RNA–Protein interactions for RNA: ENST00000286835.11

SCAF4-201, Transcript of SR-related CTD associated factor 4, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SCAF4, Length 4,193 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF4-201ENST00000286835 XPNPEP3Q9NQH7 507 aa13.78□□□□□ -0.2
SCAF4-201ENST00000286835 SSX2IPQ9Y2D8 614 aa13.78□□□□□ -0.2
SCAF4-201ENST00000286835 MAST2Q6P0Q8 1798 aa13.77□□□□□ -0.2
SCAF4-201ENST00000286835 F8W8V4 182 aa13.77□□□□□ -0.2
SCAF4-201ENST00000286835 VAV1P15498 845 aa13.77□□□□□ -0.2
SCAF4-201ENST00000286835 SNX16P57768 344 aa13.77□□□□□ -0.2
SCAF4-201ENST00000286835 TMEM62Q0P6H9 643 aa13.77□□□□□ -0.2
SCAF4-201ENST00000286835 GLRA4Q5JXX5 417 aa13.77□□□□□ -0.2
SCAF4-201ENST00000286835 PLD5Q8N7P1 536 aa13.77□□□□□ -0.2
SCAF4-201ENST00000286835 COLGALT1Q8NBJ5 622 aa13.77□□□□□ -0.2
SCAF4-201ENST00000286835 C7orf26Q96N11 449 aa13.77□□□□□ -0.2
SCAF4-201ENST00000286835 LGMNQ99538 433 aa13.77□□□□□ -0.2
SCAF4-201ENST00000286835 NT5C1AQ9BXI3 368 aa13.77□□□□□ -0.2
SCAF4-201ENST00000286835 SDR42E2A6NKP2 422 aa13.77□□□□□ -0.21
SCAF4-201ENST00000286835 ALDH1A3P47895 512 aa13.77□□□□□ -0.21
SCAF4-201ENST00000286835 SLC25A11Q02978 314 aaKnown RBP13.77□□□□□ -0.21
SCAF4-201ENST00000286835 STRA8Q7Z7C7 330 aa13.77□□□□□ -0.21
SCAF4-201ENST00000286835 SHKBP1Q8TBC3 707 aa13.77□□□□□ -0.21
SCAF4-201ENST00000286835 EXT2Q93063 718 aa13.77□□□□□ -0.21
SCAF4-201ENST00000286835 EBNA1BP2Q99848 306 aaKnown RBP13.77□□□□□ -0.21
SCAF4-201ENST00000286835 MED10Q9BTT4 135 aa13.77□□□□□ -0.21
SCAF4-201ENST00000286835 BFARQ9NZS9 450 aa13.77□□□□□ -0.21
SCAF4-201ENST00000286835 TEX264Q9Y6I9 313 aa13.77□□□□□ -0.21
SCAF4-201ENST00000286835 C15orf38-AP3S2A0A0A6YYH1 394 aa13.77□□□□□ -0.21
SCAF4-201ENST00000286835 CASQ2O14958 399 aaPredicted RBP13.77□□□□□ -0.21
SCAF4-201ENST00000286835 SUPT3HO75486 399 aa13.77□□□□□ -0.21
SCAF4-201ENST00000286835 UQCRBP14927 111 aa13.77□□□□□ -0.21
SCAF4-201ENST00000286835 CHN2P52757 468 aa13.77□□□□□ -0.21
SCAF4-201ENST00000286835 ARPINQ7Z6K5 226 aa13.77□□□□□ -0.21
SCAF4-201ENST00000286835 FBXO16Q8IX29 292 aaPredicted RBP13.77□□□□□ -0.21
SCAF4-201ENST00000286835 CHST13Q8NET6 341 aa13.77□□□□□ -0.21
SCAF4-201ENST00000286835 MOCOSQ96EN8 888 aa13.77□□□□□ -0.21
SCAF4-201ENST00000286835 CDCA5Q96FF9 252 aa13.77□□□□□ -0.21
SCAF4-201ENST00000286835 FAM167AQ96KS9 214 aa13.77□□□□□ -0.21
SCAF4-201ENST00000286835 PHF12Q96QT6 1004 aa13.77□□□□□ -0.21
SCAF4-201ENST00000286835 TWNKQ96RR1 684 aa13.77□□□□□ -0.21
SCAF4-201ENST00000286835 SPATC1LQ9H0A9 340 aa13.77□□□□□ -0.21
SCAF4-201ENST00000286835 GBA2Q9HCG7 927 aaPredicted RBP13.77□□□□□ -0.21
SCAF4-201ENST00000286835 LTBP4Q8N2S1 1624 aa13.77□□□□□ -0.21
SCAF4-201ENST00000286835 MYOCOSA0A1B0GUC4 107 aa13.76□□□□□ -0.21
SCAF4-201ENST00000286835 ASB14A6NK59 587 aa13.76□□□□□ -0.21
SCAF4-201ENST00000286835 TPST1O60507 370 aa13.76□□□□□ -0.21
SCAF4-201ENST00000286835 METTL18O95568 372 aa13.76□□□□□ -0.21
SCAF4-201ENST00000286835 EPHA3P29320 983 aa13.76□□□□□ -0.21
SCAF4-201ENST00000286835 ATXN1P54253 815 aaKnown RBP13.76□□□□□ -0.21
SCAF4-201ENST00000286835 EFCAB12Q6NXP0 572 aa13.76□□□□□ -0.21
SCAF4-201ENST00000286835 ABHD15Q6UXT9 468 aa13.76□□□□□ -0.21
SCAF4-201ENST00000286835 CCT7Q99832 543 aa13.76□□□□□ -0.21
SCAF4-201ENST00000286835 CAB39LQ9H9S4 337 aa13.76□□□□□ -0.21
SCAF4-201ENST00000286835 TCF7L2Q9NQB0 619 aa13.76□□□□□ -0.21
SCAF4-201ENST00000286835 CDH22Q9UJ99 828 aa13.76□□□□□ -0.21
SCAF4-201ENST00000286835 CDY2AQ9Y6F7 541 aa13.76□□□□□ -0.21
SCAF4-201ENST00000286835 CDY1Q9Y6F8 540 aa13.76□□□□□ -0.21
SCAF4-201ENST00000286835 CSPG5O95196 566 aa13.76□□□□□ -0.21
SCAF4-201ENST00000286835 TPH1P17752 444 aa13.76□□□□□ -0.21
SCAF4-201ENST00000286835 CA9Q16790 459 aa13.76□□□□□ -0.21
SCAF4-201ENST00000286835 TMEM192Q8IY95 271 aa13.76□□□□□ -0.21
SCAF4-201ENST00000286835 TDRD5Q8NAT2 981 aaKnown RBP13.76□□□□□ -0.21
SCAF4-201ENST00000286835 USP33Q8TEY7 942 aa13.76□□□□□ -0.21
SCAF4-201ENST00000286835 GCOM2Q9BZD3 368 aaPredicted RBP13.76□□□□□ -0.21
SCAF4-201ENST00000286835 AP4E1Q9UPM8 1137 aa13.76□□□□□ -0.21
SCAF4-201ENST00000286835 POLBP06746 335 aa13.76□□□□□ -0.21
SCAF4-201ENST00000286835 FAM200BP0CF97 657 aa13.76□□□□□ -0.21
SCAF4-201ENST00000286835 TMEM132DQ14C87 1099 aa13.76□□□□□ -0.21
SCAF4-201ENST00000286835 JADE1Q6IE81 842 aa13.76□□□□□ -0.21
SCAF4-201ENST00000286835 MPZL3Q6UWV2 235 aa13.76□□□□□ -0.21
SCAF4-201ENST00000286835 C15orf39Q6ZRI6 1047 aa13.76□□□□□ -0.21
SCAF4-201ENST00000286835 TFB1MQ8WVM0 346 aaKnown RBP13.76□□□□□ -0.21
SCAF4-201ENST00000286835 CYLDQ9NQC7 956 aa13.76□□□□□ -0.21
SCAF4-201ENST00000286835 DCDC2Q9UHG0 476 aa13.76□□□□□ -0.21
SCAF4-201ENST00000286835 CYTH4Q9UIA0 394 aa13.76□□□□□ -0.21
SCAF4-201ENST00000286835 LACTBL1A8MY62 500 aa13.75□□□□□ -0.21
SCAF4-201ENST00000286835 TRDMT1O14717 391 aaKnown RBP13.75□□□□□ -0.21
SCAF4-201ENST00000286835 STAG3L1P0CL83 205 aa13.75□□□□□ -0.21
SCAF4-201ENST00000286835 ZNF143P52747 638 aaPredicted RBP13.75□□□□□ -0.21
SCAF4-201ENST00000286835 WASHC5Q12768 1159 aa13.75□□□□□ -0.21
SCAF4-201ENST00000286835 SEPT6Q14141 434 aa13.75□□□□□ -0.21
SCAF4-201ENST00000286835 ANKRD20A4Q4UJ75 823 aa13.75□□□□□ -0.21
SCAF4-201ENST00000286835 TMCO4Q5TGY1 634 aa13.75□□□□□ -0.21
SCAF4-201ENST00000286835 PGLYRP2Q96PD5 576 aa13.75□□□□□ -0.21
SCAF4-201ENST00000286835 FAM96AQ9H5X1 160 aa13.75□□□□□ -0.21
SCAF4-201ENST00000286835 TLE6Q9H808 572 aa13.75□□□□□ -0.21
SCAF4-201ENST00000286835 GPBP1L1Q9HC44 474 aaPredicted RBP13.75□□□□□ -0.21
SCAF4-201ENST00000286835 TNRC6CQ9HCJ0 1690 aaKnown RBP13.75□□□□□ -0.21
SCAF4-201ENST00000286835 ARHGAP10A1A4S6 786 aa13.75□□□□□ -0.21
SCAF4-201ENST00000286835 NPM3O75607 178 aaKnown RBP13.75□□□□□ -0.21
SCAF4-201ENST00000286835 COX4I1P13073 169 aa13.75□□□□□ -0.21
SCAF4-201ENST00000286835 TFE3P19532 575 aaPredicted RBP13.75□□□□□ -0.21
SCAF4-201ENST00000286835 HDAC4P56524 1084 aa13.75□□□□□ -0.21
SCAF4-201ENST00000286835 SLC18A2Q05940 514 aa13.75□□□□□ -0.21
SCAF4-201ENST00000286835 DCAF6Q58WW2 860 aa13.75□□□□□ -0.21
SCAF4-201ENST00000286835 LRRC43Q8N309 656 aa13.75□□□□□ -0.21
SCAF4-201ENST00000286835 AZIN2Q96A70 460 aa13.75□□□□□ -0.21
SCAF4-201ENST00000286835 DTNBP1Q96EV8 351 aa13.75□□□□□ -0.21
SCAF4-201ENST00000286835 PIWIL1Q96J94 861 aaKnown RBP13.75□□□□□ -0.21
SCAF4-201ENST00000286835 NRDE2Q9H7Z3 1164 aa13.75□□□□□ -0.21
SCAF4-201ENST00000286835 IL1RL2Q9HB29 575 aa13.75□□□□□ -0.21
SCAF4-201ENST00000286835 CPA4Q9UI42 421 aa13.75□□□□□ -0.21
SCAF4-201ENST00000286835 POMPQ9Y244 141 aa13.75□□□□□ -0.21
SCAF4-201ENST00000286835 MYH9P35579 1960 aaKnown RBP13.75□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms