RNA–Protein interactions for RNA: ENST00000274695.8

CDKAL1-201, Transcript of CDK5 regulatory subunit associated protein 1 like 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDKAL1, Length 3,272 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKAL1-201ENST00000274695 IWS1Q96ST2 819 aa6.4□□□□□ -1.38
CDKAL1-201ENST00000274695 PRMT1Q99873 361 aaKnown RBP6.4□□□□□ -1.38
CDKAL1-201ENST00000274695 FAM192AQ9GZU8 254 aa6.4□□□□□ -1.38
CDKAL1-201ENST00000274695 CDC42EP4Q9H3Q1 356 aaKnown RBP6.4□□□□□ -1.38
CDKAL1-201ENST00000274695 ECT2Q9H8V3 914 aa6.4□□□□□ -1.38
CDKAL1-201ENST00000274695 STARD7Q9NQZ5 370 aa6.4□□□□□ -1.38
CDKAL1-201ENST00000274695 MTRF1LQ9UGC7 380 aaKnown RBP6.4□□□□□ -1.38
CDKAL1-201ENST00000274695 DBR1Q9UK59 544 aaKnown RBP6.4□□□□□ -1.38
CDKAL1-201ENST00000274695 ALG6Q9Y672 507 aa6.4□□□□□ -1.38
CDKAL1-201ENST00000274695 PASKQ96RG2 1323 aa6.4□□□□□ -1.39
CDKAL1-201ENST00000274695 TCRBV5S1A1TA0A578 114 aa6.4□□□□□ -1.39
CDKAL1-201ENST00000274695 BTBD19C9JJ37 291 aa6.4□□□□□ -1.39
CDKAL1-201ENST00000274695 EDF1O60869 148 aaKnown RBP6.4□□□□□ -1.39
CDKAL1-201ENST00000274695 UNGP13051 313 aaPredicted RBP6.4□□□□□ -1.39
CDKAL1-201ENST00000274695 PECAM1P16284 738 aaPredicted RBP6.4□□□□□ -1.39
CDKAL1-201ENST00000274695 PSMC4P43686 418 aa6.4□□□□□ -1.39
CDKAL1-201ENST00000274695 CCNHP51946 323 aaPredicted RBP6.4□□□□□ -1.39
CDKAL1-201ENST00000274695 ROR2Q01974 943 aaKnown RBP6.4□□□□□ -1.39
CDKAL1-201ENST00000274695 SMAD1Q15797 465 aaKnown RBP6.4□□□□□ -1.39
CDKAL1-201ENST00000274695 USP41Q3LFD5 358 aa6.4□□□□□ -1.39
CDKAL1-201ENST00000274695 CT83Q5H943 113 aa6.4□□□□□ -1.39
CDKAL1-201ENST00000274695 CWF19L1Q69YN2 538 aaKnown RBP6.4□□□□□ -1.39
CDKAL1-201ENST00000274695 PPP1R2P3Q6NXS1 205 aa6.4□□□□□ -1.39
CDKAL1-201ENST00000274695 RFX8Q6ZV50 586 aa6.4□□□□□ -1.39
CDKAL1-201ENST00000274695 RTN4RL1Q86UN2 441 aaPredicted RBP6.4□□□□□ -1.39
CDKAL1-201ENST00000274695 TRABD2AQ86V40 505 aa6.4□□□□□ -1.39
CDKAL1-201ENST00000274695 GPBP1Q86WP2 473 aa6.4□□□□□ -1.39
CDKAL1-201ENST00000274695 KLHL7Q8IXQ5 586 aa6.4□□□□□ -1.39
CDKAL1-201ENST00000274695 ZCCHC9Q8N567 271 aaKnown RBP6.4□□□□□ -1.39
CDKAL1-201ENST00000274695 MARCH10Q8NA82 808 aaPredicted RBP6.4□□□□□ -1.39
CDKAL1-201ENST00000274695 NPLOC4Q8TAT6 608 aa6.4□□□□□ -1.39
CDKAL1-201ENST00000274695 UBLCP1Q8WVY7 318 aaPredicted RBP6.4□□□□□ -1.39
CDKAL1-201ENST00000274695 COPS5Q92905 334 aa6.4□□□□□ -1.39
CDKAL1-201ENST00000274695 ZNF333Q96JL9 665 aa6.4□□□□□ -1.39
CDKAL1-201ENST00000274695 HAPLN3Q96S86 360 aa6.4□□□□□ -1.39
CDKAL1-201ENST00000274695 INTS2Q9H0H0 1204 aaKnown RBP6.4□□□□□ -1.39
CDKAL1-201ENST00000274695 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP6.4□□□□□ -1.39
CDKAL1-201ENST00000274695 AZI2Q9H6S1 392 aa6.4□□□□□ -1.39
CDKAL1-201ENST00000274695 DNAJC18Q9H819 358 aa6.4□□□□□ -1.39
CDKAL1-201ENST00000274695 OBP2BQ9NPH6 170 aa6.4□□□□□ -1.39
CDKAL1-201ENST00000274695 KRT82Q9NSB4 513 aa6.4□□□□□ -1.39
CDKAL1-201ENST00000274695 SDAD1Q9NVU7 687 aaKnown RBP eCLIP6.4□□□□□ -1.39
CDKAL1-201ENST00000274695 ZNF281Q9Y2X9 895 aa6.4□□□□□ -1.39
CDKAL1-201ENST00000274695 SPO11Q9Y5K1 396 aa6.4□□□□□ -1.39
CDKAL1-201ENST00000274695 PDCD11Q14690 1871 aaKnown RBP6.4□□□□□ -1.39
CDKAL1-201ENST00000274695 UMODL1Q5DID0 1318 aa6.39□□□□□ -1.39
CDKAL1-201ENST00000274695 TSC2P49815 1807 aa6.39□□□□□ -1.39
CDKAL1-201ENST00000274695 MGAMO43451 1857 aa6.39□□□□□ -1.39
CDKAL1-201ENST00000274695 ANKRD63C9JTQ0 380 aa6.39□□□□□ -1.39
CDKAL1-201ENST00000274695 RASGRF2O14827 1237 aa6.39□□□□□ -1.39
CDKAL1-201ENST00000274695 RGS16O15492 202 aaPredicted RBP6.39□□□□□ -1.39
CDKAL1-201ENST00000274695 MYBL1P10243 752 aa6.39□□□□□ -1.39
CDKAL1-201ENST00000274695 NEFHP12036 1026 aa6.39□□□□□ -1.39
CDKAL1-201ENST00000274695 GM2AP17900 193 aa6.39□□□□□ -1.39
CDKAL1-201ENST00000274695 PAX7P23759 505 aa6.39□□□□□ -1.39
CDKAL1-201ENST00000274695 GPC5P78333 572 aa6.39□□□□□ -1.39
CDKAL1-201ENST00000274695 POLD3Q15054 466 aaPredicted RBP6.39□□□□□ -1.39
CDKAL1-201ENST00000274695 GRIK5Q16478 980 aa6.39□□□□□ -1.39
CDKAL1-201ENST00000274695 PKN2Q16513 984 aaKnown RBP6.39□□□□□ -1.39
CDKAL1-201ENST00000274695 C3orf36Q3SXR2 165 aa6.39□□□□□ -1.39
CDKAL1-201ENST00000274695 PRAMEF13Q5VWM6 474 aa6.39□□□□□ -1.39
CDKAL1-201ENST00000274695 RINT1Q6NUQ1 792 aa6.39□□□□□ -1.39
CDKAL1-201ENST00000274695 PGBD2Q6P3X8 592 aa6.39□□□□□ -1.39
CDKAL1-201ENST00000274695 CPLX4Q7Z7G2 160 aa6.39□□□□□ -1.39
CDKAL1-201ENST00000274695 DAAM2Q86T65 1068 aa6.39□□□□□ -1.39
CDKAL1-201ENST00000274695 ZNF444Q8N0Y2 327 aaPredicted RBP6.39□□□□□ -1.39
CDKAL1-201ENST00000274695 CCDC33Q8N5R6 958 aa6.39□□□□□ -1.39
CDKAL1-201ENST00000274695 UBL4BQ8N7F7 174 aa6.39□□□□□ -1.39
CDKAL1-201ENST00000274695 MDM1Q8TC05 714 aa6.39□□□□□ -1.39
CDKAL1-201ENST00000274695 VCPIP1Q96JH7 1222 aa6.39□□□□□ -1.39
CDKAL1-201ENST00000274695 RMDN2Q96LZ7 410 aa6.39□□□□□ -1.39
CDKAL1-201ENST00000274695 CORO1BQ9BR76 489 aa6.39□□□□□ -1.39
CDKAL1-201ENST00000274695 FRMD8P1Q9BZ68 369 aaPredicted RBP6.39□□□□□ -1.39
CDKAL1-201ENST00000274695 FBXL7Q9UJT9 491 aa6.39□□□□□ -1.39
CDKAL1-201ENST00000274695 SMG5Q9UPR3 1016 aaKnown RBP6.39□□□□□ -1.39
CDKAL1-201ENST00000274695 DOCK1Q14185 1865 aa6.39□□□□□ -1.39
CDKAL1-201ENST00000274695 PLXNA1Q9UIW2 1896 aa6.39□□□□□ -1.39
CDKAL1-201ENST00000274695 E9PMD0 336 aa6.39□□□□□ -1.39
CDKAL1-201ENST00000274695 IGF2BP3O00425 579 aaKnown RBP eCLIP6.39□□□□□ -1.39
CDKAL1-201ENST00000274695 PSTPIP1O43586 416 aa6.39□□□□□ -1.39
CDKAL1-201ENST00000274695 CDH16O75309 829 aa6.39□□□□□ -1.39
CDKAL1-201ENST00000274695 PENKP01210 267 aaPredicted RBP6.39□□□□□ -1.39
CDKAL1-201ENST00000274695 C1QAP02745 245 aa6.39□□□□□ -1.39
CDKAL1-201ENST00000274695 CYP1A1P04798 512 aaPredicted RBP6.39□□□□□ -1.39
CDKAL1-201ENST00000274695 GSNP06396 782 aa6.39□□□□□ -1.39
CDKAL1-201ENST00000274695 ALDH9A1P49189 494 aa6.39□□□□□ -1.39
CDKAL1-201ENST00000274695 NCKAP1LP55160 1127 aa6.39□□□□□ -1.39
CDKAL1-201ENST00000274695 SNX16P57768 344 aa6.39□□□□□ -1.39
CDKAL1-201ENST00000274695 BFSP1Q12934 665 aa6.39□□□□□ -1.39
CDKAL1-201ENST00000274695 SNX17Q15036 470 aa6.39□□□□□ -1.39
CDKAL1-201ENST00000274695 POU4F3Q15319 338 aa6.39□□□□□ -1.39
CDKAL1-201ENST00000274695 CBWD6Q4V339 395 aa6.39□□□□□ -1.39
CDKAL1-201ENST00000274695 CBWD3Q5JTY5 395 aa6.39□□□□□ -1.39
CDKAL1-201ENST00000274695 CBWD5Q5RIA9 395 aa6.39□□□□□ -1.39
CDKAL1-201ENST00000274695 TBC1D9BQ66K14 1250 aa6.39□□□□□ -1.39
CDKAL1-201ENST00000274695 SFR1Q86XK3 245 aa6.39□□□□□ -1.39
CDKAL1-201ENST00000274695 ARL10Q8N8L6 244 aa6.39□□□□□ -1.39
CDKAL1-201ENST00000274695 ZNF610Q8N9Z0 462 aa6.39□□□□□ -1.39
CDKAL1-201ENST00000274695 SLC17A8Q8NDX2 589 aa6.39□□□□□ -1.39
CDKAL1-201ENST00000274695 HTRA1Q92743 480 aa6.39□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms