RNA–Protein interactions for RNA: ENST00000276585.8

MRPS28-201, Transcript of mitochondrial ribosomal protein S28, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MRPS28, Length 850 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPS28-201ENST00000276585 PTPRNQ16849 979 aa12.91□□□□□ -0.34
MRPS28-201ENST00000276585 PKDCCQ504Y2 493 aa12.91□□□□□ -0.34
MRPS28-201ENST00000276585 HECTD3Q5T447 861 aa12.91□□□□□ -0.34
MRPS28-201ENST00000276585 BROXQ5VW32 411 aa12.91□□□□□ -0.34
MRPS28-201ENST00000276585 SCD5Q86SK9 330 aa12.91□□□□□ -0.34
MRPS28-201ENST00000276585 CCDC150Q8NCX0 1101 aa12.91□□□□□ -0.34
MRPS28-201ENST00000276585 KAT5Q92993 513 aa12.91□□□□□ -0.34
MRPS28-201ENST00000276585 ERLEC1Q96DZ1 483 aa12.91□□□□□ -0.34
MRPS28-201ENST00000276585 MED8Q96G25 268 aa12.91□□□□□ -0.34
MRPS28-201ENST00000276585 LGMNQ99538 433 aa12.91□□□□□ -0.34
MRPS28-201ENST00000276585 DUSP16Q9BY84 665 aa12.91□□□□□ -0.34
MRPS28-201ENST00000276585 METTL14Q9HCE5 456 aaKnown RBP12.91□□□□□ -0.34
MRPS28-201ENST00000276585 CYLDQ9NQC7 956 aa12.91□□□□□ -0.34
MRPS28-201ENST00000276585 ARHGEF4Q9NR80 690 aa12.91□□□□□ -0.34
MRPS28-201ENST00000276585 KIAA1468Q9P260 1216 aa12.91□□□□□ -0.34
MRPS28-201ENST00000276585 ANKMY1Q9P2S6 941 aa12.91□□□□□ -0.34
MRPS28-201ENST00000276585 SCML2Q9UQR0 700 aa12.91□□□□□ -0.34
MRPS28-201ENST00000276585 USP3Q9Y6I4 520 aa12.91□□□□□ -0.34
MRPS28-201ENST00000276585 UBR5O95071 2799 aaPredicted RBP12.91□□□□□ -0.34
MRPS28-201ENST00000276585 TULP2O00295 520 aa12.9□□□□□ -0.34
MRPS28-201ENST00000276585 TBX18O95935 607 aa12.9□□□□□ -0.34
MRPS28-201ENST00000276585 HOXB2P14652 356 aa12.9□□□□□ -0.34
MRPS28-201ENST00000276585 GRIA2P42262 883 aa12.9□□□□□ -0.34
MRPS28-201ENST00000276585 WASP42768 502 aa12.9□□□□□ -0.34
MRPS28-201ENST00000276585 TMPRSS3P57727 454 aa12.9□□□□□ -0.34
MRPS28-201ENST00000276585 LRMPQ12912 555 aa12.9□□□□□ -0.34
MRPS28-201ENST00000276585 CCDC40Q4G0X9 1142 aa12.9□□□□□ -0.34
MRPS28-201ENST00000276585 DBX2Q6ZNG2 339 aa12.9□□□□□ -0.34
MRPS28-201ENST00000276585 BHLHA9Q7RTU4 235 aa12.9□□□□□ -0.34
MRPS28-201ENST00000276585 TRMT11Q7Z4G4 463 aaKnown RBP12.9□□□□□ -0.34
MRPS28-201ENST00000276585 C12orf40Q86WS4 652 aa12.9□□□□□ -0.34
MRPS28-201ENST00000276585 TTC39CQ8N584 583 aa12.9□□□□□ -0.34
MRPS28-201ENST00000276585 NAF1Q96HR8 494 aaKnown RBP12.9□□□□□ -0.34
MRPS28-201ENST00000276585 ZSWIM1Q9BR11 485 aa12.9□□□□□ -0.34
MRPS28-201ENST00000276585 FAM117AQ9C073 453 aa12.9□□□□□ -0.34
MRPS28-201ENST00000276585 FBXO44Q9H4M3 255 aa12.9□□□□□ -0.34
MRPS28-201ENST00000276585 CPNE5Q9HCH3 593 aa12.9□□□□□ -0.34
MRPS28-201ENST00000276585 A0A1W2PQH9 124 aa12.89□□□□□ -0.35
MRPS28-201ENST00000276585 BICDL2A1A5D9 508 aa12.89□□□□□ -0.35
MRPS28-201ENST00000276585 MDM4O15151 490 aa12.89□□□□□ -0.35
MRPS28-201ENST00000276585 TLR5O60602 858 aa12.89□□□□□ -0.35
MRPS28-201ENST00000276585 GP1BBP13224 206 aa12.89□□□□□ -0.35
MRPS28-201ENST00000276585 ACTN2P35609 894 aa12.89□□□□□ -0.35
MRPS28-201ENST00000276585 GRK6P43250 576 aa12.89□□□□□ -0.35
MRPS28-201ENST00000276585 TNFRSF4P43489 277 aa12.89□□□□□ -0.35
MRPS28-201ENST00000276585 TARDBPQ13148 414 aaKnown RBP eCLIP12.89□□□□□ -0.352e-11■■■■■ 38.1
MRPS28-201ENST00000276585 DHCR24Q15392 516 aa12.89□□□□□ -0.35
MRPS28-201ENST00000276585 RAB41Q5JT25 222 aa12.89□□□□□ -0.35
MRPS28-201ENST00000276585 RHBDF2Q6PJF5 856 aa12.89□□□□□ -0.35
MRPS28-201ENST00000276585 CLEC17AQ6ZS10 378 aa12.89□□□□□ -0.35
MRPS28-201ENST00000276585 CCDC186Q7Z3E2 898 aa12.89□□□□□ -0.35
MRPS28-201ENST00000276585 DDX42Q86XP3 938 aaKnown RBP eCLIP12.89□□□□□ -0.35
MRPS28-201ENST00000276585 IRF2BP1Q8IU81 584 aa12.89□□□□□ -0.35
MRPS28-201ENST00000276585 ARHGEF19Q8IW93 802 aa12.89□□□□□ -0.35
MRPS28-201ENST00000276585 ADGRG2Q8IZP9 1017 aa12.89□□□□□ -0.35
MRPS28-201ENST00000276585 PHTF2Q8N3S3 785 aa12.89□□□□□ -0.35
MRPS28-201ENST00000276585 ZNF513Q8N8E2 541 aaPredicted RBP12.89□□□□□ -0.35
MRPS28-201ENST00000276585 P2RY11Q96G91 374 aa12.89□□□□□ -0.35
MRPS28-201ENST00000276585 HEXIM2Q96MH2 286 aaKnown RBP12.89□□□□□ -0.35
MRPS28-201ENST00000276585 KLF16Q9BXK1 252 aaPredicted RBP12.89□□□□□ -0.35
MRPS28-201ENST00000276585 NRSN2Q9GZP1 204 aa12.89□□□□□ -0.35
MRPS28-201ENST00000276585 CLSTN2Q9H4D0 955 aa12.89□□□□□ -0.35
MRPS28-201ENST00000276585 CD93Q9NPY3 652 aa12.89□□□□□ -0.35
MRPS28-201ENST00000276585 MTPAPQ9NVV4 582 aaKnown RBP eCLIP12.89□□□□□ -0.35
MRPS28-201ENST00000276585 FTSJ1Q9UET6 329 aa12.89□□□□□ -0.35
MRPS28-201ENST00000276585 E2F8A0AVK6 867 aa12.88□□□□□ -0.35
MRPS28-201ENST00000276585 TBC1D3BA6NDS4 549 aa12.88□□□□□ -0.35
MRPS28-201ENST00000276585 RNF225M0QZC1 329 aaPredicted RBP12.88□□□□□ -0.35
MRPS28-201ENST00000276585 O00370 1275 aa12.88□□□□□ -0.35
MRPS28-201ENST00000276585 BRINP1O60477 761 aa12.88□□□□□ -0.35
MRPS28-201ENST00000276585 CALCAP01258 141 aa12.88□□□□□ -0.35
MRPS28-201ENST00000276585 NDUFV2P19404 249 aa12.88□□□□□ -0.35
MRPS28-201ENST00000276585 ZNF132P52740 706 aa12.88□□□□□ -0.35
MRPS28-201ENST00000276585 RTP5Q14D33 572 aa12.88□□□□□ -0.35
MRPS28-201ENST00000276585 GOLGA7BQ2TAP0 167 aa12.88□□□□□ -0.35
MRPS28-201ENST00000276585 C6orf132Q5T0Z8 1188 aa12.88□□□□□ -0.35
MRPS28-201ENST00000276585 PIGZQ86VD9 579 aa12.88□□□□□ -0.35
MRPS28-201ENST00000276585 BBS7Q8IWZ6 715 aa12.88□□□□□ -0.35
MRPS28-201ENST00000276585 ANKRD52Q8NB46 1076 aa12.88□□□□□ -0.35
MRPS28-201ENST00000276585 TFAP2BQ92481 460 aa12.88□□□□□ -0.35
MRPS28-201ENST00000276585 KREMEN1Q96MU8 473 aa12.88□□□□□ -0.35
MRPS28-201ENST00000276585 SRRTQ9BXP5 876 aaKnown RBP12.88□□□□□ -0.35
MRPS28-201ENST00000276585 TLR8Q9NR97 1041 aaKnown RBP12.88□□□□□ -0.35
MRPS28-201ENST00000276585 KCNK4Q9NYG8 393 aa12.88□□□□□ -0.35
MRPS28-201ENST00000276585 NUDT5Q9UKK9 219 aa12.88□□□□□ -0.35
MRPS28-201ENST00000276585 TSPAN16Q9UKR8 245 aa12.88□□□□□ -0.35
MRPS28-201ENST00000276585 PALM2-AKAP2B1ALY0 433 aaPredicted RBP12.87□□□□□ -0.35
MRPS28-201ENST00000276585 BCAT2O15382 392 aaPredicted RBP12.87□□□□□ -0.35
MRPS28-201ENST00000276585 P4HA2O15460 535 aa12.87□□□□□ -0.35
MRPS28-201ENST00000276585 GABBR2O75899 941 aa12.87□□□□□ -0.35
MRPS28-201ENST00000276585 IRF1P10914 325 aa12.87□□□□□ -0.35
MRPS28-201ENST00000276585 RARGP13631 454 aa12.87□□□□□ -0.35
MRPS28-201ENST00000276585 TBXAS1P24557 533 aaPredicted RBP12.87□□□□□ -0.35
MRPS28-201ENST00000276585 EIF2DP41214 584 aaKnown RBP12.87□□□□□ -0.35
MRPS28-201ENST00000276585 UCNP55089 124 aa12.87□□□□□ -0.35
MRPS28-201ENST00000276585 BNC1Q01954 994 aa12.87□□□□□ -0.35
MRPS28-201ENST00000276585 PDE4CQ08493 712 aa12.87□□□□□ -0.35
MRPS28-201ENST00000276585 LY6G5CQ5SRR4 150 aa12.87□□□□□ -0.35
MRPS28-201ENST00000276585 KLHDC10Q6PID8 442 aa12.87□□□□□ -0.35
MRPS28-201ENST00000276585 KIAA1324Q6UXG2 1013 aaKnown RBP12.87□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms