RNA–Protein interactions for RNA: ENST00000282516.12

NIPBL-201, Transcript of NIPBL, cohesin loading factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NIPBL, Length 10,435 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPBL-201ENST00000282516 ERMARDQ5T6L9 678 aa8.92□□□□□ -0.98
NIPBL-201ENST00000282516 R3HCC1LQ7Z5L2 792 aaKnown RBP8.92□□□□□ -0.98
NIPBL-201ENST00000282516 FBXO36Q8NEA4 188 aa8.92□□□□□ -0.98
NIPBL-201ENST00000282516 S100ZQ8WXG8 99 aa8.92□□□□□ -0.98
NIPBL-201ENST00000282516 PAIP1Q9H074 479 aaKnown RBP8.92□□□□□ -0.98
NIPBL-201ENST00000282516 THAP1Q9NVV9 213 aa8.92□□□□□ -0.98
NIPBL-201ENST00000282516 CLN6Q9NWW5 311 aa8.92□□□□□ -0.98
NIPBL-201ENST00000282516 TMCO1Q9UM00 188 aa8.92□□□□□ -0.98
NIPBL-201ENST00000282516 ITSN1Q15811 1721 aa8.92□□□□□ -0.98
NIPBL-201ENST00000282516 MBL2P11226 248 aaPredicted RBP8.92□□□□□ -0.98
NIPBL-201ENST00000282516 NPY2RP49146 381 aa8.92□□□□□ -0.98
NIPBL-201ENST00000282516 MTMR2Q13614 643 aa8.92□□□□□ -0.98
NIPBL-201ENST00000282516 LRRC34Q8IZ02 419 aa8.92□□□□□ -0.98
NIPBL-201ENST00000282516 UBE2E3Q969T4 207 aa8.92□□□□□ -0.98
NIPBL-201ENST00000282516 CRELD1Q96HD1 420 aa8.92□□□□□ -0.98
NIPBL-201ENST00000282516 WDCPQ9H6R7 721 aa8.92□□□□□ -0.98
NIPBL-201ENST00000282516 SLC9A8Q9Y2E8 581 aa8.92□□□□□ -0.98
NIPBL-201ENST00000282516 CITO14578 2027 aa8.92□□□□□ -0.98
NIPBL-201ENST00000282516 HOXA2O43364 376 aa8.92□□□□□ -0.98
NIPBL-201ENST00000282516 NMT2O60551 498 aa8.92□□□□□ -0.98
NIPBL-201ENST00000282516 SMIM11AP58511 58 aa8.92□□□□□ -0.98
NIPBL-201ENST00000282516 NAB1Q13506 487 aa8.92□□□□□ -0.98
NIPBL-201ENST00000282516 PYHIN1Q6K0P9 492 aa8.92□□□□□ -0.98
NIPBL-201ENST00000282516 XRRA1Q6P2D8 792 aa8.92□□□□□ -0.98
NIPBL-201ENST00000282516 PGBD2Q6P3X8 592 aa8.92□□□□□ -0.98
NIPBL-201ENST00000282516 OLFML1Q6UWY5 402 aa8.92□□□□□ -0.98
NIPBL-201ENST00000282516 C8orf59Q8N0T1 100 aaPredicted RBP8.92□□□□□ -0.98
NIPBL-201ENST00000282516 WDR60Q8WVS4 1066 aa8.92□□□□□ -0.98
NIPBL-201ENST00000282516 DLG3Q92796 817 aa8.92□□□□□ -0.98
NIPBL-201ENST00000282516 GPAMQ9HCL2 828 aa8.92□□□□□ -0.98
NIPBL-201ENST00000282516 CYP4F12Q9HCS2 524 aa8.92□□□□□ -0.98
NIPBL-201ENST00000282516 DCP1AQ9NPI6 582 aaPredicted RBP8.92□□□□□ -0.98
NIPBL-201ENST00000282516 DKK3Q9UBP4 350 aa8.92□□□□□ -0.98
NIPBL-201ENST00000282516 PLA2G4CQ9UP65 541 aa8.92□□□□□ -0.98
NIPBL-201ENST00000282516 HAT1O14929 419 aa8.92□□□□□ -0.98
NIPBL-201ENST00000282516 RECQL5O94762 991 aaPredicted RBP8.92□□□□□ -0.98
NIPBL-201ENST00000282516 APOC1P02654 83 aa8.92□□□□□ -0.98
NIPBL-201ENST00000282516 MYL9P24844 172 aa8.92□□□□□ -0.98
NIPBL-201ENST00000282516 CACNB3P54284 484 aa8.92□□□□□ -0.98
NIPBL-201ENST00000282516 ZNHIT3Q15649 155 aaPredicted RBP8.92□□□□□ -0.98
NIPBL-201ENST00000282516 OTUD3Q5T2D3 398 aaPredicted RBP8.92□□□□□ -0.98
NIPBL-201ENST00000282516 TMEM63BQ5T3F8 832 aa8.92□□□□□ -0.98
NIPBL-201ENST00000282516 CLVS1Q8IUQ0 354 aaPredicted RBP8.92□□□□□ -0.98
NIPBL-201ENST00000282516 CARNMT1Q8N4J0 409 aa8.92□□□□□ -0.98
NIPBL-201ENST00000282516 SLC9A6Q92581 669 aa8.92□□□□□ -0.98
NIPBL-201ENST00000282516 RPRD1AQ96P16 312 aaPredicted RBP8.92□□□□□ -0.98
NIPBL-201ENST00000282516 QRFPRQ96P65 431 aa8.92□□□□□ -0.98
NIPBL-201ENST00000282516 GPR101Q96P66 508 aaPredicted RBP8.92□□□□□ -0.98
NIPBL-201ENST00000282516 CHCHD6Q9BRQ6 235 aa8.92□□□□□ -0.98
NIPBL-201ENST00000282516 TUBA8Q9NY65 449 aaPredicted RBP8.92□□□□□ -0.98
NIPBL-201ENST00000282516 LIMD1Q9UGP4 676 aa8.92□□□□□ -0.98
NIPBL-201ENST00000282516 PZPP20742 1482 aa8.92□□□□□ -0.98
NIPBL-201ENST00000282516 CHRNGP07510 517 aa8.92□□□□□ -0.98
NIPBL-201ENST00000282516 ARFIP1P53367 373 aa8.92□□□□□ -0.98
NIPBL-201ENST00000282516 SNAPC2Q13487 334 aa8.92□□□□□ -0.98
NIPBL-201ENST00000282516 FASTKQ14296 549 aaKnown RBP8.92□□□□□ -0.98
NIPBL-201ENST00000282516 IQCF2Q8IXL9 164 aa8.92□□□□□ -0.98
NIPBL-201ENST00000282516 FAM118BQ9BPY3 351 aa8.92□□□□□ -0.98
NIPBL-201ENST00000282516 C1QTNF1Q9BXJ1 281 aa8.92□□□□□ -0.98
NIPBL-201ENST00000282516 NMRAL1Q9HBL8 299 aa8.92□□□□□ -0.98
NIPBL-201ENST00000282516 TMEM216Q9P0N5 145 aa8.92□□□□□ -0.98
NIPBL-201ENST00000282516 SLC24A2Q9UI40 661 aa8.92□□□□□ -0.98
NIPBL-201ENST00000282516 PALLDQ8WX93 1383 aa8.92□□□□□ -0.98
NIPBL-201ENST00000282516 PP2D1A8MPX8 630 aa8.92□□□□□ -0.98
NIPBL-201ENST00000282516 INTS11Q5TA45 600 aaKnown RBP8.92□□□□□ -0.98
NIPBL-201ENST00000282516 RASSF6Q6ZTQ3 369 aa8.92□□□□□ -0.98
NIPBL-201ENST00000282516 ZDHHC13Q8IUH4 622 aa8.92□□□□□ -0.98
NIPBL-201ENST00000282516 FNDC5Q8NAU1 212 aa8.92□□□□□ -0.98
NIPBL-201ENST00000282516 TRPV1Q8NER1 839 aa8.92□□□□□ -0.98
NIPBL-201ENST00000282516 MRPS31Q92665 395 aaKnown RBP8.92□□□□□ -0.98
NIPBL-201ENST00000282516 MMADHCQ9H3L0 296 aaPredicted RBP8.92□□□□□ -0.98
NIPBL-201ENST00000282516 CROCCQ5TZA2 2017 aa8.91□□□□□ -0.98
NIPBL-201ENST00000282516 TBX3O15119 743 aa8.91□□□□□ -0.98
NIPBL-201ENST00000282516 ACSL4O60488 711 aa8.91□□□□□ -0.98
NIPBL-201ENST00000282516 KRT33AO76009 404 aa8.91□□□□□ -0.98
NIPBL-201ENST00000282516 PRKAR2AP13861 404 aaKnown RBP8.91□□□□□ -0.98
NIPBL-201ENST00000282516 CLK3P49761 638 aaKnown RBP8.91□□□□□ -0.98
NIPBL-201ENST00000282516 ITGB3BPQ13352 177 aaPredicted RBP8.91□□□□□ -0.98
NIPBL-201ENST00000282516 BROXQ5VW32 411 aa8.91□□□□□ -0.98
NIPBL-201ENST00000282516 SLC26A11Q86WA9 606 aa8.91□□□□□ -0.98
NIPBL-201ENST00000282516 ARMC8Q8IUR7 673 aa8.91□□□□□ -0.98
NIPBL-201ENST00000282516 OR56A4Q8NGH8 313 aa8.91□□□□□ -0.98
NIPBL-201ENST00000282516 MAP10Q9P2G4 905 aa8.91□□□□□ -0.98
NIPBL-201ENST00000282516 GAS2O43903 313 aaKnown RBP8.91□□□□□ -0.98
NIPBL-201ENST00000282516 CCNT2O60583 730 aaKnown RBP8.91□□□□□ -0.98
NIPBL-201ENST00000282516 TDP2O95551 362 aa8.91□□□□□ -0.98
NIPBL-201ENST00000282516 GTF2H1P32780 548 aa8.91□□□□□ -0.98
NIPBL-201ENST00000282516 SLC26A3P40879 764 aa8.91□□□□□ -0.98
NIPBL-201ENST00000282516 KCNMA1Q12791 1236 aa8.91□□□□□ -0.98
NIPBL-201ENST00000282516 CYP2A13Q16696 494 aa8.91□□□□□ -0.98
NIPBL-201ENST00000282516 FAM126BQ8IXS8 530 aa8.91□□□□□ -0.98
NIPBL-201ENST00000282516 MCCC1Q96RQ3 725 aaPredicted RBP8.91□□□□□ -0.98
NIPBL-201ENST00000282516 INTS7Q9NVH2 962 aaKnown RBP8.91□□□□□ -0.98
NIPBL-201ENST00000282516 GTF3C4Q9UKN8 822 aa8.91□□□□□ -0.98
NIPBL-201ENST00000282516 CPDO75976 1380 aa8.91□□□□□ -0.98
NIPBL-201ENST00000282516 RRN3P2A6NIE6 340 aa8.91□□□□□ -0.98
NIPBL-201ENST00000282516 RGS14O43566 566 aa8.91□□□□□ -0.98
NIPBL-201ENST00000282516 SEC24AO95486 1093 aa8.91□□□□□ -0.98
NIPBL-201ENST00000282516 C6orf222P0C671 652 aaPredicted RBP8.91□□□□□ -0.98
NIPBL-201ENST00000282516 STAG3L1P0CL83 205 aa8.91□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms