00000287814 CDO1Q16878 200 aa20.61■□□□□ 0.89
TIMP4-201ENST00000287814 RAP1GAP2Q684P5 730 aa20.61■□□□□ 0.89
TIMP4-201ENST00000287814 ATP6V0D2Q8N8Y2 350 aa20.61■□□□□ 0.89
TIMP4-201ENST00000287814 TMA16Q96EY4 203 aaKnown RBP20.61■□□□□ 0.89
TIMP4-201ENST00000287814 PRMT1Q99873 361 aaKnown RBP20.61■□□□□ 0.89
TIMP4-201ENST00000287814 TRIM7Q9C029 511 aa20.61■□□□□ 0.89
TIMP4-201ENST00000287814 WDCPQ9H6R7 721 aa20.61■□□□□ 0.89
TIMP4-201ENST00000287814 ARHGEF4Q9NR80 690 aa20.61■□□□□ 0.89
TIMP4-201ENST00000287814 DNAJC17Q9NVM6 304 aaKnown RBP20.61■□□□□ 0.89
TIMP4-201ENST00000287814 ARHGEF38Q9NXL2 777 aa20.61■□□□□ 0.89
TIMP4-201ENST00000287814 CNOT8Q9UFF9 292 aaKnown RBP20.61■□□□□ 0.89
TIMP4-201ENST00000287814 KMT2EQ8IZD2 1858 aa20.6■□□□□ 0.89
TIMP4-201ENST00000287814 SSU72P8A0A1W2PR75 194 aa20.6■□□□□ 0.89
TIMP4-201ENST00000287814 KAT7O95251 611 aa20.6■□□□□ 0.89
TIMP4-201ENST00000287814 SLC2A3P11169 496 aa20.6■□□□□ 0.89
TIMP4-201ENST00000287814 ABCB4P21439 1286 aa20.6■□□□□ 0.89
TIMP4-201ENST00000287814 GPD1P21695 349 aa20.6■□□□□ 0.89
TIMP4-201ENST00000287814 HOXD9P28356 352 aaPredicted RBP20.6■□□□□ 0.89
TIMP4-201ENST00000287814 SDC4P31431 198 aa20.6■□□□□ 0.89
TIMP4-201ENST00000287814 RDXP35241 583 aaKnown RBP20.6■□□□□ 0.89
TIMP4-201ENST00000287814 PTPN9P43378 593 aa20.6■□□□□ 0.89
TIMP4-201ENST00000287814 TSR1Q2NL82 804 aaKnown RBP20.6■□□□□ 0.89
TIMP4-201ENST00000287814 MPPE1Q53F39 396 aa20.6■□□□□ 0.89
TIMP4-201ENST00000287814 MS4A13Q5J8X5 152 aa20.6■□□□□ 0.89
TIMP4-201ENST00000287814 DGKKQ5KSL6 1271 aa20.6■□□□□ 0.89
TIMP4-201ENST00000287814 CCDC122Q5T0U0 273 aa20.6■□□□□ 0.89
TIMP4-201ENST00000287814 DTWD2Q8NBA8 298 aa20.6■□□□□ 0.89
TIMP4-201ENST00000287814 CENPIQ92674 756 aaPredicted RBP20.6■□□□□ 0.89
TIMP4-201ENST00000287814 ZNF653Q96CK0 615 aa20.6■□□□□ 0.89
TIMP4-201ENST00000287814 TKTL2Q9H0I9 626 aa20.6■□□□□ 0.89
TIMP4-201ENST00000287814 CHRDQ9H2X0 955 aa20.6■□□□□ 0.89
TIMP4-201ENST00000287814 PARVAQ9NVD7 372 aa20.6■□□□□ 0.89
TIMP4-201ENST00000287814 DEC1Q9P2X7 70 aa20.6■□□□□ 0.89
TIMP4-201ENST00000287814 A0A0A0MRY4 1105 aa20.59■□□□□ 0.89
TIMP4-201ENST00000287814 CYBBP04839 570 aa20.59■□□□□ 0.89
TIMP4-201ENST00000287814 TACR2P21452 398 aa20.59■□□□□ 0.89
TIMP4-201ENST00000287814 GGCXP38435 758 aa20.59■□□□□ 0.89
TIMP4-201ENST00000287814 RPS24P62847 133 aaKnown RBP20.59■□□□□ 0.89
TIMP4-201ENST00000287814 SLC18A3Q16572 532 aa20.59■□□□□ 0.89
TIMP4-201ENST00000287814 PKN3Q6P5Z2 889 aa20.59■□□□□ 0.89
TIMP4-201ENST00000287814 FAM131BQ86XD5 332 aa20.59■□□□□ 0.89
TIMP4-201ENST00000287814 XPO6Q96QU8 1125 aaKnown RBP20.59■□□□□ 0.89
TIMP4-201ENST00000287814 THAP2Q9H0W7 228 aa20.59■□□□□ 0.89
TIMP4-201ENST00000287814 NHEJ1Q9H9Q4 299 aaPredicted RBP20.59■□□□□ 0.89
TIMP4-201ENST00000287814 MYO1AQ9UBC5 1043 aa20.59■□□□□ 0.89
TIMP4-201ENST00000287814 SLC12A6Q9UHW9 1150 aa20.59■□□□□ 0.89
TIMP4-201ENST00000287814 SNX10Q9Y5X0 201 aa20.59■□□□□ 0.89
TIMP4-201ENST00000287814 HS3ST4Q9Y661 456 aa20.59■□□□□ 0.89
TIMP4-201ENST00000287814 MIA3Q5JRA6 1907 aa20.59■□□□□ 0.89
TIMP4-201ENST00000287814 PAGE1O75459 146 aa20.58■□□□□ 0.89
TIMP4-201ENST00000287814 ZNF143P52747 638 aaPredicted RBP20.58■□□□□ 0.89
TIMP4-201ENST00000287814 HDAC4P56524 1084 aa20.58■□□□□ 0.89
TIMP4-201ENST00000287814 MTAPQ13126 283 aa20.58■□□□□ 0.89
TIMP4-201ENST00000287814 LRRC32Q14392 662 aa20.58■□□□□ 0.89
TIMP4-201ENST00000287814 BRMS1LQ5PSV4 323 aa20.58■□□□□ 0.89
TIMP4-201ENST00000287814 DCUN1D2Q6PH85 259 aa20.58■□□□□ 0.89
TIMP4-201ENST00000287814 LGI2Q8N0V4 545 aa20.58■□□□□ 0.89
TIMP4-201ENST00000287814 CFAP52Q8N1V2 620 aa20.58■□□□□ 0.89
TIMP4-201ENST00000287814 FAM172AQ8WUF8 416 aa20.58■□□□□ 0.89
TIMP4-201ENST00000287814 C2orf42Q9NWW7 574 aa20.58■□□□□ 0.89
TIMP4-201ENST00000287814 TMEM191CA6NGB0 347 aa20.58■□□□□ 0.88
TIMP4-201ENST00000287814 PALM2-AKAP2B1ALY0 433 aaPredicted RBP20.58■□□□□ 0.88
TIMP4-201ENST00000287814 CCP110O43303 1012 aa20.58■□□□□ 0.88
TIMP4-201ENST00000287814 TBL1XO60907 577 aa20.58■□□□□ 0.88
TIMP4-201ENST00000287814 RNF40O75150 1001 aa20.58■□□□□ 0.88
TIMP4-201ENST00000287814 CHRM1P11229 460 aaPredicted RBP20.58■□□□□ 0.88
TIMP4-201ENST00000287814 GRIA2P42262 883 aa20.58■□□□□ 0.88
TIMP4-201ENST00000287814 EMC10Q5UCC4 262 aa20.58■□□□□ 0.88
TIMP4-201ENST00000287814 RNF43Q68DV7 783 aa20.58■□□□□ 0.88
TIMP4-201ENST00000287814 SND1Q7KZF4 910 aaKnown RBP eCLIP20.58■□□□□ 0.88
TIMP4-201ENST00000287814 STRADAQ7RTN6 431 aa20.58■□□□□ 0.88
TIMP4-201ENST00000287814 C14orf80Q86SX3 495 aa20.58■□□□□ 0.88
TIMP4-201ENST00000287814 CHSY1Q86X52 802 aa20.58■□□□□ 0.88
TIMP4-201ENST00000287814 EXOC4Q96A65 974 aa20.58■□□□□ 0.88
TIMP4-201ENST00000287814 SPTLC3Q9NUV7 552 aa20.58■□□□□ 0.88
TIMP4-201ENST00000287814 APODP05090 189 aa20.57■□□□□ 0.88
TIMP4-201ENST00000287814 MYBL1P10243 752 aa20.57■□□□□ 0.88
TIMP4-201ENST00000287814 DGKGP49619 791 aa20.57■□□□□ 0.88
TIMP4-201ENST00000287814 GALCP54803 685 aa20.57■□□□□ 0.88
TIMP4-201ENST00000287814 SEC13P55735 322 aa20.57■□□□□ 0.88
TIMP4-201ENST00000287814 ZNF252P-AS1Q0IIN9 211 aa20.57■□□□□ 0.88
TIMP4-201ENST00000287814 AUHQ13825 339 aaKnown RBP20.57■□□□□ 0.88
TIMP4-201ENST00000287814 ARTNQ5T4W7 220 aa20.57■□□□□ 0.88
TIMP4-201ENST00000287814 GRAMD4Q6IC98 578 aa20.57■□□□□ 0.88
TIMP4-201ENST00000287814 FBXL22Q6P050 247 aa20.57■□□□□ 0.88
TIMP4-201ENST00000287814 SYNPOQ8N3V7 929 aa20.57■□□□□ 0.88
TIMP4-201ENST00000287814 TERB1Q8NA31 727 aa20.57■□□□□ 0.88
TIMP4-201ENST00000287814 WFDC5Q8TCV5 224 aa20.57■□□□□ 0.88
TIMP4-201ENST00000287814 ARHGEF26Q96DR7 871 aa20.57■□□□□ 0.88
TIMP4-201ENST00000287814 TRIM11Q96F44 468 aa20.57■□□□□ 0.88
TIMP4-201ENST00000287814 DDX50Q9BQ39 737 aaKnown RBP20.57■□□□□ 0.88
TIMP4-201ENST00000287814 PACSIN1Q9BY11 444 aa20.57■□□□□ 0.88
TIMP4-201ENST00000287814 MAGEB5Q9BZ81 275 aa20.57■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 48.4 ms